LOCUS       NM_001017473            1806 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus required for meiotic nuclear division 5 homolog B
            (Rmnd5b), mRNA.
ACCESSION   NM_001017473 XM_573086
VERSION     NM_001017473.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1806)
  AUTHORS   Pfirrmann T, Villavicencio-Lorini P, Subudhi AK, Menssen R, Wolf DH
            and Hollemann T.
  TITLE     RMND5 from Xenopus laevis is an E3 ubiquitin-ligase and functions
            in early embryonic forebrain development
  JOURNAL   PLoS One 10 (3), e0120342 (2015)
   PUBMED   25793641
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC093386.1.
            
            On Apr 29, 2005 this sequence version replaced XM_573086.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC093386.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1806
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q22"
     gene            1..1806
                     /gene="Rmnd5b"
                     /note="required for meiotic nuclear division 5 homolog B"
                     /db_xref="GeneID:497900"
                     /db_xref="RGD:1559511"
     exon            1..137
                     /gene="Rmnd5b"
                     /inference="alignment:Splign:2.1.0"
     exon            138..323
                     /gene="Rmnd5b"
                     /inference="alignment:Splign:2.1.0"
     CDS             185..1366
                     /gene="Rmnd5b"
                     /EC_number="2.3.2.27"
                     /note="protein RMD5 homolog B"
                     /codon_start=1
                     /product="E3 ubiquitin-protein transferase RMND5B"
                     /protein_id="NP_001017473.1"
                     /db_xref="GeneID:497900"
                     /db_xref="RGD:1559511"
                     /translation="MEQCACVERELDKVLHKFLTYGQHCEQSLEELLHYVGQLRAELA
                     SAALQGTPLSATLSLVMSQCCRKIKDTVQKLASDHKDIHSSVSRVGKAIDRNFDSEIC
                     GVVSDAVWDSREKQQQILQMAIVEHLYQQGMLSVAEELCQESTLNVDLDFKQPFLELN
                     RILEALHEQDLGPALEWAVSHRQRLLELNSSLEFKLHRLHFIRLLAGGPEKQLEALSY
                     ARHFQPFARLHQREIQVMMGSLVYLRLGLEKSPYCHLLDNSHWAEICETFTRDACSLL
                     GLSVESPLSVSFASGCVALPVLMNIKAVIEQRQCTGVWSHKDELPIEIELGMKCWYHS
                     VFACPILRQQTSDSNPPIKLICGHVISRDALNKLINGGKLKCPYCPMEQNPADGKRII
                     F"
     exon            324..469
                     /gene="Rmnd5b"
                     /inference="alignment:Splign:2.1.0"
     exon            470..610
                     /gene="Rmnd5b"
                     /inference="alignment:Splign:2.1.0"
     exon            611..711
                     /gene="Rmnd5b"
                     /inference="alignment:Splign:2.1.0"
     exon            712..878
                     /gene="Rmnd5b"
                     /inference="alignment:Splign:2.1.0"
     exon            879..1044
                     /gene="Rmnd5b"
                     /inference="alignment:Splign:2.1.0"
     exon            1045..1147
                     /gene="Rmnd5b"
                     /inference="alignment:Splign:2.1.0"
     exon            1148..1302
                     /gene="Rmnd5b"
                     /inference="alignment:Splign:2.1.0"
     exon            1303..1776
                     /gene="Rmnd5b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cagcctgtga gctccgggta ccggggtgcg gggcgccccg accaaagcct ggagaaattg
       61 tcggccacac cctccaaggg ctggtggagt cgcccggact cagacgtccc attttagtgc
      121 acctgactgg gtcagaggat ccacactggc ctaatccagt tgacatcact aggcagaggc
      181 caccatggag cagtgcgcat gtgtggagag ggagctcgac aaggtcctgc acaagttcct
      241 gacctatggg caacattgtg agcagagcct ggaggagctg ctgcactacg tgggccagtt
      301 gagagctgaa ctggccagtg cagctctcca ggggacccct ctctcagcca cgctgtccct
      361 agtaatgtcc cagtgctgtc ggaagatcaa agacacagtc cagaagctgg cttccgacca
      421 taaggacatt cacagcagcg tctcccgagt gggcaaagcc attgaccgga actttgactc
      481 tgagatctgc ggcgtggtct cagatgctgt gtgggactcc cgtgagaagc agcagcagat
      541 cctgcagatg gccattgtcg agcacctgta ccagcagggc atgctcagcg tagctgagga
      601 gctgtgccag gaatcaacat tgaatgtgga cctggacttc aagcagccct tcttggagtt
      661 gaatcggatc ttggaggctc tgcatgagca agacctagga cctgcactgg aatgggccgt
      721 ttcccacagg cagcgcctgc tggagctcaa cagctcactg gagttcaagc tgcaccggct
      781 gcactttatc cgcctcctag ctggtggccc ggagaagcag ctggaggccc tcagctatgc
      841 ccgacacttc cagccttttg ctcggctaca ccagagagag atccaggtga tgatgggcag
      901 tctggtgtac ctgcggctgg gcttggagaa gtcaccctac tgccacctct tagacaacag
      961 ccactgggca gagatctgtg agacctttac tcgggatgca tgctccctcc tggggctttc
     1021 agtggagtcc ccactcagtg tcagctttgc ttctggctgt gtggcactgc cagtgctgat
     1081 gaacattaaa gctgtgatcg aacagaggca gtgcactgga gtgtggagtc acaaggatga
     1141 gttgccgatt gagattgagc tgggcatgaa gtgctggtat cactctgtgt ttgcgtgccc
     1201 tatcctgcga cagcagacct cagattccaa cccccctatc aagctcatct gtggccacgt
     1261 catctccaga gatgcactca acaagctcat caatggagga aagctaaagt gtccctattg
     1321 tcccatggag cagaacccag cagatgggaa acgtatcata ttctgattcc aaggaacatt
     1381 ttagaaggtg taatccaccc atgggccttt gtggagggac tggcttcagc agactgtgat
     1441 gcctttcaga ccagcattac caagagaccc aacctgccca ggcagaggcc agggaaggtc
     1501 ttgaaccagc ctatgccact ttacctgtga gggggactgg ctgttctgtt cctgctgcct
     1561 ttctgtttac acttgcccct gactgagcag caaatgcctt ggccatgaaa tgtagacatc
     1621 tttctaattc tgctgtcaaa ccaggggttt ccagccgtgg cccacctcct actgtacagt
     1681 ctcaactgta tctacccatt ctccactgta aatagcccgt tagaatgaat gctgttttat
     1741 aactttgagc aaatatattc acagcccttc tccttaaaaa aaaaaaaaaa aaaaaaaaaa
     1801 aaaaaa
//
