LOCUS       NM_031100                762 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus ribosomal protein L10 (Rpl10), mRNA.
ACCESSION   NM_031100 XM_227695
VERSION     NM_031100.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 762)
  AUTHORS   Zanni,G., Kalscheuer,V.M., Friedrich,A., Barresi,S., Alfieri,P., Di
            Capua,M., Haas,S.A., Piccini,G., Karl,T., Klauck,S.M.,
            Bellacchio,E., Emma,F., Cappa,M., Bertini,E. and
            Breitenbach-Koller,L.
  TITLE     A Novel Mutation in RPL10 (Ribosomal Protein L10) Causes X-Linked
            Intellectual Disability, Cerebellar Hypoplasia, and
            Spondylo-Epiphyseal Dysplasia
  JOURNAL   Hum Mutat 36 (12), 1155-1158 (2015)
   PUBMED   26290468
REFERENCE   2  (bases 1 to 762)
  AUTHORS   Brooks,S.S., Wall,A.L., Golzio,C., Reid,D.W., Kondyles,A.,
            Willer,J.R., Botti,C., Nicchitta,C.V., Katsanis,N. and Davis,E.E.
  TITLE     A novel ribosomopathy caused by dysfunction of RPL10 disrupts
            neurodevelopment and causes X-linked microcephaly in humans
  JOURNAL   Genetics 198 (2), 723-733 (2014)
   PUBMED   25316788
REFERENCE   3  (bases 1 to 762)
  AUTHORS   Voorhees,R.M., Fernandez,I.S., Scheres,S.H. and Hegde,R.S.
  TITLE     Structure of the mammalian ribosome-Sec61 complex to 3.4 A
            resolution
  JOURNAL   Cell 157 (7), 1632-1643 (2014)
   PUBMED   24930395
REFERENCE   4  (bases 1 to 762)
  AUTHORS   Anger,A.M., Armache,J.P., Berninghausen,O., Habeck,M., Subklewe,M.,
            Wilson,D.N. and Beckmann,R.
  TITLE     Structures of the human and Drosophila 80S ribosome
  JOURNAL   Nature 497 (7447), 80-85 (2013)
   PUBMED   23636399
REFERENCE   5  (bases 1 to 762)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   6  (bases 1 to 762)
  AUTHORS   Mills,A.A., Mills,M.J., Gardiner,D.M., Bryant,S.V. and
            Stanbridge,E.J.
  TITLE     Analysis of the pattern of QM expression during mouse development
  JOURNAL   Differentiation 64 (3), 161-171 (1999)
   PUBMED   10234813
REFERENCE   7  (bases 1 to 762)
  AUTHORS   Nguyen,Y.H., Mills,A.A. and Stanbridge,E.J.
  TITLE     Assembly of the QM protein onto the 60S ribosomal subunit occurs in
            the cytoplasm
  JOURNAL   J Cell Biochem 68 (2), 281-285 (1998)
   PUBMED   9443083
REFERENCE   8  (bases 1 to 762)
  AUTHORS   Chan,Y.L., Diaz,J.J., Denoroy,L., Madjar,J.J. and Wool,I.G.
  TITLE     The primary structure of rat ribosomal protein L10: relationship to
            a Jun-binding protein and to a putative Wilms' tumor suppressor
  JOURNAL   Biochem Biophys Res Commun 225 (3), 952-956 (1996)
   PUBMED   8780716
REFERENCE   9  (bases 1 to 762)
  AUTHORS   Reboud,A.M., Dubost,S. and Reboud,J.P.
  TITLE     Photoincorporation of tetracycline into rat-liver ribosomes and
            subunits
  JOURNAL   Eur J Biochem 124 (2), 389-396 (1982)
   PUBMED   7094919
REFERENCE   10 (bases 1 to 762)
  AUTHORS   Faliks,D. and Meyuhas,O.
  TITLE     Coordinate regulation of ribosomal protein mRNA level in
            regenerating rat liver. Study with the corresponding mouse cloned
            cDNAs
  JOURNAL   Nucleic Acids Res 10 (3), 789-801 (1982)
   PUBMED   6121318
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On Mar 5, 2022 this sequence version replaced NM_031100.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ222021.1, FQ221864.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-18                JAXUCZ010000021.1  157205850-157205867
            19-65               JAXUCZ010000021.1  157205980-157206026
            66-124              JAXUCZ010000021.1  157206664-157206722
            125-232             JAXUCZ010000021.1  157206802-157206909
            233-371             JAXUCZ010000021.1  157207078-157207216
            372-534             JAXUCZ010000021.1  157207586-157207748
            535-762             JAXUCZ010000021.1  157207830-157208057
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq37"
     gene            1..762
                     /gene="Rpl10"
                     /note="ribosomal protein L10"
                     /db_xref="GeneID:81764"
                     /db_xref="RGD:621178"
     exon            1..18
                     /gene="Rpl10"
                     /inference="alignment:Splign:2.1.0"
     exon            19..65
                     /gene="Rpl10"
                     /inference="alignment:Splign:2.1.0"
     CDS             43..687
                     /gene="Rpl10"
                     /EC_number="3.6.5.3"
                     /note="60S ribosomal protein L10"
                     /codon_start=1
                     /product="large ribosomal subunit protein uL16"
                     /protein_id="NP_112362.1"
                     /db_xref="GeneID:81764"
                     /db_xref="RGD:621178"
                     /translation="MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVD
                     EFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKM
                     LSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFP
                     GRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPLDKWRALHS"
     exon            66..124
                     /gene="Rpl10"
                     /inference="alignment:Splign:2.1.0"
     exon            125..232
                     /gene="Rpl10"
                     /inference="alignment:Splign:2.1.0"
     exon            233..371
                     /gene="Rpl10"
                     /inference="alignment:Splign:2.1.0"
     exon            372..534
                     /gene="Rpl10"
                     /inference="alignment:Splign:2.1.0"
     exon            535..762
                     /gene="Rpl10"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctcttttcct ctggcgcgcc atcgacgatc ctagttgtca tcatgggccg ccgccccgcc
       61 cggtgttatc gctattgtaa gaacaagcca tacccaaagt ctcgtttctg tcgtggtgtc
      121 cctgatgcta agatccgcat ctttgacttg ggacggaaga aagcaaaagt ggatgaattc
      181 ccactttgtg gccacatggt gtcagatgaa tatgaacaac tctcttctga agcactggag
      241 gctgcccgta tttgtgccaa caaatacatg gtaaagagtt gtggcaagga tggctttcat
      301 atccgggtga ggctccaccc tttccatgtc atccgtatca acaagatgtt gtcctgtgct
      361 ggggctgaca ggctccagac aggtatgcgt ggtgcctttg ggaagcccca gggcacagta
      421 gccagggttc acattggcca agtcatcatg tctatccgaa ccaagctgca gaataaggaa
      481 catgtgattg aggctctgcg cagggccaag ttcaagttcc ctggccgcca gaagatccac
      541 atctcaaaga aatggggttt taccaagttc aatgcagatg aatttgaaga catggttgct
      601 gagaagcggc tcattcctga tggctgtggt gtcaaatata tccccaatcg tggtcctctt
      661 gacaagtgga gagccctgca ttcctgaagg cttccacagt gctctcctat accctatcaa
      721 atcatgttca ataataaatc tcacatcaaa tctgcttatg ta
//
