LOCUS       XM_003751319            1100 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ring finger protein 212 (Rnf212),
            transcript variant X1, mRNA.
ACCESSION   XM_003751319
VERSION     XM_003751319.5
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_003751319.6.
            
            On Jan 21, 2021 this sequence version replaced XM_003751319.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1100
                     /gene="Rnf212"
                     /note="ring finger protein 212; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 2 ESTs, 5 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     15 samples with support for all annotated introns"
                     /db_xref="GeneID:689721"
                     /db_xref="RGD:1588767"
     CDS             112..1035
                     /gene="Rnf212"
                     /codon_start=1
                     /product="probable E3 SUMO-protein ligase RNF212 isoform
                     X1"
                     /protein_id="XP_003751367.2"
                     /db_xref="GeneID:689721"
                     /db_xref="RGD:1588767"
                     /translation="MASWVFCNRCFQPPHRKSSFSLTSCGHVFCDSCILKGKKNECMI
                     CEVPCQTVLLSKHTNSNVQTFFLDIDGLCKKYSQEISQISEFQEKHRRRLVTFYREKI
                     SQLEESLRKSVLQIKQLQSMRSSQQPAFNTIKNSVSTKPNGYIFLPPNSSLPDRIESM
                     DIDLTSPARKPETAAGPSRISLISPPQDGRMGSASCRGPQHLSLTPSHASTAKAFRVP
                     PLQVPYKELSPLPASQLSSRATQAPSPSISSSWTGPPRQPISISGLLQRQSAGSASPR
                     GMNTEKMSPFLPSTPANLRSVASPWQVCVHR"
ORIGIN      
        1 tgagcgcagg cgcagagctg cctttctaag ctgtgcctgg tactgagggg agggtctgta
       61 tctctctgtg ccctcgctgg cctcgcgcga atcccacgtg ggtcctccgt catggccagc
      121 tgggtgttct gtaatcgctg tttccagccg ccgcacagga agtcgtcctt cagcctgacc
      181 agctgtgggc acgtgttctg cgattcctgc atcctgaaag gtaaaaagaa tgaatgcatg
      241 atctgtgaag tcccttgtca gacagtttta ctctcaaaac atactaactc caatgtccag
      301 acgttctttc tggacataga tggtctgtgc aagaagtatt cccaggagat ctctcagatt
      361 tcggaatttc aagaaaaaca caggaggagg ttagtgactt tctaccgaga aaagatttct
      421 cagttggaag agtccctcag aaagtcagta ctacaaatca agcaactaca aagtatgagg
      481 tcatcacaac aaccagcttt caacacaatc aaaaattcag tttcaacaaa gccaaatgga
      541 tatatctttc taccacccaa ctcttcactc cctgacagaa tagagtcgat ggatattgac
      601 ctgacttctc cagcaagaaa gcctgagaca gcagcaggcc cttcaagaat ttctctgatt
      661 agtccgcctc aggatggacg catgggcagt gcctcctgcc ggggacccca gcatctcagc
      721 ttgacaccaa gccatgcaag cacagcaaag gctttcagag taccaccatt gcaggtgccc
      781 tacaaggaac tgtcaccact tccagcatca cagctatcca gcagagcaac acaagctcct
      841 tcccccagca ttagcagttc atggacagga ccacctcggc agcccatcag tatctcaggc
      901 ctgctgcaga gacagagtgc agggtcagcg tcccctaggg ggatgaacac tgagaaaatg
      961 agcccattct tgccttccac gcctgcaaat ctacgctctg tagccagccc ctggcaagtg
     1021 tgtgttcatc ggtaaatatc actgtacagt tcattctaga gagatgatgt aactaaataa
     1081 agtagctttc tgataaagca
//
