LOCUS       NM_139114               1958 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ribosomal protein L15 (Rpl15), mRNA.
ACCESSION   NM_139114
VERSION     NM_139114.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1958)
  AUTHORS   Henras,A.K., Plisson-Chastang,C., O'Donohue,M.F., Chakraborty,A.
            and Gleizes,P.E.
  TITLE     An overview of pre-ribosomal RNA processing in eukaryotes
  JOURNAL   Wiley Interdiscip Rev RNA 6 (2), 225-242 (2015)
   PUBMED   25346433
  REMARK    Review article
REFERENCE   2  (bases 1 to 1958)
  AUTHORS   Guo,Z., Neilson,L.J., Zhong,H., Murray,P.S., Zanivan,S. and
            Zaidel-Bar,R.
  TITLE     E-cadherin interactome complexity and robustness resolved by
            quantitative proteomics
  JOURNAL   Sci Signal 7 (354), rs7 (2014)
   PUBMED   25468996
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1958)
  AUTHORS   Anger,A.M., Armache,J.P., Berninghausen,O., Habeck,M., Subklewe,M.,
            Wilson,D.N. and Beckmann,R.
  TITLE     Structures of the human and Drosophila 80S ribosome
  JOURNAL   Nature 497 (7447), 80-85 (2013)
   PUBMED   23636399
REFERENCE   4  (bases 1 to 1958)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   5  (bases 1 to 1958)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   6  (bases 1 to 1958)
  AUTHORS   Lee,N.H., Weinstock,K.G., Kirkness,E.F., Earle-Hughes,J.A.,
            Fuldner,R.A., Marmaros,S., Glodek,A., Gocayne,J.D., Adams,M.D.,
            Kerlavage,A.R. et al.
  TITLE     Comparative expressed-sequence-tag analysis of differential gene
            expression profiles in PC-12 cells before and after nerve growth
            factor treatment
  JOURNAL   Proc Natl Acad Sci U S A 92 (18), 8303-8307 (1995)
   PUBMED   7667285
REFERENCE   7  (bases 1 to 1958)
  AUTHORS   Chang,Y.L., Olvera,J. and Wool,I.G.
  TITLE     The primary structure of rat ribosomal protein L15
  JOURNAL   Biochem Biophys Res Commun 201 (1), 108-114 (1994)
   PUBMED   8198562
REFERENCE   8  (bases 1 to 1958)
  AUTHORS   Haviryaji,K.S., Srinivas,R., Suryanarayana,T. and Vemuri,M.C.
  TITLE     Effect of ethanol on hepatic ribosomal proteins and mRNA
  JOURNAL   Mol Cell Biochem 115 (2), 143-147 (1992)
   PUBMED   1448059
REFERENCE   9  (bases 1 to 1958)
  AUTHORS   Horne,Z. and Hesketh,J.
  TITLE     Immunological localization of ribosomes in striated rat muscle.
            Evidence for myofibrillar association and ontological changes in
            the subsarcolemmal:myofibrillar distribution
  JOURNAL   Biochem J 268 (1), 231-236 (1990)
   PUBMED   2188648
REFERENCE   10 (bases 1 to 1958)
  AUTHORS   Tsurugi,K., Collatz,E., Todokoro,K. and Wool,I.G.
  TITLE     Isolation of eukaryotic ribosomal proteins. Purification and
            characterization of 60 S ribosomal subunit proteins L3, L6, L7',
            L8, L10, L15, L17, L18, L19, L23', L25, L27', L28, L29, L31, L32,
            L34, L35, L36, L36', and L37'
  JOURNAL   J Biol Chem 252 (11), 3961-3969 (1977)
   PUBMED   863909
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AA687059.1 and BC078724.1.
            
            On Feb 21, 2007 this sequence version replaced NM_139114.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC078724.1, FQ221627.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-61                AA687059.1         7-67
            62-1958             BC078724.1         1-1897
FEATURES             Location/Qualifiers
     source          1..1958
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p16"
     gene            1..1958
                     /gene="Rpl15"
                     /gene_synonym="Rpl10"
                     /note="ribosomal protein L15"
                     /db_xref="GeneID:245981"
                     /db_xref="RGD:621181"
     exon            1..69
                     /gene="Rpl15"
                     /gene_synonym="Rpl10"
                     /inference="alignment:Splign:2.1.0"
     exon            70..251
                     /gene="Rpl15"
                     /gene_synonym="Rpl10"
                     /inference="alignment:Splign:2.1.0"
     CDS             80..694
                     /gene="Rpl15"
                     /gene_synonym="Rpl10"
                     /note="60S ribosomal protein L15"
                     /codon_start=1
                     /product="large ribosomal subunit protein eL15"
                     /protein_id="NP_620814.1"
                     /db_xref="GeneID:245981"
                     /db_xref="RGD:621181"
                     /translation="MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTR
                     PDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVA
                     EERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHRE
                     MRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR"
     exon            252..388
                     /gene="Rpl15"
                     /gene_synonym="Rpl10"
                     /inference="alignment:Splign:2.1.0"
     exon            389..1933
                     /gene="Rpl15"
                     /gene_synonym="Rpl10"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgggggagg agccacaaaa gggattgtgg gagaaaggct tcttcctttc ctctagtggc
       61 agccatcagg tgagccaaga tgggtgcata caaatacatc caggagctgt ggaggaagaa
      121 gcagtccgac gtgatgcgct tccttctaag ggtccgctgc tggcagtacc gccagctctc
      181 tgcgctgcac agggctcccc gccccacccg gcctgataag gcgcgaaggc tgggatacaa
      241 ggctaagcaa ggttatgtca tttacaggat ccgtgtccgc cgcggtggtc gcaagcgccc
      301 agttcctaag ggtgcaacct acggcaagcc tgtccaccac ggtgttaacc agctgaagtt
      361 tgcccgaagc cttcagtctg ttgctgagga gagagctggg cgccattgtg gagctttgag
      421 agtcctgaat tcctactggg ttggtgaaga ttccacatat aaattttttg aggttatcct
      481 cattgatcca ttccataaag ctatcagaag aaatcccgac acccaatgga ttaccaaacc
      541 agtccacaag cacagggaga tgcgtgggct gacatctgct ggccgcaaga gccgtggcct
      601 tggaaagggc cacaagttcc accacaccat tggtgggtct cgccgtgcag cctggagaag
      661 gcgcaacact cttcagctcc accgttaccg ctaattgacg taatatttgt aaaattcata
      721 tccaataaac aacttaggac agtcctctct gctcacaggt gttatttgtc tgttagaact
      781 agcctgcggg tcgtgagtgc tctgtggggg atgggagcta aagtgcagta gtaggaaacg
      841 gcgagtggcg gcgcgtcttg tttctgatgt actctgtttg caatttttgc ttaggggatt
      901 aagtgtatag tgtttgtgcc aagtggtatc ctgtgtgtaa gacttaaagt cctgaaacta
      961 gcctagatgc atgagagaga acctacagct ttacagtggg gtctctgttc actgaagtgg
     1021 ctggctgctt ggaagctgga tgagtacaga cagggagttg gattttgctt agaaatatgt
     1081 aggaagagag ggcttcaaac ctgttttgtg actattcata gaagagagat caactatagc
     1141 tcacattttg agaattgaat ccgtgttcca ttttcagaac actgggtaaa tttgttggaa
     1201 gaggtttcac ttctgttgga tctagagcat aggtttgaca tgtgtggatt ttgaagctag
     1261 tgaagattga acagtggata gggaagggca gattatttcc attaggattt ataagctagt
     1321 aaccatgtgg ttgcaagttc ctgtcaacca agcaaacaca gtaagtggtg tcaggcttac
     1381 aaacattaag ctttagtagc agctggtgtg tgaagaggca ggtggatctc caattccagg
     1441 actgcctaca gtatagagaa aatgtctcta ttcccgtcca taatagagca aaaccaaaaa
     1501 ttgggggctt ccaatcaatt cgtcttgggt aaggaacgtc cattggtagt ttgatttcat
     1561 tgtttacagt ctgcccgtgg gtagatgctc aggttgctgt ctcctggcat tgcctggaca
     1621 ttctacactc ataaaggcca cacatgccac tatgttttat ttctatttgt gccatgcctt
     1681 gtagtttccc aaagtgattt gagtggaaaa agcagaaatc gtccctatta catctgggtt
     1741 tgctcttttg gacagcagct agcttggtat ccaagtctaa gtgatgcttt tattaaaccg
     1801 atttttcctt ggagattttt aaaggaagat ttgatttcca gaaaatactt gagacctaaa
     1861 attctcagca aaacaagtca ctgtgtgtag aggttgttca actagaataa taaatgtctg
     1921 ttaaacaagt ggaaaaaaaa aaaaaaaaaa aaaaaaaa
//
