LOCUS       XM_006256226            1547 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ring finger protein 8 (Rnf8),
            transcript variant X4, mRNA.
ACCESSION   XM_006256226
VERSION     XM_006256226.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006256226.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006256226.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1547
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1547
                     /gene="Rnf8"
                     /note="ring finger protein 8; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 55 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:361815"
                     /db_xref="RGD:1308035"
     CDS             216..1469
                     /gene="Rnf8"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase RNF8 isoform X2"
                     /protein_id="XP_006256288.1"
                     /db_xref="GeneID:361815"
                     /db_xref="RGD:1308035"
                     /translation="MGEPDPLVSGQLAARRSWCLRRLGMDREWLQLEAGSEVTIGRGF
                     SVTYQLISKVCPLMISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRERLAPLQGYCIRK
                     GDHIQLGVPLESKEHAEYEYEVIEEDRESLAPCLAPKNDHTTEKHKGLRTKRKFSSDG
                     VESLPAEGPSDLRCPLAKGSSKPAEPEKLHGKGEAASQPLGCLCPTLASLEASERTAG
                     PHACSTLPKVLELYPKKQKACSPSASQSSLELFKMTMSRMLKLKTQMQEKQIAVLNVK
                     RQARKGSSKKVVRMEKELRDLQSQLYAEQAQQQARVEQLEKTFQEEEQHLQGLEKEQG
                     ECDLKQQLLQALQESANRTGARCSHHPAGDLEPHRYAPDLRRGSVCLHQAEGALVMTE
                     QPGDDLGIGALLQNSEGSGGQSIAL"
ORIGIN      
        1 tccccgccct ccgccgccgt cgccctcccg ctgcgcacgc gcaatgcctg ccttcctagc
       61 ccaggggcgg gcccgcgctc gccgcgccac cgatctccgg gcgattgctt ctgtctggtg
      121 tttaggtatg gtgcgcgaga ggcgcctcgg aagcgatcgg agcccaggct ggagtttggc
      181 tggttactga aagttgcccc ggtgccgagc gggctatggg cgagcccgac cccttggtct
      241 cggggcagct cgcggcccgc cggagctggt gcttgcggcg gctggggatg gaccgcgagt
      301 ggctacagct ggaggctggg agtgaggtga ccataggacg gggattcagt gtcacgtacc
      361 agctgatctc aaaggtgtgc cctctgatga tttctcgaaa ccactgcgtt ctgaagcaga
      421 atcctgaggg acaatggacg attatggaca ataagagtct gaatggtgtt tggctgaaca
      481 gagagcgtct ggcgccgtta cagggttact gcatccgtaa gggagaccac atccagctcg
      541 gagtgcctct ggaaagcaag gagcatgcgg agtacgaata cgaagttatc gaagaagacc
      601 gggagagtct ggctccctgc cttgccccca agaatgacca cacaacggaa aaacataaag
      661 gcttgagaac taagaggaag ttcagttcgg atggggtaga gagtcttcca gccgagggcc
      721 cctcagatct caggtgccca ctggctaaag gctccagtaa acccgctgag ccagagaagt
      781 tacacggcaa aggtgaagcg gcaagtcagc ccttgggatg tttgtgccct accttggcgt
      841 ctcttgaggc gagtgagagg accgcggggc ctcatgcttg ctctactctt cctaaggtcc
      901 tcgaactcta tcctaagaag cagaaggcct gcagcccatc agcatctcag agcagcttag
      961 aactgtttaa gatgaccatg tccaggatgc tcaagctgaa aacccagatg caagaaaagc
     1021 agattgctgt cctgaacgtc aagaggcagg cccggaaggg gagctcaaag aaagtcgtga
     1081 ggatggagaa ggagctgcga gacctacagt cccagctgta cgcagagcag gctcagcagc
     1141 aggcaagagt ggagcagctg gagaagacgt tccaggagga ggagcagcac ctccagggtt
     1201 tggagaaaga gcaaggagag tgtgatctga agcaacagct gctgcaggct ctgcaggagt
     1261 ctgcaaacag aacaggtgcc agatgctcac accatccggc tggagatttg gagcctcaca
     1321 gatacgcacc agatctcagg cgtggaagcg tatgtctcca tcaagcagaa ggcgccctgg
     1381 tgatgacaga gcagcctgga gacgatctcg ggataggggc tctacttcag aatagcgagg
     1441 gcagcggcgg gcagagcatc gcgctctaat ggaagaacta gatcgcagca agaaggactt
     1501 tgagaaaatc attcaagcca agaacaaaga attggagcgg accaagg
//
