LOCUS       NM_031103                703 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ribosomal protein L19 (Rpl19), mRNA.
ACCESSION   NM_031103
VERSION     NM_031103.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   Behrmann,E., Loerke,J., Budkevich,T.V., Yamamoto,K., Schmidt,A.,
            Penczek,P.A., Vos,M.R., Burger,J., Mielke,T., Scheerer,P. and
            Spahn,C.M.
  TITLE     Structural snapshots of actively translating human ribosomes
  JOURNAL   Cell 161 (4), 845-857 (2015)
   PUBMED   25957688
REFERENCE   2  (bases 1 to 703)
  AUTHORS   Sugihara,Y., Sadohara,E., Yonezawa,K., Kugo,M., Oshima,K.,
            Matsuda,T. and Nadano,D.
  TITLE     Identification and expression of an autosomal paralogue of
            ribosomal protein S4, X-linked, in mice: potential involvement of
            testis-specific ribosomal proteins in translation and
            spermatogenesis
  JOURNAL   Gene 521 (1), 91-99 (2013)
   PUBMED   23500592
REFERENCE   3  (bases 1 to 703)
  AUTHORS   Anger,A.M., Armache,J.P., Berninghausen,O., Habeck,M., Subklewe,M.,
            Wilson,D.N. and Beckmann,R.
  TITLE     Structures of the human and Drosophila 80S ribosome
  JOURNAL   Nature 497 (7447), 80-85 (2013)
   PUBMED   23636399
REFERENCE   4  (bases 1 to 703)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   5  (bases 1 to 703)
  AUTHORS   Kuo,J.C., Han,X., Hsiao,C.T., Yates,J.R. 3rd and Waterman,C.M.
  TITLE     Analysis of the myosin-II-responsive focal adhesion proteome
            reveals a role for beta-Pix in negative regulation of focal
            adhesion maturation
  JOURNAL   Nat Cell Biol 13 (4), 383-393 (2011)
   PUBMED   21423176
REFERENCE   6  (bases 1 to 703)
  AUTHORS   Davies,B., Feo,S., Heard,E. and Fried,M.
  TITLE     A strategy to detect and isolate an intron-containing gene in the
            presence of multiple processed pseudogenes
  JOURNAL   Proc Natl Acad Sci U S A 86 (17), 6691-6695 (1989)
   PUBMED   2771953
REFERENCE   7  (bases 1 to 703)
  AUTHORS   Chan,Y.L., Lin,A., McNally,J., Peleg,D., Meyuhas,O. and Wool,I.G.
  TITLE     The primary structure of rat ribosomal protein L19. A determination
            from the sequence of nucleotides in a cDNA and from the sequence of
            amino acids in the protein
  JOURNAL   J Biol Chem 262 (3), 1111-1115 (1987)
   PUBMED   3542997
REFERENCE   8  (bases 1 to 703)
  AUTHORS   Buisson,M. and Reboud,A.M.
  TITLE     Carbodiimide-induced protein--RNA crosslinking in mammalian
            ribosomal subunits
  JOURNAL   FEBS Lett 148 (2), 247-250 (1982)
   PUBMED   6759166
REFERENCE   9  (bases 1 to 703)
  AUTHORS   Faliks,D. and Meyuhas,O.
  TITLE     Coordinate regulation of ribosomal protein mRNA level in
            regenerating rat liver. Study with the corresponding mouse cloned
            cDNAs
  JOURNAL   Nucleic Acids Res 10 (3), 789-801 (1982)
   PUBMED   6121318
REFERENCE   10 (bases 1 to 703)
  AUTHORS   Ulbrich,N., Lin,A. and Wool,I.G.
  TITLE     Identification by affinity chromatography of the eukaryotic
            ribosomal proteins that bind to 5.8 S ribosomal ribonucleic acid
  JOURNAL   J Biol Chem 254 (17), 8641-8645 (1979)
   PUBMED   468846
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from X82202.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CF110514.1, FQ222282.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="F344"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q31"
     gene            1..703
                     /gene="Rpl19"
                     /note="ribosomal protein L19"
                     /db_xref="GeneID:81767"
                     /db_xref="RGD:621183"
     exon            1..33
                     /gene="Rpl19"
                     /inference="alignment:Splign:2.1.0"
     CDS             29..619
                     /gene="Rpl19"
                     /EC_number="6.3.5.5"
                     /note="60S ribosomal protein L19; 60S ribosomal protein
                     L19-like"
                     /codon_start=1
                     /product="large ribosomal subunit protein eL19"
                     /protein_id="NP_112365.1"
                     /db_xref="GeneID:81767"
                     /db_xref="RGD:621183"
                     /translation="MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKL
                     IKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL
                     RRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAE
                     ARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK"
     exon            34..140
                     /gene="Rpl19"
                     /inference="alignment:Splign:2.1.0"
     exon            141..263
                     /gene="Rpl19"
                     /inference="alignment:Splign:2.1.0"
     exon            264..384
                     /gene="Rpl19"
                     /inference="alignment:Splign:2.1.0"
     exon            385..495
                     /gene="Rpl19"
                     /inference="alignment:Splign:2.1.0"
     exon            496..703
                     /gene="Rpl19"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctttcctttc gctgctgcgt ctgcagccat gagtatgctt aggctacaga agaggcttgc
       61 ctctagcgtc ctccgctgtg gtaaaaagaa ggtgtggttg gaccccaatg aaaccaacga
      121 aatcgccaat gccaactctc gtcaacagat caggaagctg atcaaagatg gcctgatcat
      181 ccggaagcct gtgactgtcc attcccgggc tcgatgccgg aagaacacct tggcccgacg
      241 gaagggcagg catatgggca tagggaagag gaagggtact gccaacgctc ggatgcccga
      301 gaaggtgacc tggatgcgaa ggatgaggat cctgcgccgg cttctcagga gataccggga
      361 atctaagaag attgaccgtc atatgtatca cagcctgtac ctgaaggtca aagggaatgt
      421 gttcaaaaac aagcggattc tcatggagca catccacaaa ctgaaggcag acaaggcccg
      481 caagaagcta ctggctgacc aggctgaggc tcgcaggtct aagaccaagg aagcacgaaa
      541 gcgccgggag gagcgcctcc aagccaagaa ggaggagatc atcaagactc tgtccaagga
      601 ggaagagacc aagaaatgaa gcgtccctcg tgtctgtaca tagtggccag gctatggcct
      661 cacatggatc agtcattaaa ataaaacaag ccttcgtcct tgt
//
