LOCUS       XM_006254639            3052 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ring finger protein 14 (Rnf14),
            transcript variant X7, mRNA.
ACCESSION   XM_006254639
VERSION     XM_006254639.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006254639.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006254639.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3052
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3052
                     /gene="Rnf14"
                     /gene_synonym="ARA54"
                     /note="ring finger protein 14; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 67 ESTs, 6 long SRA reads, 3 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 197 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:619577"
                     /db_xref="RGD:1589576"
     CDS             825..1886
                     /gene="Rnf14"
                     /gene_synonym="ARA54"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase RNF14 isoform X2"
                     /protein_id="XP_006254701.1"
                     /db_xref="GeneID:619577"
                     /db_xref="RGD:1589576"
                     /translation="MQFLKEETLTYLNIVSPFELKMGSQKKVQRRTTAQASSNTELAL
                     GGAAAAAAASDVDQEDSVDERAVQDVESLSSLIQEILDFNQDRQMKCFNSKLFLCSIC
                     FCEKLGSDCMYFLECRHVYCKACLKDYFEIQIKDGQVKCLNCPEPQCSSVATPGQVKE
                     LVEADLFARYDRLLLQSTLDLMADVVYCPRPCCQLPVMQEPGGTMAICSSCNFAFCTL
                     CRLTYHGVSPCKVTAEKLIDLRNEYLQADEATKRFLEQRYGKRVIQKALEEMESKDWL
                     EKNSKSCPCCGTPIQKLDGCNKMTCTGCMQYFCWVCMGSLSRANPYKHFTDPDSPCFN
                     RLFHAVDVNGDIWEDEIED"
ORIGIN      
        1 cggcatccgc ccctctcagc tgacagctct ggagacggaa gaggcggttc tcaggtggtg
       61 cccggtgact gcaggcctgg ctggctagcg tgttgcgagg gccccagtca agggcatact
      121 gcggaacttt cgggcccggc tcagctaagc ggccggaaga tggcagaatt tctgtagtat
      181 attggatgca aatcccacat cttggtttct tatccagctt cagtctagct tcactggcta
      241 gaaaataaat gggatttgca caaattccaa gccacagtga aataacgctt gcagcattga
      301 tatccttttc tcctcgttgt tactaacaga aaattcaatg tcggcagaag acctggaagc
      361 ccaggaggat gaactactgg ccctggcaag tatttatgat ggagatgagt ttagaaaagc
      421 agagtctgtc caaggagggg aaaccaggat ctatttggat ctgccacaga atttcaagat
      481 attcgtgagc ggcaattcaa atgagtgtct ccagaatagt ggctttgaat acaccatttg
      541 ctttctgcca ccacttgtgc tgaactttga actgccacca gattatccat cctcctcccc
      601 accttcattc acacttagtg gcaaatggct gtcaccaact cagcccattt actattcata
      661 tgagcctcac aaatttctgt tggatagatt tgttatagga agtgcagtta atccaaaaga
      721 ggaacagaag ggtatgggag aagagaacac agctctctgc tctctgcaag cacctggaca
      781 acctgtggga agaacaccga ggccgtgtgg tgctgtttgc ctggatgcag tttcttaagg
      841 aggagaccct tacctacctg aatattgtct ctccttttga gctcaagatg gggtctcaga
      901 aaaaggttca gagaaggaca acagctcagg cctcttccaa cacagagctt gctttgggag
      961 gagctgctgc tgctgctgct gcgtcagatg tagaccaaga agacagtgtg gatgagagag
     1021 ctgtacagga tgtagaatca ttgtcaagtc tgatccagga aatcttggac ttcaatcaag
     1081 atcgacagat gaagtgcttc aatagtaaac tgttcttgtg cagtatctgt ttctgtgaga
     1141 agctggggag tgattgtatg tacttcttgg agtgcagaca tgtatattgc aaagcctgtc
     1201 tgaaggatta ctttgaaatc cagatcaaag atggtcaagt taaatgcctc aactgtccag
     1261 aaccacagtg ttcttcggtg gctactcctg gtcaggtcaa agagctggta gaagcagact
     1321 tatttgctcg ctatgaccgc ctcctcctcc agtctacttt ggatctaatg gcagatgtgg
     1381 tgtattgtcc ccgtccatgc tgccagctcc ctgtgatgca agagcctggt ggcaccatgg
     1441 ctatctgctc cagctgcaat tttgccttct gcaccttatg cagactgacc tatcacgggg
     1501 tttctccatg taaggtaacg gcagagaaat taatagactt acggaatgaa tacctacaag
     1561 cagatgaagc tactaaaagg ttcttggaac agaggtatgg caagagggtg attcagaagg
     1621 ccctggagga gatggagagt aaagactggc tggagaagaa ctccaagagc tgcccctgct
     1681 gtggaacgcc catacagaaa ttagacggct gcaacaagat gacctgtact ggctgtatgc
     1741 agtatttctg ctgggtttgc atgggctctc tctcaagagc aaacccttac aaacatttca
     1801 ctgatcctga ttctccatgc tttaacaggt tgttccatgc cgtggatgtc aatggagaca
     1861 tttgggaaga tgagattgag gactagttca ttcctgctcg caatgtagaa atggaatggt
     1921 ttgccctgac cttctgtcaa gtacacaaag agccctcgca ggatatttag ggtaccatct
     1981 attcactctt cagtgtagaa ggaagaacag ggtttatatt ttcctttggt tctactgatt
     2041 aaggcacgta catttccatg taacataatc tgataaaatt atatgccaaa ggatcagaaa
     2101 tgaaaactat agattaaata ttataatatg cccaaactgt gaatagttaa aaagtaaata
     2161 tttattttct cccccaagct ttaggttagg gagagggtca agagttaagc ttttagacca
     2221 tgtccaagaa gcccctgcag ctggggacag tcacagcccc agccacactg tcctgggagc
     2281 ctgatccatt ctctgtacac tgctcatttc cattcgtgct ttggagagag cctctgctct
     2341 gtaactgacc aaatgtccag tgttgttctg ttgtactgct tgccagaata gaaatctata
     2401 ataaattaaa aaatattttt agtattataa tccctgtggg tcacttgata tttatgaata
     2461 gtgtattgaa tcccctggtt tagagccaaa tgtagaattt aggattctgg ctcagaattc
     2521 ctctagattc agagtcagag ctgtctgtgc tcccttttgt tctcagcttt ctccctttgc
     2581 ctcccacctt ctgttggcaa gtacagtttt aatgttgatt acagcagtgt gtgtctttat
     2641 ttcctctgct agaatagaaa agagcccaat atattcctca tgaatgctct ctgaacctgt
     2701 gaacagcatc atggttctac cccaccttct gaacactcgg gaattgggct tcctcccctc
     2761 ccctcccctc gtagacagca gtgtttggag tgataatagt agcttgatag ctagattcct
     2821 aaccctggct tttattggct ttttgaaaaa ctgtcttcct cctgattccc taagtggctt
     2881 ggtgtagtca cttggtggat gttttggaaa ggacagtaac tcacctgtag cttgtgaact
     2941 tgtgttttct actgtgacat tgaaaattaa ggattgctta actgtcagct caaactgttg
     3001 ctggattgtc aatgaggatg cttaatctta acaataaagt aatttaaaat ca
//
