LOCUS       NM_031104               1883 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ribosomal protein L22 (Rpl22), mRNA.
ACCESSION   NM_031104
VERSION     NM_031104.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1883)
  AUTHORS   Shigeoka,T., Jung,H., Jung,J., Turner-Bridger,B., Ohk,J., Lin,J.Q.,
            Amieux,P.S. and Holt,C.E.
  TITLE     Dynamic Axonal Translation in Developing and Mature Visual Circuits
  JOURNAL   Cell 166 (1), 181-192 (2016)
   PUBMED   27321671
REFERENCE   2  (bases 1 to 1883)
  AUTHORS   Voorhees,R.M., Fernandez,I.S., Scheres,S.H. and Hegde,R.S.
  TITLE     Structure of the mammalian ribosome-Sec61 complex to 3.4 A
            resolution
  JOURNAL   Cell 157 (7), 1632-1643 (2014)
   PUBMED   24930395
REFERENCE   3  (bases 1 to 1883)
  AUTHORS   Zanivan,S., Maione,F., Hein,M.Y., Hernandez-Fernaud,J.R.,
            Ostasiewicz,P., Giraudo,E. and Mann,M.
  TITLE     SILAC-based proteomics of human primary endothelial cell
            morphogenesis unveils tumor angiogenic markers
  JOURNAL   Mol Cell Proteomics 12 (12), 3599-3611 (2013)
   PUBMED   23979707
REFERENCE   4  (bases 1 to 1883)
  AUTHORS   Anger,A.M., Armache,J.P., Berninghausen,O., Habeck,M., Subklewe,M.,
            Wilson,D.N. and Beckmann,R.
  TITLE     Structures of the human and Drosophila 80S ribosome
  JOURNAL   Nature 497 (7447), 80-85 (2013)
   PUBMED   23636399
REFERENCE   5  (bases 1 to 1883)
  AUTHORS   Todd,M.A. and Picketts,D.J.
  TITLE     PHF6 interacts with the nucleosome remodeling and deacetylation
            (NuRD) complex
  JOURNAL   J Proteome Res 11 (8), 4326-4337 (2012)
   PUBMED   22720776
REFERENCE   6  (bases 1 to 1883)
  AUTHORS   Odintsova,T.I., Muller,E.C., Ivanov,A.V., Egorov,T.A., Bienert,R.,
            Vladimirov,S.N., Kostka,S., Otto,A., Wittmann-Liebold,B. and
            Karpova,G.G.
  TITLE     Characterization and analysis of posttranslational modifications of
            the human large cytoplasmic ribosomal subunit proteins by mass
            spectrometry and Edman sequencing
  JOURNAL   J Protein Chem 22 (3), 249-258 (2003)
   PUBMED   12962325
REFERENCE   7  (bases 1 to 1883)
  AUTHORS   Chan,Y.L. and Wool,I.G.
  TITLE     The primary structure of rat ribosomal protein L22
  JOURNAL   Biochim Biophys Acta 1260 (1), 113-115 (1995)
   PUBMED   7999786
REFERENCE   8  (bases 1 to 1883)
  AUTHORS   Chan,Y.L., Olvera,J. and Wool,I.G.
  TITLE     The primary structure of rat ribosomal protein L24
  JOURNAL   Biochem Biophys Res Commun 202 (2), 1176-1180 (1994)
   PUBMED   8048931
REFERENCE   9  (bases 1 to 1883)
  AUTHORS   Fujita,Y., Okamoto,T., Noshiro,M., McKeehan,W.L., Crabb,J.W.,
            Whitney,R.G., Kato,Y., Sato,J.D. and Takada,K.
  TITLE     A novel heparin-binding protein, HBp15, is identified as mammalian
            ribosomal protein L22
  JOURNAL   Biochem Biophys Res Commun 199 (2), 706-713 (1994)
   PUBMED   8135813
REFERENCE   10 (bases 1 to 1883)
  AUTHORS   Tsurugi,K., Collatz,E., Wool,E.G. and Lin,A.
  TITLE     Isolation of eukaryotic ribosomal proteins. Purification and
            characterization of the 60 S ribosomal subunit proteins L4, L5, L7,
            L9, L11, L12, L13, L21, L22, L23, L26, L27, L30, L33, L35', L37,
            and L39
  JOURNAL   J Biol Chem 251 (24), 7940-7946 (1976)
   PUBMED   1002715
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Jun 29, 2022 this sequence version replaced NM_031104.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22399492.821326.1,
                                           SRR26643294.23925.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-35                JAXUCZ010000005.1  168117961-168117995
            36-140              JAXUCZ010000005.1  168119528-168119632
            141-265             JAXUCZ010000005.1  168121917-168122041
            266-1883            JAXUCZ010000005.1  168124497-168126114
FEATURES             Location/Qualifiers
     source          1..1883
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1883
                     /gene="Rpl22"
                     /note="ribosomal protein L22"
                     /db_xref="GeneID:81768"
                     /db_xref="RGD:621189"
     exon            1..35
                     /gene="Rpl22"
                     /inference="alignment:Splign:2.1.0"
     CDS             24..410
                     /gene="Rpl22"
                     /EC_number="2.1.1.100"
                     /note="60S ribosomal protein L22"
                     /codon_start=1
                     /product="large ribosomal subunit protein eL22"
                     /protein_id="NP_112366.2"
                     /db_xref="GeneID:81768"
                     /db_xref="RGD:621189"
                     /translation="MAPVKKLVAKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQ
                     ERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRV
                     VANSKESYELRYFQINQDEEEEEDED"
     exon            36..140
                     /gene="Rpl22"
                     /inference="alignment:Splign:2.1.0"
     exon            141..265
                     /gene="Rpl22"
                     /inference="alignment:Splign:2.1.0"
     exon            266..1883
                     /gene="Rpl22"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccctttctgc ctcctctgcc gccatggcgc ctgtgaaaaa gcttgtggcg aaggggggca
       61 aaaaaaagaa gcaggttttg aagttcaccc ttgactgcac tcaccctgta gaagatggaa
      121 tcatggatgc tgccaatttt gagcagttcc tccaggagag gatcaaggtg aacgggaaag
      181 ctggtaacct tggcggaggg gttgtgacca tcgagcggag caagagcaag atcactgtca
      241 cttccgaggt gcctttctcc aaaaggtatt tgaaatatct caccaaaaaa tatttgaaga
      301 agaacaacct ccgagactgg ctgcgcgtcg ttgccaacag caaggagagc tacgagctgc
      361 gctacttcca gatcaaccag gacgaggagg aggaggagga cgaggattaa gacacattgg
      421 tctgccatgt tttgtattaa ttcataaata aaatttagga acaaaacccg gtggtttatc
      481 cttgcatctc tgcagtgtgg gttggacagg gttggaaaga caggactggg gtttaactgg
      541 gctgctgctc gcttgtacat agacagtttt ctctgctcag aaatgtcagt tctccagtcg
      601 tgatgtccga acagaagagc caggctcagg ggctgcatct gacactgagc aagtggacta
      661 gagggacggt cgtgaactct gaccagcctg agtcttacag aacctggtgc ttggttgttt
      721 tatctggtgc ctgtcacaaa ggaaggtttg agatacagtg tggtgctcct cagaagcaaa
      781 caggtgattt ctttatgtga ttcccacccc caggaaaatg gcagccagta agacaggttt
      841 cagggtctcc aggttggaac acaagttact cacaattgtg tgtactaacc ttcttccttc
      901 ctattgaaat aagagggggt ctttcagtat tactgctgca tattctgcct tttattaaag
      961 aatctgtaag tacgctgagc atttacgcgt ttaggtggct ctgtatggtg ggtgagtcag
     1021 ggcgaggact tgtgcaaatc tttgccagga gctgtttgtc tagcctccag cagagggcga
     1081 ggaggacagc ttccacatgt tcccagtagg gggagccctt ccatgccaag gagggaacac
     1141 cagtactggt gaaggagggc gtgttgtcac aactggactt tgacagaagt agtccggggt
     1201 agaactgact gatatactcc aggtttgatc cgaatcactg gaggaatcag tctaagctgt
     1261 gtgaacctgc agggtcctgg gcatggaggc actggggttt tatcaaaggt taccttggaa
     1321 gagttcccaa cacatagggt gctcctctgg tcagaagttg tgcagaagca tctgcttgct
     1381 ttctaaccat agtatgcaat gctttaaggg ctcgctcaca gccggtggcc acactcgagg
     1441 cctggacacc aaatgtccga ggtcctcaaa tttaagctgt tgaggctttt tgagccccgt
     1501 gtggcaaagg ctctggtgtt ttctatttct atgcaaattt cttgaagcag aaatgttact
     1561 gtctctcctc tgtccttgga ggaggaggcc tttcctccca acttcaggtg cagcccctcg
     1621 tgattagcgt cttaacattt gtgacttggg tttgctgatc tcctttgtta cattggtgta
     1681 cctcgtagtg gtttttagtt tggctgtaaa tcattaaccc tgggttggtt agcatatgct
     1741 tctaaaaaaa aaaaaatggt cccagatttt gaaacttgta ataaaatgga aactcgatgg
     1801 tttttatgcc tttctaactc ttgtatctga atgttgatca ctttttgtat taaagtggct
     1861 gacacatggc tactgtcacc gtg
//
