LOCUS       NM_001037658            1453 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus ring finger protein 130 (Rnf130), mRNA.
ACCESSION   NM_001037658
VERSION     NM_001037658.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1453)
  AUTHORS   Guais,A., Siegrist,S., Solhonne,B., Jouault,H., Guellaen,G. and
            Bulle,F.
  TITLE     h-Goliath, paralog of GRAIL, is a new E3 ligase protein, expressed
            in human leukocytes
  JOURNAL   Gene 374, 112-120 (2006)
   PUBMED   16549277
REFERENCE   2  (bases 1 to 1453)
  AUTHORS   Guais,A., Solhonne,B., Melaine,N., Guellaen,G. and Bulle,F.
  TITLE     Goliath, a ring-H2 mitochondrial protein, regulated by luteinizing
            hormone/human chorionic gonadotropin in rat leydig cells
  JOURNAL   Biol Reprod 70 (1), 204-213 (2004)
   PUBMED   13679316
REFERENCE   3  (bases 1 to 1453)
  AUTHORS   Baker,S.J. and Reddy,E.P.
  TITLE     Cloning of murine G1RP, a novel gene related to Drosophila
            melanogaster g1
  JOURNAL   Gene 248 (1-2), 33-40 (2000)
   PUBMED   10806348
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001037658.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY190520.1, SRR26643292.40105.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-274               JAXUCZ010000010.1  34844285-34844558
            275-469             JAXUCZ010000010.1  34873314-34873508
            470-720             JAXUCZ010000010.1  34896264-34896514
            721-792             JAXUCZ010000010.1  34915460-34915531
            793-875             JAXUCZ010000010.1  34917129-34917211
            876-972             JAXUCZ010000010.1  34923786-34923882
            973-1177            JAXUCZ010000010.1  34925844-34926048
            1178-1271           JAXUCZ010000010.1  34929334-34929427
            1272-1453           JAXUCZ010000010.1  34934488-34934669
FEATURES             Location/Qualifiers
     source          1..1453
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q22"
     gene            1..1453
                     /gene="Rnf130"
                     /note="ring finger protein 130"
                     /db_xref="GeneID:652955"
                     /db_xref="RGD:1562041"
     exon            1..274
                     /gene="Rnf130"
                     /inference="alignment:Splign:2.1.0"
     CDS             28..1287
                     /gene="Rnf130"
                     /EC_number="2.3.2.27"
                     /note="goliath homolog; E3 ubiquitin-protein ligase
                     RNF130; R-goliath"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase RNF130 precursor"
                     /protein_id="NP_001032747.1"
                     /db_xref="GeneID:652955"
                     /db_xref="RGD:1562041"
                     /translation="MSGAARAGPARLAALALLTCSLWPTRADNASQEYYTALINVTVQ
                     EPGRGTPLTFRIDRGRYGLDSPKAEVRGQVLAPLPIHGVADHLGCDPQTRFFVPPNIK
                     QWIALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITEL
                     RGKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFI
                     QKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDV
                     VRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPNLPCTDNVAFDMERLTRT
                     QAVNRRSALGDLANDSSLGLEPLRTSGISPLPQDGELTPRTGEINIAVTKEWFIIASF
                     GLLSALTLCYMIIRATASLNANEVEWF"
     exon            275..469
                     /gene="Rnf130"
                     /inference="alignment:Splign:2.1.0"
     exon            470..720
                     /gene="Rnf130"
                     /inference="alignment:Splign:2.1.0"
     exon            721..792
                     /gene="Rnf130"
                     /inference="alignment:Splign:2.1.0"
     exon            793..875
                     /gene="Rnf130"
                     /inference="alignment:Splign:2.1.0"
     exon            876..972
                     /gene="Rnf130"
                     /inference="alignment:Splign:2.1.0"
     exon            973..1177
                     /gene="Rnf130"
                     /inference="alignment:Splign:2.1.0"
     exon            1178..1271
                     /gene="Rnf130"
                     /inference="alignment:Splign:2.1.0"
     exon            1272..1453
                     /gene="Rnf130"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggcggcgg cggcggccgg agggacgatg agcggcgcgg cgcgggcggg cccggcccgg
       61 ctcgcggcgc tggccctgct gacctgcagc ctgtggccga cgcgagcgga caacgcgagc
      121 caggagtact acacggcgct catcaacgtg acggtgcagg agcccggccg cggcacccct
      181 ctcacgttcc gcatcgaccg cgggcgctac gggctcgact cacccaaggc cgaggtccgc
      241 ggccaggtgc tggcaccgct gcccatccac ggagttgctg atcatctggg ctgtgatcct
      301 caaacacggt tctttgtccc tcctaatatc aaacagtgga tcgccttgct ccaaagagga
      361 aattgcacct ttaaagaaaa aatatcacgg gctgcttttc acaatgcggt tgctgtagtc
      421 atctacaata ataaatccaa agaggagcca gtcaccatga ctcatccagg cacgggagat
      481 attattgctg tcatgataac agaattgagg ggtaaggata ttttgagtta tctggagaaa
      541 aacatctctg tacaaatgac aatagctgtt ggaactcgaa tgccgccaaa gaacttcagc
      601 cgtggctctc tagtcttcgt gtcaatatcc tttattgttt tgatgattat ttcttcagcg
      661 tggctcatat tctacttcat tcagaagatc aggtatacaa atgctcgcga caggaaccag
      721 cgtcgtcttg gagacgcagc caagaaagcc atcagtaaat tgacaactag aacggtgaaa
      781 aagggcgata aggaaacaga cccagacttc gatcactgtg cagtctgcat agagagctat
      841 aagcagaatg atgttgttcg ggttctcccc tgcaagcatg ttttccacaa atcctgtgtg
      901 gatccctggc tcagtgaaca ctgtacctgc cctatgtgta aacttaatat tttgaaagcc
      961 ctaggaattg tgccaaatct gccatgtact gataatgtag cgtttgatat ggaaaggctc
     1021 accagaaccc aggcagttaa ccgaagatca gcccttggtg accttgccaa tgacagttcc
     1081 cttggccttg agccactgag aacttctggg atatcgcctc ttcctcaaga tggggagctc
     1141 actcctcgaa cgggtgaaat caacattgca gtaacaaaag aatggtttat tattgccagt
     1201 tttggcctcc tcagtgctct cacactctgc tacatgatca tcagagccac agctagcttg
     1261 aatgctaatg aggtagaatg gttttgaaga aggaaaacac tgctttctga ctgattgcct
     1321 tgaaggaaaa aagaacctat ttttgtgcat catttaccaa tcatgccaca caagcgttta
     1381 tttttagtac attttatttt ttcataaaat tgctaatgcc aaagctttgt attaaaataa
     1441 ataaataata aaa
//
