LOCUS       NM_001037200            2082 bp    mRNA    linear   ROD 22-SEP-2024
DEFINITION  Rattus norvegicus regulator of microtubule dynamics 2 (Rmdn2),
            transcript variant 1, mRNA.
ACCESSION   NM_001037200 XM_233818
VERSION     NM_001037200.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2082)
  AUTHORS   Zang,X., Wang,Z., Li,Y., Gao,H., Guo,J., Jin,W., Chang,C., Lin,J.,
            Zhu,K. and Xu,C.
  TITLE     Regulation of Hepatocytes in G0 and G1 Phases by NOTCH3 mRNA,
            miR-369-3p, and rno-Rmdn2_0006 during the Initial Stage of Rat
            Liver Regeneration
  JOURNAL   Genet Res (Camb) 2023, 8779758 (2023)
   PUBMED   37153858
  REMARK    GeneRIF: Regulation of Hepatocytes in G0 and G1 Phases by NOTCH3
            mRNA, miR-369-3p, and rno-Rmdn2_0006 during the Initial Stage of
            Rat Liver Regeneration.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2082)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Feb 8, 2022 this sequence version replaced NM_001037200.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC100261.1, SRR26643286.19044.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760400,
                                           SAMN12840130 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-364               JAXUCZ010000006.1  21193321-21193684   c
            365-838             JAXUCZ010000006.1  21184171-21184644   c
            839-1013            JAXUCZ010000006.1  21155315-21155489   c
            1014-1116           JAXUCZ010000006.1  21154547-21154649   c
            1117-1177           JAXUCZ010000006.1  21148675-21148735   c
            1178-1253           JAXUCZ010000006.1  21142256-21142331   c
            1254-1331           JAXUCZ010000006.1  21141130-21141207   c
            1332-1430           JAXUCZ010000006.1  21138410-21138508   c
            1431-1484           JAXUCZ010000006.1  21136634-21136687   c
            1485-1565           JAXUCZ010000006.1  21136456-21136536   c
            1566-2082           JAXUCZ010000006.1  21131181-21131697   c
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q12"
     gene            1..2082
                     /gene="Rmdn2"
                     /gene_synonym="Fam82a; Fam82a1"
                     /note="regulator of microtubule dynamics 2"
                     /db_xref="GeneID:313840"
                     /db_xref="RGD:1559836"
     exon            1..364
                     /gene="Rmdn2"
                     /gene_synonym="Fam82a; Fam82a1"
                     /inference="alignment:Splign:2.1.0"
     exon            365..838
                     /gene="Rmdn2"
                     /gene_synonym="Fam82a; Fam82a1"
                     /inference="alignment:Splign:2.1.0"
     CDS             381..1619
                     /gene="Rmdn2"
                     /gene_synonym="Fam82a; Fam82a1"
                     /note="RMD-2; family with sequence similarity 82, member
                     A; family with sequence similarity 82, member A1"
                     /codon_start=1
                     /product="regulator of microtubule dynamics protein 2"
                     /protein_id="NP_001032277.1"
                     /db_xref="GeneID:313840"
                     /db_xref="RGD:1559836"
                     /translation="MPHSTHKELLLGIMAGTAGISLLVLWYHKILKPRTTMIFPKFLS
                     LGKKSDSLTLQDESYSEQGTSVVFQRGQLQILEKLNELLTNVEELKEEIKFLKETIPK
                     LEECIQDELGVRVTVHQVSPQHRARKKKTTTTTVQRPATSNSSEEAESEGGYITANTD
                     TEEQSFPVPKALNTHIEDLKLDVLLQKVDHLRLNEAHKMESFELLCDHKEKFSEEIEF
                     LWRLVRAYGDMYDLSTNTQEKKHYANVGKTLGERAITRAPMNGHCHLWYALLCGYVSE
                     FEGLQNKINCGHLFKKHLDIAIQLLPEEPVLYYLKGRYCYTVSKLSWIEKKMAATLFG
                     EIPSSTVHEALHNFLKTEELQPGYSVSNYMYVAKCYVDLGESREAWKFCNLALLLPIV
                     TKEDKDAHKEVKKIIGSLKR"
     exon            839..1013
                     /gene="Rmdn2"
                     /gene_synonym="Fam82a; Fam82a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1014..1116
                     /gene="Rmdn2"
                     /gene_synonym="Fam82a; Fam82a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1117..1177
                     /gene="Rmdn2"
                     /gene_synonym="Fam82a; Fam82a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1178..1253
                     /gene="Rmdn2"
                     /gene_synonym="Fam82a; Fam82a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1254..1331
                     /gene="Rmdn2"
                     /gene_synonym="Fam82a; Fam82a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1332..1430
                     /gene="Rmdn2"
                     /gene_synonym="Fam82a; Fam82a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1431..1484
                     /gene="Rmdn2"
                     /gene_synonym="Fam82a; Fam82a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1485..1565
                     /gene="Rmdn2"
                     /gene_synonym="Fam82a; Fam82a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1566..2082
                     /gene="Rmdn2"
                     /gene_synonym="Fam82a; Fam82a1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caaccgctca ctagtcaaga cttaattgga aacaatcctc tgttcactta ctgcaagtac
       61 attttcactc acatatactg cctacgctac tttggctgat gaatcttcaa ctgtgtttga
      121 ttctggccaa aggatgatga actgacctcg acttgtcaag gacacccttc acaggatctc
      181 tcacaaggac gcccttcgac attatctctc tcattgaaag gatggagggg ctgagttact
      241 cttcttggga tttgtttaat tcccctttag agctctctga atccatgact aaaagactct
      301 tctgcaattt ctgaagaagc ttcgtggaat aacctaaaaa aactactgac agcctccggg
      361 taagaaataa aagccaagaa atgccccatt ccacgcacaa agaactgctc cttggcatca
      421 tggcgggaac tgctgggatc agcttgctgg tcctatggta ccacaagatc cttaagccca
      481 ggacaacaat gattttcccc aagtttcttt ctttgggtaa gaaatccgat tcactcactt
      541 tgcaagatga aagctatagt gaacaaggaa catcagtggt ctttcaaagg gggcagctcc
      601 agatcctgga gaagttaaac gagttactga ccaatgtgga ggaactgaag gaggagatca
      661 aattccttaa agagacgatt ccaaagctgg aggaatgtat acaagatgaa cttggagtga
      721 gggtaacagt tcatcaggtc agtcctcagc acagagctag aaaaaagaag acaacgacga
      781 cgacagtcca acgtccagct acaagcaata gttcagagga ggcagaaagt gaaggagggt
      841 atattacagc taacactgac acagaagaac agagtttccc ggtccctaag gctcttaaca
      901 cacacataga ggatctaaag ttggatgtcc tccttcagaa ggtagaccac ttacggctaa
      961 atgaggctca caaaatggag agtttcgagc tactttgtga ccacaaagag aagtttagtg
     1021 aagaaataga gtttctgtgg cggcttgtcc gtgcctatgg agacatgtat gacctatcta
     1081 caaacacgca ggaaaagaaa cactatgcta atgttggaaa aactttagga gagagagcta
     1141 ttaccagagc gcctatgaat ggacactgcc atctgtggta tgcacttttg tgtggttatg
     1201 tatctgagtt tgagggcttg caaaataaaa ttaactgtgg acatctattc aagaagcatc
     1261 tagatatagc catccagctt ttgcctgaag aacccgtttt atattacctc aagggaagat
     1321 attgttatac tgtctcaaaa ctcagctgga ttgagaaaaa aatggctgct actctatttg
     1381 gggaaatacc atcttcaaca gttcatgaag ctttgcataa cttccttaag actgaagaat
     1441 tgcaacctgg gtattctgtg tccaactata tgtatgtggc caagtgttat gttgatcttg
     1501 gggaatctcg ggaggcttgg aaattctgta acttggcatt gttattgcct atcgtcacca
     1561 aagaggacaa ggatgcacac aaggaagtga agaaaataat tggttctttg aagaggtaaa
     1621 taaagagctt attcttcagc aaattcaata cgtcttctag actttaacag attgtacttt
     1681 tataatgctt tctccttaat gtaaagatca tgtattctca tttgatttga aggtctagcc
     1741 ttgccttcta cagccactgc accatgagac aaatcatgtt ctctgaagac agtgcttact
     1801 ctaatgttag cgtataatga tctctggata cttcgtttta ttcatgtcaa taaactacag
     1861 ccttaagagt gtttgtgtaa ccaagactta aacctattta ataaaacgca ccctagtgaa
     1921 tgttaccatt gtttcaatag acttcataaa ataattaatt catgacgaga atgtaagcaa
     1981 tgggcacagt tgctagaaaa agaagaacga aagaagaaag cacaccaagt aatcagagaa
     2041 atgtaaatag aattacaata aaaatactgt tttactatca aa
//
