LOCUS       NM_001008361            1882 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ring finger protein 167 (Rnf167), mRNA.
ACCESSION   NM_001008361 XM_340833
VERSION     NM_001008361.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Yamada,H.Y. and Gorbsky,G.J.
  TITLE     Tumor suppressor candidate TSSC5 is regulated by UbcH6 and a novel
            ubiquitin ligase RING105
  JOURNAL   Oncogene 25 (9), 1330-1339 (2006)
   PUBMED   16314844
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083670.1.
            
            On Dec 16, 2004 this sequence version replaced XM_340833.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083670.1, SRR8487227.279624.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q24"
     gene            1..1882
                     /gene="Rnf167"
                     /gene_synonym="RGD1305972"
                     /note="ring finger protein 167"
                     /db_xref="GeneID:360554"
                     /db_xref="RGD:1305972"
     exon            1..696
                     /gene="Rnf167"
                     /gene_synonym="RGD1305972"
                     /inference="alignment:Splign:2.1.0"
     CDS             613..1662
                     /gene="Rnf167"
                     /gene_synonym="RGD1305972"
                     /EC_number="2.3.2.27"
                     /note="E3 ubiquitin-protein ligase RNF167; RING-type E3
                     ubiquitin transferase RNF167"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase RNF167 precursor"
                     /protein_id="NP_001008362.1"
                     /db_xref="GeneID:360554"
                     /db_xref="RGD:1305972"
                     /translation="MHPAAFPLPVVVATVLWGAAPIRGLIRATSEHNASMDFADLPAL
                     FGATLSDEGLQGFLVEAHPENACSPIAPPPSAPVNGSVFIALLRRFDCNFDLKVLNAQ
                     KAGYGAAVVHNVNSNELLNMVWNSEEIQQQIWIPSVFIGERSAEYLRALFVYEKGARV
                     LLVPDNSFPLGYYLIPFTGIVGLLVLAMGTVLIVRCIQHRKRLQRNRLTKEQLKQIPT
                     HDYQKGDEYDVCAICLDEYEDGDKLRILPCAHAYHSRCVDPWLTQTRKTCPICKQPVH
                     RGPGDEEQEEETQGQEEEGDEGEPRDQPASEWTPLLGSSPTLPTSFGSLAPAPLVFPG
                     PSTDPSPSPSSAALA"
     exon            697..777
                     /gene="Rnf167"
                     /gene_synonym="RGD1305972"
                     /inference="alignment:Splign:2.1.0"
     exon            778..903
                     /gene="Rnf167"
                     /gene_synonym="RGD1305972"
                     /inference="alignment:Splign:2.1.0"
     exon            904..991
                     /gene="Rnf167"
                     /gene_synonym="RGD1305972"
                     /inference="alignment:Splign:2.1.0"
     exon            992..1082
                     /gene="Rnf167"
                     /gene_synonym="RGD1305972"
                     /inference="alignment:Splign:2.1.0"
     exon            1083..1188
                     /gene="Rnf167"
                     /gene_synonym="RGD1305972"
                     /inference="alignment:Splign:2.1.0"
     exon            1189..1282
                     /gene="Rnf167"
                     /gene_synonym="RGD1305972"
                     /inference="alignment:Splign:2.1.0"
     exon            1283..1363
                     /gene="Rnf167"
                     /gene_synonym="RGD1305972"
                     /inference="alignment:Splign:2.1.0"
     exon            1364..1866
                     /gene="Rnf167"
                     /gene_synonym="RGD1305972"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggagggggta agaggctggt gagcattctc gcgatacttg aacgtatcgc ggcggccaga
       61 agaaggagag gtttgtaaac aggtagctcc aagatctcag ggactaaggg aaaaaaatta
      121 gatcgtttgc tgagcaccgg agctcccttc atctccgcag gcacgctcta cgtgtcgaac
      181 atttctttca accggccttt ttggaccgga agtcctccgt cctgagcgtc caatactgga
      241 agcggccttt cttaccggaa atccttttcc aggggcatag gaagaaggcc tacctggccg
      301 gaagtcccac ctccttgaga tttctcccac ccagaagtta ttttttgtta cctgtttgcc
      361 ttcgttccta ttctgttcta cttctgtacc agagaaagat acattgtctc cctttccacc
      421 tccactaagc tggtttgata gctcacttcc cgaatcggag ttccttcccc gacgccccca
      481 tgtagctgag aagtgggacc taggggtggt tggacccctg ggatcctgaa ggagaggcag
      541 agaaggcgca ggacttggct tctgctcctg ctatcaggac gcgaccttcc cagctttacc
      601 cctcctgctg ccatgcaccc tgcggccttc ccgctccctg ttgttgtggc tactgtgctg
      661 tggggagcag cccctatccg agggcttatt cgagcgactt cggagcacaa tgccagcatg
      721 gactttgcag accttccagc tctatttggg gccactctga gcgatgaggg actccagggg
      781 ttccttgtgg aggcccaccc agaaaatgcc tgcagtccta ttgccccacc accctcagcc
      841 ccagtcaatg ggtcagtctt tattgcactg cttcgaagat tcgactgcaa ctttgacctc
      901 aaggtcctaa atgctcagaa agctgggtat ggtgcagctg tggtacacaa cgtgaattcc
      961 aatgaacttc taaacatggt gtggaatagt gaggaaatcc aacaacagat ctggatccca
     1021 tctgtattta tcggagagag aagtgcagag tacttacgag ctctttttgt ctacgagaag
     1081 ggggctcggg tgcttctggt cccagacaat agcttcccct tgggctatta cctcattcct
     1141 ttcactggga ttgtaggact gctggttttg gccatgggaa cagtattgat agttcgttgc
     1201 atccagcacc ggaaacggct tcaacggaac agacttacca aagagcaact gaaacagatt
     1261 cctactcatg attatcaaaa aggagatgag tatgatgtct gtgccatctg tctggatgag
     1321 tatgaggacg gggacaagct tcggatactt ccctgtgctc atgcttacca cagtcgctgt
     1381 gtggacccct ggctcactca gacccgcaag acctgcccta tctgtaaaca gcctgtccat
     1441 cgggggcctg gggatgagga acaggaagaa gaaactcaag ggcaagaaga ggaaggtgat
     1501 gaaggggagc caagagacca acctgcttca gaatggaccc cactcctagg ctctagccct
     1561 actcttccca cctcctttgg ctccctagct cctgctcccc tggtctttcc ggggccctcc
     1621 acagacccct caccttctcc ttcatctgct gccctggcct gacccaaccc ccatatttgg
     1681 cacctctggt gatctctttg cacaaacttt tccagtctaa taagctgagg atgagggata
     1741 ggggacattt ctaccccagg ttcatgaacc cagccttatc cttttgaggg ggctagaagc
     1801 catagggaca tggtcttcac ttcttggttc ttgaattaat aaaattgttt ttgtggatga
     1861 aaaaaaaaaa aaaaaaaaaa aa
//
