LOCUS       XM_039086938             735 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ribosomal protein L19 (Rpl19),
            transcript variant X1, mRNA.
ACCESSION   XM_039086938
VERSION     XM_039086938.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039086938.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..735
                     /gene="Rpl19"
                     /note="ribosomal protein L19; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     mRNAs, 88 ESTs, 386 long SRA reads, 32 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 165 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:81767"
                     /db_xref="RGD:621183"
     CDS             66..650
                     /gene="Rpl19"
                     /codon_start=1
                     /product="60S ribosomal protein L19 isoform X1"
                     /protein_id="XP_038942866.1"
                     /db_xref="GeneID:81767"
                     /db_xref="RGD:621183"
                     /translation="MLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIK
                     DGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRR
                     LLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEAR
                     RSKTKEARKRREERLQAKKEEIIKTLSKEEETKK"
ORIGIN      
        1 gttttaaagc ttaaaaccga ttctcgatct tgatcatcta tgatcacggt cttttaggaa
       61 gaaatatgct taggctacag aagaggcttg cctctagcgt cctccgctgt ggtaaaaaga
      121 aggtgtggtt ggaccccaat gaaaccaacg aaatcgccaa tgccaactct cgtcaacaga
      181 tcaggaagct gatcaaagat ggcctgatca tccggaagcc tgtgactgtc cattcccggg
      241 ctcgatgccg gaagaacacc ttggcccgac ggaagggcag gcatatgggc atagggaaga
      301 ggaagggtac tgccaacgct cggatgcccg agaaggtgac ctggatgcga aggatgagga
      361 tcctgcgccg gcttctcagg agataccggg aatctaagaa gattgaccgt catatgtatc
      421 acagcctgta cctgaaggtc aaagggaatg tgttcaaaaa caagcggatt ctcatggagc
      481 acatccacaa actgaaggca gacaaggccc gcaagaagct actggctgac caggctgagg
      541 ctcgcaggtc taagaccaag gaagcacgaa agcgccggga ggagcgcctc caagccaaga
      601 aggaggagat catcaagact ctgtccaagg aggaagagac caagaaatga agcgtccctc
      661 gtgtctgtac atagtggcca ggctatggcc tcacatggat cagtcattaa aataaaacaa
      721 gccttcgtcc ttgtc
//
