LOCUS       NM_001400627            3101 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus RecQ mediated genome instability 1 (Rmi1),
            transcript variant 2, mRNA.
ACCESSION   NM_001400627 XM_039096369
VERSION     NM_001400627.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3101)
  AUTHORS   Suwa,A., Yoshino,M., Yamazaki,C., Naitou,M., Fujikawa,R.,
            Matsumoto,S., Kurama,T., Shimokawa,T. and Aramori,I.
  TITLE     RMI1 deficiency in mice protects from diet and genetic-induced
            obesity
  JOURNAL   FEBS J 277 (3), 677-686 (2010)
   PUBMED   20050919
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000017.1.
            
            On Jan 26, 2022 this sequence version replaced XM_039096369.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643288.56656.1,
                                           SRR26643291.38813.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-235               JAXUCZ010000017.1  6269017-6269251     c
            236-831             JAXUCZ010000017.1  6266653-6267248     c
            832-916             JAXUCZ010000017.1  6265095-6265179     c
            917-3101            JAXUCZ010000017.1  6261961-6264145     c
FEATURES             Location/Qualifiers
     source          1..3101
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p14"
     gene            1..3101
                     /gene="Rmi1"
                     /gene_synonym="RGD1310671"
                     /note="RecQ mediated genome instability 1"
                     /db_xref="GeneID:306734"
                     /db_xref="RGD:1310671"
     exon            1..235
                     /gene="Rmi1"
                     /gene_synonym="RGD1310671"
                     /inference="alignment:Splign:2.1.0"
     exon            236..831
                     /gene="Rmi1"
                     /gene_synonym="RGD1310671"
                     /inference="alignment:Splign:2.1.0"
     exon            832..916
                     /gene="Rmi1"
                     /gene_synonym="RGD1310671"
                     /inference="alignment:Splign:2.1.0"
     exon            917..3101
                     /gene="Rmi1"
                     /gene_synonym="RGD1310671"
                     /inference="alignment:Splign:2.1.0"
     CDS             946..2799
                     /gene="Rmi1"
                     /gene_synonym="RGD1310671"
                     /note="RMI1, RecQ mediated genome instability 1, homolog"
                     /codon_start=1
                     /product="recQ-mediated genome instability protein 1"
                     /protein_id="NP_001387556.1"
                     /db_xref="GeneID:306734"
                     /db_xref="RGD:1310671"
                     /translation="MSVASAVLRVETWLLATWNIKVPLMWLEACVNWIQEENNSANLS
                     QAQINKQVLEQWLLTDLRDLEHPLLPDDILEIPKGELNGFYALQINSLVDVSQPAYSQ
                     IQKLRGKSTTNDLVSAETQTAPEPWQVRPSRMLMLQLTDGVTQVQGMEYQSIPALHSA
                     LPPGTKILVHGHILFRLGVLLLKAENVKVLGGEVDGLAEEYAQEKILARLIGEPDPTV
                     SVIPNNSNPSAPRVSGDLDAALGPSDEELLASLDESEEPAASDDVTVGRLSFSTGPSS
                     DTAPTIQTGFEPGCNISSRPKEKLPNQPVHFTDGEFDDFSLEEALLLEETVQKEKMEA
                     KASQPLSLKESVGKRVEEAFSPRPGGLNHTASTHKQGNSHFSEKTSEQMIHEDTLFDC
                     SSTRHHRKRLLAHDFTKDSKISEVDDVAQQTTNSSDVHCLSNKMLNRKPDLSEKSSQH
                     SKGNGHPFQTCSSRSFENNTNLSIGMDLHCPPFIYLSVLMARKPKEVTTVKVKAFIVT
                     LTGNLSSSGGFWCVTAKVSDGTAYLDVDFIDEILTSMIGYSVPEMKQLKKDPLKYKKF
                     LEGLQKCQRDLIDLCCLMTVSYDPSSCKGMVLELQDVGVEHLENLKKRLNK"
ORIGIN      
        1 gctgctcacg tgtgcgggga aagggggcgg ccgcggggga ttttcgagcc ccgagggagt
       61 tgggcggggg ctggaggagg aggagggacg cccgagcgcg gcggattggg cgggaagaag
      121 tgaaaagaga ggggaagaga aaaccctagg aacaggaaag ggagagcacc gggcggcgcg
      181 cggccccggg atcacgctac tgccgctgtc gtgcgaggcg aggcggcaag gccagggctt
      241 ctctgtgtat ccctggctgg agctccctct gtagacccag gctgtcctca atctcagctt
      301 cgattgcctc tgcctccgag tactgggata aagaagtgtg ttgctgctgg ccagtccggc
      361 ttcatgatca cttacgtcag tgctaataca tcacttttta cctctgactt tctttttgga
      421 ttaccttcca agaatcctga agttatcttg gtgtctttaa caagtcaaaa ataggtgttt
      481 ttttcttttt tttaacatat tggatgtgtg actgtgcaca catggctata caagcaagtg
      541 ggagccacag ccagccttgt ggagttggtt ctctcctcta cccattggac cataggagtg
      601 gactcattta ttacgtttgg tggcaggacc tttaccctaa gccatcttcc tggcccaact
      661 taatttttag aagaaaatag aaacataaaa tgaatataaa tatttgttac tgatttaaga
      721 tctcacctat tgattgaaca tcacatacaa tatctaggga tagtattcta ttaaaaaatt
      781 tgaatctgat tgaaaactaa tcatggagtc aagtatgcct aaaccttagt gagtcatttc
      841 tctgcagaag aggctttgag tactgaccat ccagcgtgaa atccggtcat tagatcttag
      901 gctgtcctgc taagtggtgg atgtggatgc tcctatttaa aagaaatgag tgtagctagt
      961 gctgtattaa gagtcgaaac ctggcttttg gcaacatgga atattaaagt gcctctgatg
     1021 tggctggaag cttgtgttaa ctggatccaa gaagaaaata atagtgctaa cttgagtcag
     1081 gcacaaataa ataagcaagt gttagagcaa tggcttctta ctgacctgag agacctggaa
     1141 catcctctct tacctgatga cattttagaa attccaaagg gagaactgaa tgggttttat
     1201 gctctacaga tcaattcctt ggttgacgta agtcagcctg cgtattccca gatacaaaag
     1261 ctgagaggaa agagtacaac caatgatcta gtgtcagcgg aaacgcagac ggccccagag
     1321 ccatggcaag taaggccttc tcggatgctg atgctgcagc tcactgacgg tgtcacacaa
     1381 gtccagggga tggaatacca gtctattccc gctctccaca gtgctcttcc tccaggtaca
     1441 aagatcctag ttcatgggca cattttgttc cgccttggtg ttctcttact gaaggcagaa
     1501 aacgtgaagg tgctaggagg ggaggtagat ggtcttgcag aagaatatgc ccaagagaaa
     1561 atacttgcaa gattaattgg agaacctgac cctacagttt cagtcattcc aaataattct
     1621 aatcccagcg cgcccagagt ttcaggggat ttagatgctg ctttggggcc ttcagacgaa
     1681 gaactcttgg caagccttga tgaaagtgaa gagcctgcag caagtgatga tgtgacggtg
     1741 gggagactca gcttcagcac aggcccttcc tcagatactg ccccaacaat tcagactggt
     1801 tttgagccgg gatgtaatat ttcttcaagg ccaaaggaga aactaccaaa ccagcctgtg
     1861 catttcactg atggagaatt tgatgacttt tccctggaag aggccttgct tttggaagaa
     1921 acggtccaga aagagaaaat ggaagcaaaa gcatcacagc cactgagttt gaaggagagc
     1981 gtgggtaaac gtgtggagga ggccttctca cctagacctg ggggtctgaa ccacacagcc
     2041 tcgactcata aacaaggaaa cagccacttc agtgagaaaa catctgaaca gatgatccat
     2101 gaagacacac tttttgactg ttcatctact agacaccatc gtaagagact cttagctcat
     2161 gattttacaa aagacagtaa gatttcagaa gtagatgatg tagcacaaca aaccaccaac
     2221 agttcagatg tacattgctt aagtaataaa atgttaaaca ggaagccgga cctatcagag
     2281 aagagttcac aacattctaa aggaaatggc caccctttcc agacttgttc ttcaagatca
     2341 tttgagaata atactaacct atctattggc atggacttac actgtccacc ctttatctat
     2401 ttgtctgttc taatggccag aaagccaaag gaagttacca ctgtgaaagt caaagcattt
     2461 attgtcactt taactggaaa tctctcaagt tccggtggct tttggtgtgt gactgcaaag
     2521 gtttctgatg gtactgcata tctagatgta gattttatag atgaaatact taccagtatg
     2581 atagggtatt cagtaccaga aatgaaacag ttaaaaaagg accctcttaa atataaaaaa
     2641 ttcctagaag ggttacaaaa atgccagcga gatctgatag atttgtgttg cctaatgact
     2701 gtttcatatg atccgtcttc gtgtaaaggc atggtactgg aattgcaaga tgttggtgtg
     2761 gaacacctcg agaacctaaa gaagcggttg aataaataat tgccagaata ctattggagc
     2821 acacttttaa aacaggcaaa tatttggaat caaatttgtt tgttctcaat tttggaattc
     2881 tgtaaaagaa aaagcttcag agcttaaaaa tggctgaggc agctcagtgg tggtttctgc
     2941 caggtgtggt gacctgagtt tgatctcctg gtcccttgag gcaaaaggag agacccagct
     3001 tcagcttcca gaatctgttg ttagtcctct acacaggtag cataggacac acacagttgg
     3061 taaatgatgt ttaaaaataa agatatttaa tcaaaaatgt a
//
