LOCUS       NM_001004243            2220 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus RNA polymerase II associated protein 3 (Rpap3),
            mRNA.
ACCESSION   NM_001004243 XM_217045
VERSION     NM_001004243.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2220)
  AUTHORS   Mir,R.A., Bele,A., Mirza,S., Srivastava,S., Olou,A.A., Ammons,S.A.,
            Kim,J.H., Gurumurthy,C.B., Qiu,F., Band,H. and Band,V.
  TITLE     A Novel Interaction of Ecdysoneless (ECD) Protein with R2TP Complex
            Component RUVBL1 Is Required for the Functional Role of ECD in Cell
            Cycle Progression
  JOURNAL   Mol Cell Biol 36 (6), 886-899 (2015)
   PUBMED   26711270
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079414.1.
            
            On Sep 10, 2004 this sequence version replaced XM_217045.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079414.1, SRR8487231.169441.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2220
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q36"
     gene            1..2220
                     /gene="Rpap3"
                     /note="RNA polymerase II associated protein 3"
                     /db_xref="GeneID:300189"
                     /db_xref="RGD:1303036"
     exon            1..172
                     /gene="Rpap3"
                     /inference="alignment:Splign:2.1.0"
     CDS             20..1999
                     /gene="Rpap3"
                     /codon_start=1
                     /product="RNA polymerase II-associated protein 3"
                     /protein_id="NP_001004243.1"
                     /db_xref="GeneID:300189"
                     /db_xref="RGD:1303036"
                     /translation="MTSTSKAVELQLQVKHNAEELQDFMRDLEHWEKTMRQKDLELRR
                     QSGVPEENLPPIRNGSFRKKKKRKTKDSSKKTKEENTKNRIKSFDYDAWAKLDVDSIL
                     DELDKEDSTHDSVSQESESDEDGVRVDSQKALVLKEKGNKYFKQGKYDEAIECYTKGM
                     DADPYNPVLPTNRASAYFRLKKFAVAESDCNLAIALSRSYTKAYARRGAARFALQKLE
                     DARKDYVKVLELEPDNFEATNELRKIDQALTSKENSHPKDIAAVIKPAEGERKANEDQ
                     RGRQKAIAEKDLGNGFFKEGKYEQAIECYTRGIAADSTNALLPANRAMAYLKVQKYEE
                     AERDCTQAILLDGSYSKAFARRGTARTFLGKINEAKQDFETVLLLEPGNKQAVTELSR
                     IKKELIEKGRWDDVFLDSTQRHNVVKPVDSPHRGSPKALKKVFIEETGNLIESVDAPE
                     SSATVPESDRAAVAVDTGRKKDFSQGDSVSSGETPRAKVLKIEAVGDSSAPQAQVDVK
                     QGVRQSVSEKTSVRVAQTPGQLAAVVLPPVPANSFQLESDFRQLRSSPEMLYQYVKKI
                     EPSLYPKLFQKNLDPDVFNQIIKILHDFYVEREKPALIFEVLERLSQLRRFDMAVMFM
                     SGTERELTKVLFNHLEKSELKEDSVEELKKRYGGG"
     exon            173..313
                     /gene="Rpap3"
                     /inference="alignment:Splign:2.1.0"
     exon            314..436
                     /gene="Rpap3"
                     /inference="alignment:Splign:2.1.0"
     exon            437..564
                     /gene="Rpap3"
                     /inference="alignment:Splign:2.1.0"
     exon            565..686
                     /gene="Rpap3"
                     /inference="alignment:Splign:2.1.0"
     exon            687..757
                     /gene="Rpap3"
                     /inference="alignment:Splign:2.1.0"
     exon            758..883
                     /gene="Rpap3"
                     /inference="alignment:Splign:2.1.0"
     exon            884..1011
                     /gene="Rpap3"
                     /inference="alignment:Splign:2.1.0"
     exon            1012..1133
                     /gene="Rpap3"
                     /inference="alignment:Splign:2.1.0"
     exon            1134..1204
                     /gene="Rpap3"
                     /inference="alignment:Splign:2.1.0"
     exon            1205..1303
                     /gene="Rpap3"
                     /inference="alignment:Splign:2.1.0"
     exon            1304..1524
                     /gene="Rpap3"
                     /inference="alignment:Splign:2.1.0"
     exon            1525..1711
                     /gene="Rpap3"
                     /inference="alignment:Splign:2.1.0"
     exon            1712..1809
                     /gene="Rpap3"
                     /inference="alignment:Splign:2.1.0"
     exon            1810..1910
                     /gene="Rpap3"
                     /inference="alignment:Splign:2.1.0"
     exon            1911..2195
                     /gene="Rpap3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cccgagtttg cagggcgcga tgacctcgac aagtaaggcg gttgaactgc agctccaggt
       61 gaagcacaat gcggaggaac tgcaggattt catgagggac ttggagcact gggaaaagac
      121 tatgaggcag aaggatctgg agctcagaag gcagagtggc gttcccgagg agaatttacc
      181 tcctattcga aatgggagtt ttaggaaaaa gaagaaacgt aaaactaaag attcttccaa
      241 aaaaaccaaa gaagaaaaca caaaaaacag aataaaatct ttcgattatg atgcctgggc
      301 aaaacttgat gtggacagta ttcttgatga gcttgataaa gaagacagca cccacgattc
      361 tgtgtcccag gagtcagagt cggacgaaga cggtgttcgt gtggattccc agaaggctct
      421 tgttctaaaa gaaaagggca acaagtactt caagcaaggg aaatatgacg aagccattga
      481 atgctacacg aaaggcatgg atgccgatcc ctacaaccct gtgttgccaa caaacagagc
      541 atctgcctac tttagactga aaaaatttgc tgttgctgag tctgactgta atttggcaat
      601 tgccttaagc aggagttata ccaaggctta tgccagacga ggtgctgctc gatttgctct
      661 gcagaagtta gaggacgcta gaaaagatta tgtaaaagtg ttagaactgg aaccagataa
      721 cttcgaagca acgaatgaac tcaggaaaat tgatcaggct ttaacatcga aggaaaattc
      781 acatcccaaa gacattgctg ccgtgattaa accagctgaa ggagagagaa aagcaaatga
      841 agatcagcgg ggcaggcaga aggccattgc agagaaagac ctgggcaatg gatttttcaa
      901 agaggggaag tacgagcaag caatcgaatg ctacacccgt gggatagcag cggacagcac
      961 caatgccctg ctccccgcta acagagccat ggcctacctc aaggttcaga aatatgaaga
     1021 agctgaaaga gactgcacac aggctatctt actagatggt tcatattcaa aagcttttgc
     1081 cagaagagga actgcaagga catttttggg aaagatcaat gaggccaagc aagatttcga
     1141 aactgtttta cttctggaac ctggaaataa acaggcagtg accgagcttt ccagaattaa
     1201 aaaggaatta attgagaaag gacgctggga tgatgtcttt cttgactcca cacagaggca
     1261 caatgtggta aagcctgtag acagtcctca tcgggggtca cctaaagcac tcaagaaggt
     1321 ttttattgaa gaaactggca atttgataga gtctgtcgat gcaccagaga gctctgccac
     1381 cgtccccgag agtgaccgag cagcagtggc tgtggacact ggacgcaaga aggatttcag
     1441 ccagggcgac tctgtgtcct caggggagac accaagagct aaagtgttga aaatagaagc
     1501 agtcggcgac tcgtcagccc cacaggcgca ggtggacgtg aagcagggcg tgcgtcagtc
     1561 agtgagtgag aaaacctctg tgagggtagc gcagacgccg ggtcagttgg ccgctgtagt
     1621 tctgcctcca gttcctgcca actccttcca gctggagtct gatttcagac agttgagaag
     1681 ttcccccgag atgctgtatc agtatgtgaa gaaaattgaa ccatctttgt atccgaagtt
     1741 gtttcagaaa aacctagatc cagatgtatt caatcaaatc attaaaattt tacacgactt
     1801 ttacgttgag agggaaaagc cagctctcat ctttgaagtc ttagaaaggc tttctcagct
     1861 aagaaggttc gacatggcgg tgatgtttat gtcaggaact gagagagagc tcacaaaagt
     1921 attattcaat cacttagaaa aatcagaatt gaaggaggat tctgttgaag aactcaagaa
     1981 aagatacggc ggtggctgac ctccatgatt ggacattgtt acctcttctg tgtatgttac
     2041 ttttcttact gaaatcaagt gtttggccct ttagacagtg aaaccttacc tgagaggact
     2101 ttcctctctg gacggcagtt gactcactgt aaatgttctg tggcctaact cgtgagaaat
     2161 gcttcaaaaa taaactaagt ttccatgaga taaataaaaa aaaaaaaaaa aaaaaaaaaa
//
