LOCUS       NM_001108283             564 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ribosomal protein L23A (Rpl23a), mRNA.
ACCESSION   NM_001108283 XM_001059934 XM_001060002 XM_001080777 XM_001080779
VERSION     NM_001108283.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 564)
  AUTHORS   Guo,Z., Neilson,L.J., Zhong,H., Murray,P.S., Zanivan,S. and
            Zaidel-Bar,R.
  TITLE     E-cadherin interactome complexity and robustness resolved by
            quantitative proteomics
  JOURNAL   Sci Signal 7 (354), rs7 (2014)
   PUBMED   25468996
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 564)
  AUTHORS   Anger,A.M., Armache,J.P., Berninghausen,O., Habeck,M., Subklewe,M.,
            Wilson,D.N. and Beckmann,R.
  TITLE     Structures of the human and Drosophila 80S ribosome
  JOURNAL   Nature 497 (7447), 80-85 (2013)
   PUBMED   23636399
REFERENCE   3  (bases 1 to 564)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   4  (bases 1 to 564)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   5  (bases 1 to 564)
  AUTHORS   Oh,W.J., Wu,C.C., Kim,S.J., Facchinetti,V., Julien,L.A., Finlan,M.,
            Roux,P.P., Su,B. and Jacinto,E.
  TITLE     mTORC2 can associate with ribosomes to promote cotranslational
            phosphorylation and stability of nascent Akt polypeptide
  JOURNAL   EMBO J 29 (23), 3939-3951 (2010)
   PUBMED   21045808
REFERENCE   6  (bases 1 to 564)
  AUTHORS   Jakel,S. and Gorlich,D.
  TITLE     Importin beta, transportin, RanBP5 and RanBP7 mediate nuclear
            import of ribosomal proteins in mammalian cells
  JOURNAL   EMBO J 17 (15), 4491-4502 (1998)
   PUBMED   9687515
REFERENCE   7  (bases 1 to 564)
  AUTHORS   Jiang,H., Lin,J.J., Tao,J. and Fisher,P.B.
  TITLE     Suppression of human ribosomal protein L23A expression during cell
            growth inhibition by interferon-beta
  JOURNAL   Oncogene 14 (4), 473-480 (1997)
   PUBMED   9053844
REFERENCE   8  (bases 1 to 564)
  AUTHORS   Suzuki,K. and Wool,I.G.
  TITLE     The primary structure of rat ribosomal protein L23a. The
            application of homology search to the identification of genes for
            mammalian and yeast ribosomal proteins and a correlation of rat and
            yeast ribosomal proteins
  JOURNAL   J Biol Chem 268 (4), 2755-2761 (1993)
   PUBMED   8428950
REFERENCE   9  (bases 1 to 564)
  AUTHORS   Laine,R.O., Laipis,P.J., Shay,N.F. and Kilberg,M.S.
  TITLE     Identification of an amino acid-regulated mRNA from rat liver as
            the mammalian equivalent of bacterial ribosomal protein L22
  JOURNAL   J Biol Chem 266 (26), 16969-16972 (1991)
   PUBMED   1894596
REFERENCE   10 (bases 1 to 564)
  AUTHORS   Buisson,M. and Reboud,A.M.
  TITLE     Carbodiimide-induced protein--RNA crosslinking in mammalian
            ribosomal subunits
  JOURNAL   FEBS Lett 148 (2), 247-250 (1982)
   PUBMED   6759166
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473948.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001060002.1, XM_001059934.1, XM_001080777.1, XM_001080779.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ228299.1, FQ210899.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760393, SAMN06621351
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q25"
     gene            1..564
                     /gene="Rpl23a"
                     /note="ribosomal protein L23A"
                     /db_xref="GeneID:360572"
                     /db_xref="RGD:1304897"
     exon            1..62
                     /gene="Rpl23a"
                     /inference="alignment:Splign:2.1.0"
     CDS             38..508
                     /gene="Rpl23a"
                     /note="60S ribosomal protein L23a"
                     /codon_start=1
                     /product="large ribosomal subunit protein uL23"
                     /protein_id="NP_001101753.1"
                     /db_xref="GeneID:360572"
                     /db_xref="RGD:1304897"
                     /translation="MAPKAKKEAPAPPKAEAKAKALKAKKAVLKGVHSHKKKKIRTSP
                     TFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDV
                     KANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII"
     exon            63..246
                     /gene="Rpl23a"
                     /inference="alignment:Splign:2.1.0"
     exon            247..423
                     /gene="Rpl23a"
                     /inference="alignment:Splign:2.1.0"
     exon            424..493
                     /gene="Rpl23a"
                     /inference="alignment:Splign:2.1.0"
     exon            494..564
                     /gene="Rpl23a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctcatgggaa tgaggctggg taaccctttt cgccaagatg gcgccgaaag cgaagaagga
       61 agctcctgcc cctcccaaag ccgaagccaa agcgaaggcc ttgaaagcta agaaggcagt
      121 gctgaaaggt gtccacagtc acaaaaagaa gaagatccga acgtcaccca ctttccggcg
      181 gcccaagacc ctgcggctcc ggaggcagcc aaaatatcct cgaaagagtg cacccaggag
      241 aaacaagctt gaccactatg ctatcatcaa attcccactg accaccgagt cagctatgaa
      301 gaaaatagag gacaacaaca cgcttgtgtt cattgtggat gttaaggcca acaagcacca
      361 gatcaaacag gccgtgaaaa aactctatga tatagatgtg gccaaagtca atactctgat
      421 acggcctgac ggagagaaga aggcatatgt tcgcttggct cctgattatg atgctctaga
      481 tgttgccaac aagattggga tcatctaaag tgagtccaga tggttaattc taaatatata
      541 ctttttttcc accataaata atgc
//
