LOCUS       NM_001001517            2139 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus ring finger protein 114 (Rnf114), mRNA.
ACCESSION   NM_001001517 XM_342586
VERSION     NM_001001517.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2139)
  AUTHORS   Ebstein,F., Lange,N., Urban,S., Seifert,U., Kruger,E. and
            Kloetzel,P.M.
  TITLE     Maturation of human dendritic cells is accompanied by functional
            remodelling of the ubiquitin-proteasome system
  JOURNAL   Int J Biochem Cell Biol 41 (5), 1205-1215 (2009)
   PUBMED   19028597
REFERENCE   2  (bases 1 to 2139)
  AUTHORS   Ma,Y.X., Zhang,S.Z., Hou,Y.P., Huang,X.L., Wu,Q.Q. and Sun,Y.
  TITLE     Identification of a novel human zinc finger protein gene ZNF313
  JOURNAL   Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao (Shanghai) 35 (3),
            230-237 (2003)
   PUBMED   12621547
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001001517.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY603473.1, BC098633.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-162               JAXUCZ010000003.1  176641499-176641660
            163-313             JAXUCZ010000003.1  176645302-176645452
            314-420             JAXUCZ010000003.1  176649074-176649180
            421-535             JAXUCZ010000003.1  176649386-176649500
            536-643             JAXUCZ010000003.1  176650942-176651049
            644-2139            JAXUCZ010000003.1  176651767-176653262
FEATURES             Location/Qualifiers
     source          1..2139
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q42"
     gene            1..2139
                     /gene="Rnf114"
                     /gene_synonym="Zfp313; Znf313"
                     /note="ring finger protein 114"
                     /db_xref="GeneID:362277"
                     /db_xref="RGD:1303139"
     exon            1..162
                     /gene="Rnf114"
                     /gene_synonym="Zfp313; Znf313"
                     /inference="alignment:Splign:2.1.0"
     CDS             20..709
                     /gene="Rnf114"
                     /gene_synonym="Zfp313; Znf313"
                     /EC_number="2.3.2.27"
                     /note="zinc finger protein 313; RING-type E3 ubiquitin
                     transferase RNF114"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase RNF114"
                     /protein_id="NP_001001517.1"
                     /db_xref="GeneID:362277"
                     /db_xref="RGD:1303139"
                     /translation="MAAAQPESRDGAAQSAKPASETDPLSRFTCPVCLEVFEKPVQVP
                     CGHVFCSACLQECLKPKKPVCGVCRSALAPGVRAAELERQIESIETSCHGCRKDFVLS
                     KIRAHVASCSKYQSYIMEGVKATTKDASLQQRNVPNRYTFPCPYCPEKNFDQEGLVEH
                     CKLTHSTDTKSVVCPICASMPWGDPSYRSANFMEHIQRRHRFSYDTFVDYDVDEDDMI
                     NQVLQRSIIDQ"
     exon            163..313
                     /gene="Rnf114"
                     /gene_synonym="Zfp313; Znf313"
                     /inference="alignment:Splign:2.1.0"
     exon            314..420
                     /gene="Rnf114"
                     /gene_synonym="Zfp313; Znf313"
                     /inference="alignment:Splign:2.1.0"
     exon            421..535
                     /gene="Rnf114"
                     /gene_synonym="Zfp313; Znf313"
                     /inference="alignment:Splign:2.1.0"
     exon            536..643
                     /gene="Rnf114"
                     /gene_synonym="Zfp313; Znf313"
                     /inference="alignment:Splign:2.1.0"
     exon            644..2139
                     /gene="Rnf114"
                     /gene_synonym="Zfp313; Znf313"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gacgctcctc agcggcaaga tggcggcggc gcagccggag tcccgcgacg gagccgcgca
       61 gtcggcgaag ccggcgtccg aaactgaccc tctcagccgc tttacgtgtc ccgtgtgcct
      121 ggaagtgttc gagaagcccg tgcaggtgcc ctgcggacac gtcttttgct ctgcatgcct
      181 gcaggaatgt ctgaagccga agaagcctgt ctgtggcgtg tgccgcagtg ctctggcgcc
      241 tggcgtccgg gctgcggagc tggagcggca gatcgagagc atagagacct cttgccatgg
      301 ctgccgtaag gattttgtcc tatctaagat ccgggcccac gtggcttcat gttccaaata
      361 ccagagttac atcatggaag gtgtaaaggc cactaccaag gatgcatccc ttcagcagag
      421 aaatgtccca aaccgataca cctttccttg tccttattgt cccgagaaga actttgatca
      481 ggaaggactt gtggagcact gcaaactcac tcacagcacg gataccaagt ctgtggtttg
      541 tcccatatgt gcctcgatgc cctggggaga ccccagctac cgcagtgcca acttcatgga
      601 gcatatccag cgccgccacc gcttttccta cgacactttt gtggattatg atgttgacga
      661 agatgacatg ataaaccagg tgttacaacg ctccatcatc gaccaatgaa cagggtcctg
      721 gctgtccact tcactctaga gcttccatta tgcattaggt gtgagccctt gactcttgta
      781 cctcacatgt aatgcagatg tggaattgag ccatggcacc agacagggtc acttcaaggg
      841 tgacggggcc ctagggcaga gagagccctg tttcctctgg gctcttgtca gcattgtctt
      901 ccccactgat aaccttgttt gtcccatggt ctgcttttac tgcacctcag ctactgcctc
      961 ctttaagaag agttcaactg cttctcccac acaatcttcc ttcacattca tcctgttgtc
     1021 cagtgttctc tctcaggtcc tcctagccag tcaggacctt ccctgggcag tgactagcac
     1081 aataaagcag ggactcctcc ttcccttggc cctgaggtgc cttggttctg cggtttactg
     1141 ggccagggct ctgctcctct tctccggggt gacatagcag tctgctgatg gaggaagttt
     1201 tggttactgc tgttttccta cacccgcacc tccatccgta tacctgatgg cttctgtcct
     1261 aaatgcctga ctgtgccttt ttaggacaaa gtgtcaccat agagttgtag tgaagatgct
     1321 gggtagcgaa gatgggtgtg ttcatctctg agtagagaga aggtggagag gtggcctttt
     1381 gcttttcttt gatgccgatg agtgttctca ggtggctggg tcaggtgccc tctgttgagt
     1441 gtctgctgac atttcttgct ctgagagtgt attggaggga ggctctgact gctgtgtgct
     1501 gcttagtaac ttaatggacc tgagcagtat cgctgcctcc ctgagcaagc ctgcgtttta
     1561 accctgcctt tcagtttgga aagcgtggta aagctgggtc atgtccctgg gaagttaaga
     1621 aagttagacc tctgcacagg agggagggag gggtctgctg caggctttcc tgagcagtag
     1681 ctggggatgc agcacattag gacaccactg gtctaaccac agagcagacc ctcggacaga
     1741 ctagagcttt ggggtgagtt ctttccagcc atgtggctct ggtttgtccg agactgcatg
     1801 cagcattgtg cttctgactg cacacctcca cagtggcatc tctgcctgcc agggcgaagc
     1861 cagctcagat gccagcagag tcagtccagg attattctcc caacgtccct gcttcttcac
     1921 tgtactctgg aaaggtttgc tcaggagatg tatggaggga ggtttggtga gaccttgccc
     1981 tgaggaactg agaaaagcac agctgtgcca cagtgcagca ggagcctctt gtcctgcatc
     2041 acactcactg tttctaatga aatgactttc cagaaggatg gctatgttct ggcttttagg
     2101 aggtgaaata taaataaatt tcataattta tgcaaccag
//
