LOCUS       NM_001007599             518 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus ribosomal protein L23 (Rpl23), mRNA.
ACCESSION   NM_001007599 XM_213448
VERSION     NM_001007599.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   Voorhees,R.M., Fernandez,I.S., Scheres,S.H. and Hegde,R.S.
  TITLE     Structure of the mammalian ribosome-Sec61 complex to 3.4 A
            resolution
  JOURNAL   Cell 157 (7), 1632-1643 (2014)
   PUBMED   24930395
REFERENCE   2  (bases 1 to 518)
  AUTHORS   Zanivan,S., Maione,F., Hein,M.Y., Hernandez-Fernaud,J.R.,
            Ostasiewicz,P., Giraudo,E. and Mann,M.
  TITLE     SILAC-based proteomics of human primary endothelial cell
            morphogenesis unveils tumor angiogenic markers
  JOURNAL   Mol Cell Proteomics 12 (12), 3599-3611 (2013)
   PUBMED   23979707
REFERENCE   3  (bases 1 to 518)
  AUTHORS   Anger,A.M., Armache,J.P., Berninghausen,O., Habeck,M., Subklewe,M.,
            Wilson,D.N. and Beckmann,R.
  TITLE     Structures of the human and Drosophila 80S ribosome
  JOURNAL   Nature 497 (7447), 80-85 (2013)
   PUBMED   23636399
REFERENCE   4  (bases 1 to 518)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   5  (bases 1 to 518)
  AUTHORS   Kuo,J.C., Han,X., Hsiao,C.T., Yates,J.R. 3rd and Waterman,C.M.
  TITLE     Analysis of the myosin-II-responsive focal adhesion proteome
            reveals a role for beta-Pix in negative regulation of focal
            adhesion maturation
  JOURNAL   Nat Cell Biol 13 (4), 383-393 (2011)
   PUBMED   21423176
REFERENCE   6  (bases 1 to 518)
  AUTHORS   Odintsova,T.I., Muller,E.C., Ivanov,A.V., Egorov,T.A., Bienert,R.,
            Vladimirov,S.N., Kostka,S., Otto,A., Wittmann-Liebold,B. and
            Karpova,G.G.
  TITLE     Characterization and analysis of posttranslational modifications of
            the human large cytoplasmic ribosomal subunit proteins by mass
            spectrometry and Edman sequencing
  JOURNAL   J Protein Chem 22 (3), 249-258 (2003)
   PUBMED   12962325
REFERENCE   7  (bases 1 to 518)
  AUTHORS   Plafker,S.M. and Macara,I.G.
  TITLE     Ribosomal protein L12 uses a distinct nuclear import pathway
            mediated by importin 11
  JOURNAL   Mol Cell Biol 22 (4), 1266-1275 (2002)
   PUBMED   11809816
REFERENCE   8  (bases 1 to 518)
  AUTHORS   Chan,Y.L., Paz,V. and Wool,I.G.
  TITLE     The primary structure of rat ribosomal protein L23
  JOURNAL   Biochem Biophys Res Commun 178 (3), 1153-1159 (1991)
   PUBMED   1840488
REFERENCE   9  (bases 1 to 518)
  AUTHORS   Hultin,T.
  TITLE     Selective high-efficiency cross-linking of mammalian ribosomal
            proteins with cleavable thiol-directed heterobifunctional reagents:
            identification and binding directions of major protein complexes
  JOURNAL   Biochim Biophys Acta 872 (3), 226-235 (1986)
   PUBMED   3730400
REFERENCE   10 (bases 1 to 518)
  AUTHORS   Uchiumi,T., Terao,K. and Ogata,K.
  TITLE     Identification of neighboring protein pairs in rat liver 60S
            ribosomal subunits cross-linked with dimethyl suberimidate or
            dimethyl 3,3'-dithiobispropionimidate
  JOURNAL   J Biochem 88 (4), 1033-1044 (1980)
   PUBMED   7451403
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC058500.1.
            
            On Aug 30, 2012 this sequence version replaced NM_001007599.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC058500.1, FQ221693.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132292, SAMD00132301
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-518               BC058500.1         5-522
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q31"
     gene            1..518
                     /gene="Rpl23"
                     /gene_synonym="RL23a"
                     /note="ribosomal protein L23"
                     /db_xref="GeneID:29282"
                     /db_xref="RGD:62067"
     exon            1..34
                     /gene="Rpl23"
                     /gene_synonym="RL23a"
                     /inference="alignment:Splign:2.1.0"
     CDS             22..444
                     /gene="Rpl23"
                     /gene_synonym="RL23a"
                     /note="60S ribosomal protein L23"
                     /codon_start=1
                     /product="large ribosomal subunit protein uL14"
                     /protein_id="NP_001007600.1"
                     /db_xref="GeneID:29282"
                     /db_xref="RGD:62067"
                     /translation="MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKG
                     IKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA
                     GVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSIA"
     exon            35..118
                     /gene="Rpl23"
                     /gene_synonym="RL23a"
                     /inference="alignment:Splign:2.1.0"
     exon            119..247
                     /gene="Rpl23"
                     /gene_synonym="RL23a"
                     /inference="alignment:Splign:2.1.0"
     exon            248..361
                     /gene="Rpl23"
                     /gene_synonym="RL23a"
                     /inference="alignment:Splign:2.1.0"
     exon            362..488
                     /gene="Rpl23"
                     /gene_synonym="RL23a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gactctttcc ggacgctcaa gatgtcgaag cgaggacgtg gtgggtcctc cggagcgaaa
       61 ttccggattt ccctgggtct tccggtagga gctgtgatca actgtgctga caacacagga
      121 gccaaaaacc tgtatatcat ctctgtgaag ggaatcaagg gacggctgaa cagacttcct
      181 gctgctggtg tgggcgacat ggtgatggcc acagttaaga aaggcaaacc agaactaagg
      241 aaaaaggtac atcctgcagt ggtgattcga caacgaaagt catatcgaag aaaagacggg
      301 gtgttccttt attttgaaga taatgcaggg gtcatagtaa acaataaagg cgagatgaaa
      361 ggttctgcta tcacaggtcc agttgcaaag gagtgtgcag acttgtggcc caggattgca
      421 tccaatgcag gaagcattgc ctgattctcc agtgtgtttg taaaatatat tcattaaagt
      481 cttctctcaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//
