LOCUS       NM_001271177            3163 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus arginyl aminopeptidase like 1 (Rnpepl1), mRNA.
ACCESSION   NM_001271177 XM_003750739 XM_003754551
VERSION     NM_001271177.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3163)
  AUTHORS   Horikawa Y, Oda N, Cox NJ, Li X, Orho-Melander M, Hara M, Hinokio
            Y, Lindner TH, Mashima H, Schwarz PE, del Bosque-Plata L, Horikawa
            Y, Oda Y, Yoshiuchi I, Colilla S, Polonsky KS, Wei S, Concannon P,
            Iwasaki N, Schulze J, Baier LJ, Bogardus C, Groop L, Boerwinkle E,
            Hanis CL and Bell GI.
  TITLE     Genetic variation in the gene encoding calpain-10 is associated
            with type 2 diabetes mellitus
  JOURNAL   Nat Genet 26 (2), 163-175 (2000)
   PUBMED   11017071
  REMARK    Erratum:[Nat Genet 2000 Dec;26(4):502]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CH473997.2.
            
            On or before Sep 7, 2012 this sequence version replaced
            XM_003750739.1, XM_003754551.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132262 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-87                CH473997.2         4938049-4938135
            88-513              CH473997.2         4938137-4938562
            514-654             CH473997.2         4941826-4941966
            655-806             CH473997.2         4942583-4942734
            807-923             CH473997.2         4943121-4943237
            924-1159            CH473997.2         4943463-4943698
            1160-1273           CH473997.2         4943900-4944013
            1274-1386           CH473997.2         4944392-4944504
            1387-1495           CH473997.2         4944778-4944886
            1496-1726           CH473997.2         4945489-4945719
            1727-1869           CH473997.2         4945799-4945941
            1870-3163           CH473997.2         4946460-4947753
FEATURES             Location/Qualifiers
     source          1..3163
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q36"
     gene            1..3163
                     /gene="Rnpepl1"
                     /note="arginyl aminopeptidase like 1"
                     /db_xref="GeneID:684035"
                     /db_xref="RGD:1595210"
     CDS             1..2175
                     /gene="Rnpepl1"
                     /EC_number="3.4.11.18"
                     /note="arginyl aminopeptidase (aminopeptidase B)-like 1"
                     /codon_start=1
                     /product="aminopeptidase RNPEPL1"
                     /protein_id="NP_001258106.1"
                     /db_xref="GeneID:684035"
                     /db_xref="RGD:1595210"
                     /translation="MAAQCCCRKAPGAEAAPARPPPEPPPALEVASASSAQLFRLRHL
                     QLGLELRPEARELAGCLVLELCALRPAPRALVLDAHPALRLHSVSFRRASATSESPCT
                     FAFPAPGSGPPLPAFADAPGAESAGCPLAFRLDPFTDYGSSLTITLPPEVQAHQPFQV
                     IVRYTSTDAPAIWWLDPELTYGNAKPFVFTQGHSVCNRSFFPCFDTPAVKCTYSAVVK
                     APSGVQVLMSATQSAYVEEEGLYHFHMEHPVPAYLVALVAGDLKPADIGPRSRVWAEP
                     CLLPTATSKLSGAVEQWLSAAERLYGPYMWGRYDIVFLPPSFPIVAMENPCLTFIISS
                     ILESDEFLVIDVIHEVAHSWFGNAVTNATWEEMWLSEGLATYAQRRITTETYGAAFTC
                     LETAFRLDALHRQMRLLGEDSPVSKLQVKLEPGVNPSHLMNLFTYEKGYCFVYYLSQL
                     CGDPQRFDDFLRAYVEKYKFTSVVAQDLLDSFLSFFPELKEQSVDCRAGLEFERWLNA
                     TGPPLAEPDLSQGSSLTRPVEALFQLWTAEPLEQAAASASAIDISKWRTFQTALFLDR
                     LLDGSPLPQEVVMSLSKCYSSLLDSMNTEIRIRWLQIVVRNDYYPDLHRVRRFLENQM
                     SRMYTIPLYEDLCTGALKSFALEVFYQTQGRLHPNLRRTIQQILSQGLGPSAEPSAEP
                     SAEPSAELGGAEADTNPDSPALLLGDEAPSSTISLRDVNVSA"
     exon            1..513
                     /gene="Rnpepl1"
                     /inference="alignment:Splign:2.1.0"
     exon            514..654
                     /gene="Rnpepl1"
                     /inference="alignment:Splign:2.1.0"
     exon            655..806
                     /gene="Rnpepl1"
                     /inference="alignment:Splign:2.1.0"
     exon            807..923
                     /gene="Rnpepl1"
                     /inference="alignment:Splign:2.1.0"
     exon            924..1159
                     /gene="Rnpepl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1160..1273
                     /gene="Rnpepl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1274..1386
                     /gene="Rnpepl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1387..1495
                     /gene="Rnpepl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1496..1726
                     /gene="Rnpepl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1727..1869
                     /gene="Rnpepl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1870..3163
                     /gene="Rnpepl1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggcggcgc agtgctgctg ccgcaaggcg cccggcgcag aagccgcgcc cgcccgcccg
       61 ccgccggagc cgccgcccgc cctggaagtg gcctcggcct ccagcgcgca gctcttccgc
      121 ctccgccacc tgcagctggg cctggagcta cggcccgagg cgcgtgagct ggccggctgc
      181 ctggtgctgg aactgtgcgc gctgcggccc gcgccccgcg cgctcgtgct cgacgcgcac
      241 ccggccttgc gcctacactc ggtttcgttc cgccgcgcct ccgccacctc cgagtcgccc
      301 tgcaccttcg ccttccctgc cccggggtca gggcccccgc tgcccgcttt cgccgatgcg
      361 cctggagcgg agtctgccgg ctgcccgctg gccttcaggc tggacccgtt caccgactat
      421 ggctcctctc tgaccatcac actgcctccc gaggtgcagg cgcaccagcc cttccaggtc
      481 atcgtacgct acacctcgac cgacgccccc gccatctggt ggctggaccc agagctgacc
      541 tacggcaacg ccaaaccttt cgtcttcacc cagggccact ctgtgtgcaa ccgctccttc
      601 ttcccatgct tcgacacgcc ggcagtcaag tgcacctact cagctgtcgt caaggccccg
      661 tcaggggtac aggtgctgat gagtgccact cagagcgcgt acgtggaaga ggaaggcctc
      721 taccacttcc acatggagca cccagtaccc gcctacctcg tagcccttgt ggccggagac
      781 ctcaagccag cagacattgg gcccaggagc cgtgtgtggg ctgagccatg cctcctaccc
      841 acagccacca gcaagttatc aggtgctgtg gaacagtggc tgagtgcagc agagcgatta
      901 tacgggccat acatgtgggg cagatatgac atcgtgttcc tgccgccctc cttccccatc
      961 gtggccatgg agaacccctg cctcaccttc atcatctcct ccatccttga gagcgatgag
     1021 ttcctggtga ttgacgtcat ccacgaggta gcccacagct ggtttggcaa tgctgtcacc
     1081 aacgccactt gggaggagat gtggctgagt gagggcctgg ccacctatgc acagcgccgc
     1141 atcaccacgg agacctacgg ggctgccttc acctgcctag agacagcctt ccgcttggat
     1201 gccctgcata ggcagatgcg gcttcttggg gaagatagcc cggttagcaa gttgcaggtc
     1261 aagctagaac caggagtgaa tcccagtcac ctgatgaacc tgttcaccta tgagaagggc
     1321 tactgtttcg tctactacct gtcccagctc tgtggagatc cccagcgctt tgacgacttt
     1381 ctcagagcct atgtggagaa atacaaattc accagtgtgg tggcccagga cctgctggac
     1441 tccttcttga gcttcttccc tgaactgaag gagcagagcg tggactgccg ggcagggctg
     1501 gagttcgaac gctggctcaa tgccacaggc ccaccgctgg ctgagccaga cctgtctcag
     1561 gggtccagcc taacccggcc tgtggaagcc cttttccagc tgtggaccgc agagcccctg
     1621 gagcaggcag cagcttcagc cagtgccatt gacatctcca agtggaggac cttccagaca
     1681 gcactcttcc tggaccggct gcttgatgga tccccgttgc cccaggaggt ggtgatgagt
     1741 ctatccaaat gctactcatc cctgctggac tccatgaaca ctgagatccg catccgctgg
     1801 ctgcagattg tcgtccgcaa tgactactat cctgatcttc acagggtccg ccgctttctg
     1861 gagaaccaga tgtcgcgcat gtacaccatc ccattgtacg aggatctctg cactggcgcc
     1921 ctcaagtcct tcgcactaga ggtcttctac cagacacagg gccggctgca tcccaacttg
     1981 cgcagaacca tccagcagat cctatcccag gggctaggcc ccagtgccga gcccagtgca
     2041 gagcccagtg cggagcccag cgcagaactg ggcggtgctg aggcagacac gaacccagac
     2101 tcgccagccc tgctgctcgg ggacgaggcc cccagcagca ccatctctct cagggacgtc
     2161 aatgtgtctg cctaaccttg atggtgactg accctcgacc tcccagacac cacgattgtg
     2221 cctttagtgg tccgggccgc cttgactgcg ccttggctct ggccacgagc tctgcccggg
     2281 accataaacc cctcccattg gctccaggcc tggggtatgg gggaaaagga tcttgtgtcc
     2341 atcgatgccc gtggaccagg gctctccttg tccctgctct cttgcactgc aggccccagg
     2401 gatggcctat gcgcactatg cctcctgttt caacactgac agccatgcct caccctggaa
     2461 gccagcatct gctgacactg ccctggggac agtgacccca gcagtcccac agcaacaacc
     2521 acaatgtgcc ttacatgtgc cagagaccca ggatgcacgg tcctagaaat gtgctttcct
     2581 gcagagccct aggtctggtc cccaggctgg aaagtcttgc ttgagggcca gaagacagag
     2641 gggcaaggac acaggtattc tgtcagtgtg ggggtaggag acagaaggag aggctagact
     2701 tctcaaacag gcctctgtct ctgcactagg agtccaggcc ccagaggtac agggagggat
     2761 ggcctggcct tgtggctact ggggtaccct tggtgctctc tgtgcctgcc tgctgggaga
     2821 gataccagac tgtgagcttc agcctgggac cactgcaaca ggaaccatgg tgactgtccc
     2881 attaaatctc cactctgcag atctgagctc ccttcctgtt tgtcactacc ctgtcttttg
     2941 cacctactca ggtaccaggg gtagggctgg aagaaatgag acccggtcac cggtcaccga
     3001 attatggtca tagcctgacc caatcacctc aatagaggtg agaacctgac cctgaaggct
     3061 caggcgggga tggaggttta gggggaagaa aaggcagcac cttgttgttc tcagctcctc
     3121 agttagacct gcaggaccct aaaaggaatg tttgttaccc tca
//
