LOCUS       NM_001191093            1793 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ring finger protein 150 (Rnf150), mRNA.
ACCESSION   NM_001191093 XM_001067775
VERSION     NM_001191093.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1793)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000019.1.
            
            On Jul 17, 2010 this sequence version replaced XM_001067775.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.55580.1,
                                           SRR26643289.42507.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-487               JAXUCZ010000019.1  42132731-42133217   c
            488-738             JAXUCZ010000019.1  41995006-41995256   c
            739-810             JAXUCZ010000019.1  41981619-41981690   c
            811-893             JAXUCZ010000019.1  41979414-41979496   c
            894-990             JAXUCZ010000019.1  41962864-41962960   c
            991-1201            JAXUCZ010000019.1  41956068-41956278   c
            1202-1793           JAXUCZ010000019.1  41912276-41912867   c
FEATURES             Location/Qualifiers
     source          1..1793
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q11"
     gene            1..1793
                     /gene="Rnf150"
                     /gene_synonym="RGD1304572"
                     /note="ring finger protein 150"
                     /db_xref="GeneID:364983"
                     /db_xref="RGD:1304572"
     exon            1..487
                     /gene="Rnf150"
                     /gene_synonym="RGD1304572"
                     /inference="alignment:Splign:2.1.0"
     CDS             7..1320
                     /gene="Rnf150"
                     /gene_synonym="RGD1304572"
                     /codon_start=1
                     /product="RING finger protein 150 precursor"
                     /protein_id="NP_001178022.1"
                     /db_xref="GeneID:364983"
                     /db_xref="RGD:1304572"
                     /translation="MTMSLIQACRSLALSTWLLSFCFVHLLCLDFTVAEKEEWYTAFV
                     NITYTEPESGAAVAGGGGGAELHTEKSECGRYGEHSPKQDARGEVVMASSVHDRLACD
                     PNTKFAAPAHGKHWIALIPKGNCTYRDKIRNAFLQNASAVVIFNVGSNTNETITMPHA
                     GVEDIVAIMIPEPKGKELVSLLERNVTVTMYITIGTRNLQKYVSRTSVVFVSISFIVL
                     MIISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKAISKLQVRTIRKGDKETESDFDN
                     CAVCIEGYKPSDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNILKALGIPPNADCM
                     DDLPIDFEGSLGGPPTNQITGASDTTVNESSVTLDPAVRTVGALQVVQDPDPAPQEGE
                     AIFTTNSDQEPAVSSDSDISLIMALEVGLSDVELSTDQDCEEVKS"
     exon            488..738
                     /gene="Rnf150"
                     /gene_synonym="RGD1304572"
                     /inference="alignment:Splign:2.1.0"
     exon            739..810
                     /gene="Rnf150"
                     /gene_synonym="RGD1304572"
                     /inference="alignment:Splign:2.1.0"
     exon            811..893
                     /gene="Rnf150"
                     /gene_synonym="RGD1304572"
                     /inference="alignment:Splign:2.1.0"
     exon            894..990
                     /gene="Rnf150"
                     /gene_synonym="RGD1304572"
                     /inference="alignment:Splign:2.1.0"
     exon            991..1201
                     /gene="Rnf150"
                     /gene_synonym="RGD1304572"
                     /inference="alignment:Splign:2.1.0"
     exon            1202..1793
                     /gene="Rnf150"
                     /gene_synonym="RGD1304572"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agagagatga caatgtctct catccaagcg tgccgcagtc tggctctctc aacatggctg
       61 ctttcctttt gtttcgtgca tctgctctgc ctggacttca ccgtggcgga gaaggaggaa
      121 tggtacaccg ccttcgtgaa catcacctat acggagcccg agtccggggc cgcggtagcg
      181 ggcggtggtg gtggcgccga gctgcacaca gagaagagcg agtgcgggcg atacggcgag
      241 cactcgccca agcaggacgc gcgcggcgag gtggtcatgg ccagttcggt ccacgaccgc
      301 ctggcttgcg accccaacac caagttcgcg gcgccggccc acggcaaaca ctggatagcc
      361 ctcatcccca agggcaactg cacctacagg gataagatcc ggaacgcgtt tctgcagaac
      421 gcctccgccg tggtcatctt caacgtgggt tccaacacca acgagaccat caccatgccc
      481 cacgcaggtg tggaagacat cgtggctata atgattcctg agcccaaagg gaaggagcta
      541 gtgagtctgc tggagaggaa cgtcaccgtg accatgtaca tcaccatcgg cacccggaac
      601 ttgcaaaaat atgtgagccg cacgtcggtt gtgtttgtct ccatctcctt cattgtcctg
      661 atgatcattt ccctggcatg gctggtcttt tattacatcc agaggtttcg gtatgcaaat
      721 gccagggaca ggaaccagcg ccgactggga gatgccgcaa agaaagccat cagcaaactc
      781 caagtcagga ccatcaggaa gggtgacaag gaaacagagt ctgattttga taactgtgca
      841 gtctgcatag aaggatacaa gcccagcgat gtggtcagga tcctgccctg ccggcatctt
      901 ttccacaagt cctgtgtgga cccctggctt ctagaccatc gcacctgccc catgtgcaag
      961 atgaacattc ttaaggccct agggatcccg cccaatgctg actgcatgga cgacttgccc
     1021 attgatttcg agggctctct aggaggccca ccaaccaatc agatcacagg agccagtgat
     1081 acaactgtca atgaaagctc agtcactctg gaccctgctg tgcggacagt aggagccctg
     1141 caggtggtcc aggacccaga ccccgctcct caggagggag aagccatctt tacaactaac
     1201 agtgaccaag agccagcagt gagcagtgat tctgacatct cgttaattat ggccctggaa
     1261 gtggggctgt ctgatgtaga actttccacc gaccaagact gcgaggaggt gaaatcttga
     1321 gaaggtagaa atggacaaaa agaagacata ggaaccaggg ggacaggaag gaagcatgct
     1381 ccgagaattg aactggatac acggccttcg ggtcaccatg gcaacccctt caggtcacca
     1441 tggaaacctt gaactctgtt caggggcagt acgaaagcaa tatccaaagt ctccagagtc
     1501 aggactcggg ttcccatctc tgcgacagcc tgtggccttg atgtgggagt tgaaagctgg
     1561 atcccttggt gtctgtgcac acacggcaaa ccggaaggag accttcacag cttcttcact
     1621 tgatttcagc ctctcccgtc ttcttgctct tgtttgggaa agacggtttc ggtccctcag
     1681 caatttcttt ttaaagttga tgtgtagttt ccaaatcaat ccctctgttt tccctttgat
     1741 tcaccccagc ccgtgtacag aggtcagttt agaaattctg gttgctgctc tga
//
