LOCUS       XM_008760345            1327 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus renalase, FAD-dependent amine oxidase
            (Rnls), transcript variant X3, mRNA.
ACCESSION   XM_008760345
VERSION     XM_008760345.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_008760345.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1327
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1327
                     /gene="Rnls"
                     /gene_synonym="RGD1309804"
                     /note="renalase, FAD-dependent amine oxidase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 62 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:361751"
                     /db_xref="RGD:1309804"
     CDS             228..1130
                     /gene="Rnls"
                     /gene_synonym="RGD1309804"
                     /codon_start=1
                     /product="renalase isoform X2"
                     /protein_id="XP_008758567.1"
                     /db_xref="GeneID:361751"
                     /db_xref="RGD:1309804"
                     /translation="MTTANSPHNPRCTADLGAQYITCTPHYAKKHQNFYEELLAHGIL
                     EPLTSPIKGMEVKEGESNFVAPHGVSSIIKYYLKESGAEVFLRQCVTQINLRDNKWEV
                     SEDTGSTQQFDLVILTMPAPQILGLQGDIVNLISERQRQQLASVSYSSRYALGLFYEA
                     GMKIDVPWAGQYITSNPCIRFISIDSKKRNTESSECGPLLVVHTTVPFGVTHLEHSEE
                     DVQELITQQLETILPGLPPPVATKCWKWRYSQVTNSAANSPGQMTLHLNPFLVCGGDG
                     FTHSNFDGCVASALSVVEALKSYI"
ORIGIN      
        1 tgtgggtcag ccagagcgtg acaggactct cctcggtgaa gtaggccggc cacccagtcg
       61 ctctgaggag aaaagcccag ccgcagcttt tcccttgccg ctgcagagct ctttgcttgt
      121 gcgcgcagtc acgtgactcg aggctgcagc agacagaagg ccgctcccgg aggtgccaga
      181 gggctggatc tcagcactgc ccagggaggc ttgttcctgg gggaagaatg actactgcca
      241 acagtcctca taatccccga tgcacggctg acttgggagc tcagtacatc acctgtactc
      301 ctcattatgc caaaaagcac caaaattttt atgaggagct tttagctcat gggattttgg
      361 agcctctgac gtctcccatt aaaggaatgg aagtgaagga aggagaaagc aactttgtgg
      421 cacctcacgg cgtttcttcc attatcaagt actacttgaa agaatcaggt gctgaagtct
      481 tcctcaggca gtgtgtgact cagatcaatc taagagataa caagtgggaa gtctctgagg
      541 acaccggctc cacccagcag tttgaccttg tcatccttac catgccagct cctcagattc
      601 tgggtcttca aggtgacatt gtgaacttaa ttagtgaacg ccagaggcag caactggcat
      661 ctgtgagcta ctcctctcgc tatgctctgg gcctctttta tgaagcaggc atgaagattg
      721 atgtcccttg ggctggccag tacatcacca gtaatccctg catacgcttc atctccattg
      781 acagtaagaa gcgcaacaca gagtcatcag aatgtggccc attgctggtg gtccatacca
      841 ccgtcccatt tggagtcaca cacttggagc acagtgagga ggatgtgcag gagttaatca
      901 cccagcaact ggaaaccatt ctgccgggct tgccgccgcc agttgctacc aaatgctgga
      961 agtggagata ttcacaggtt acaaactcag ctgccaacag tcccggccag atgactcttc
     1021 atctcaaccc tttcctggtg tgtggagggg atggattcac tcactccaac ttcgatggct
     1081 gcgttgcctc tgccctgagt gtcgtggaag ctttaaagag ttatatttag tgtctgtgtt
     1141 tttgttttct acagttactt tgcgattttt gttttcacaa tcatattatt aattgttcta
     1201 ttttcctttc tatggagaga aattgtttgg gaaaatgtct tcatgttctg tcatttttaa
     1261 tatgaaatat aaaaactatt ataattgata gctaccaccc ataaaagaat gataatttct
     1321 tagacta
//
