LOCUS       NM_001395025            1569 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus ring finger protein 32 (Rnf32), transcript
            variant 1, mRNA.
ACCESSION   NM_001395025
VERSION     NM_001395025.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1569)
  AUTHORS   van Baren,M.J., van der Linde,H.C., Breedveld,G.J., Baarends,W.M.,
            Rizzu,P., de Graaff,E., Oostra,B.A. and Heutink,P.
  TITLE     A double RING-H2 domain in RNF32, a gene expressed during sperm
            formation
  JOURNAL   Biochem Biophys Res Commun 292 (1), 58-65 (2002)
   PUBMED   11890671
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: SRR26360190.1900856.1,
                                    SRR26360181.3109850.1 [ECO:0000331]
            RNAseq introns       :: partial sample support SAMEA5760383,
                                    SAMEA5760389 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-88                JAXUCZ010000004.1  6883889-6883976     c
            89-155              JAXUCZ010000004.1  6883360-6883426     c
            156-245             JAXUCZ010000004.1  6882026-6882115     c
            246-510             JAXUCZ010000004.1  6881209-6881473     c
            511-653             JAXUCZ010000004.1  6877481-6877623     c
            654-686             JAXUCZ010000004.1  6874885-6874917     c
            687-811             JAXUCZ010000004.1  6874268-6874392     c
            812-920             JAXUCZ010000004.1  6873767-6873875     c
            921-1088            JAXUCZ010000004.1  6826131-6826298     c
            1089-1569           JAXUCZ010000004.1  6824970-6825450     c
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q11"
     gene            1..1569
                     /gene="Rnf32"
                     /note="ring finger protein 32"
                     /db_xref="GeneID:311936"
                     /db_xref="RGD:1308287"
     exon            1..88
                     /gene="Rnf32"
                     /inference="alignment:Splign:2.1.0"
     exon            89..155
                     /gene="Rnf32"
                     /inference="alignment:Splign:2.1.0"
     exon            156..245
                     /gene="Rnf32"
                     /inference="alignment:Splign:2.1.0"
     CDS             231..1337
                     /gene="Rnf32"
                     /codon_start=1
                     /product="RING finger protein 32"
                     /protein_id="NP_001381954.1"
                     /db_xref="GeneID:311936"
                     /db_xref="RGD:1308287"
                     /translation="MLKNKDRSSKKSNLAVSAVALQDHILRDLQLGHLSVADPCKTKV
                     QKKENKSQSLRKGSAAMMDTGLRKTAEGPKGEDPEKEYVLDPTPPPLTLAQKLGLLAL
                     PPLPLSSDEWEKVKQRSLLQGDSMQPCPICKEEFELQPQVLLSCSHVFHRACLQAFEK
                     FTNRKTCPLCRKNQYQTRVIHDGARLFRVKCATRIQAYWRGYIVRKWYRNLRKMIPPT
                     DAKLRRKFFEEKFTEISHRILCSYNTNIDELFSEIDVCLAVNRSILQQLDERCGQEIT
                     EEDWEKIQAQAAHHEIYECSICLTPLFFHCDGRQAAAGTSSQHPRETVLLSCAHLFHN
                     ACLLALEEFSLGDNAPFNVCPLCRSCYQKKIVEY"
     exon            246..510
                     /gene="Rnf32"
                     /inference="alignment:Splign:2.1.0"
     exon            511..653
                     /gene="Rnf32"
                     /inference="alignment:Splign:2.1.0"
     exon            654..686
                     /gene="Rnf32"
                     /inference="alignment:Splign:2.1.0"
     exon            687..811
                     /gene="Rnf32"
                     /inference="alignment:Splign:2.1.0"
     exon            812..920
                     /gene="Rnf32"
                     /inference="alignment:Splign:2.1.0"
     exon            921..1088
                     /gene="Rnf32"
                     /inference="alignment:Splign:2.1.0"
     exon            1089..1569
                     /gene="Rnf32"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgagggtca ggcgaagccg gcgcgcgtgc gcactccgaa gcgcaccggc cgctagttgc
       61 cgtggcaacg aggagtggat ctgaaaagtt cgactacatc tggcatgttt cgttattttt
      121 taaatcatac aatttgctaa tgctatgtga ctttacagaa aaaaatggaa gttattgtaa
      181 tgggatgcta aagattgttg aagcctcacc acggtgtttc ctgatacagc atgttaaaaa
      241 ataaggatcg ttcatctaaa aaaagtaact tagcagtctc tgcagttgcc ttacaagacc
      301 acatattacg tgatcttcaa cttggacatc tctcagtagc agatccttgt aagacaaaag
      361 tgcaaaagaa agagaacaaa tcacaatctc tcagaaaagg ctcggcagcc atgatggaca
      421 ctggacttag aaagactgca gaggggccta aaggggaaga tccagagaag gaatatgttc
      481 tagaccccac accaccaccg ttaactttag cccagaaact gggtctcttg gcacttcccc
      541 cattaccact gtcatcagat gaatgggaga aagtgaagca gagatccctt ctacaagggg
      601 actccatgca gccatgccca atatgtaaag aagaatttga gctccaaccc caggtactgc
      661 tttcctgctc acacgtgttc catagggcat gccttcaggc ttttgaaaag ttcacaaata
      721 gaaaaacctg tcctctctgt agaaagaacc aatatcaaac gagagtgata cacgacgggg
      781 ctcgtctgtt cagagtaaag tgtgccacca gaatccaagc ctattggaga gggtacatcg
      841 ttagaaagtg gtatagaaac ctgagaaaaa tgatcccacc tacggatgcc aaattaagga
      901 gaaagttctt tgaggaaaag ttcacagaaa tcagccaccg aatcctgtgc tcatacaata
      961 ccaacataga tgaactcttc tcagagattg acgtctgctt ggcagtaaat cgtagcattc
     1021 ttcagcagct agatgaaagg tgtggccagg agatcactga ggaggactgg gagaaaatcc
     1081 aagcgcaggc tgctcaccat gagatctatg aatgttctat ctgcctgact ccactcttct
     1141 tccactgcga tggtcggcaa gcagccgcag ggaccagcag ccagcatccc cgagagacgg
     1201 tcctcctgtc ctgtgcacat ctgttccaca atgcctgcct cctggccttg gaggagtttt
     1261 ctttaggaga caatgctcct ttcaacgtct gtcctctctg tcgctcttgc taccaaaaga
     1321 aaattgttga atattgagtc catgtccagg aagttaaatc taggactaga acaagagagg
     1381 ggaaaaggct accttgcttt cggatgagct gaatgagttc tgggttgagg actacactac
     1441 tgactgttct ttgtgattat atagagaaaa tataagtacc tatttgactg tgatctttat
     1501 tacataaaaa acagcttgtg tatttgttga agttagtcac ttaaaataaa tgaaaaatag
     1561 tgttattta
//
