LOCUS       NM_001044226            1645 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus RBPJ interacting and tubulin associated 1
            (Rita1), mRNA.
ACCESSION   NM_001044226 XM_001079864 XM_213787
VERSION     NM_001044226.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1645)
  AUTHORS   Wacker,S.A., Alvarado,C., von Wichert,G., Knippschild,U.,
            Wiedenmann,J., Clauss,K., Nienhaus,G.U., Hameister,H., Baumann,B.,
            Borggrefe,T., Knochel,W. and Oswald,F.
  TITLE     RITA, a novel modulator of Notch signalling, acts via nuclear
            export of RBP-J
  JOURNAL   EMBO J 30 (1), 43-56 (2011)
   PUBMED   21102556
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC112384.1.
            
            On or before Aug 24, 2006 this sequence version replaced
            XM_213787.4, XM_001079864.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC112384.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132264
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q16"
     gene            1..1645
                     /gene="Rita1"
                     /gene_synonym="RGD1306772; Rita"
                     /note="RBPJ interacting and tubulin associated 1"
                     /db_xref="GeneID:288683"
                     /db_xref="RGD:1306772"
     exon            1..229
                     /gene="Rita1"
                     /gene_synonym="RGD1306772; Rita"
                     /inference="alignment:Splign:2.1.0"
     exon            230..352
                     /gene="Rita1"
                     /gene_synonym="RGD1306772; Rita"
                     /inference="alignment:Splign:2.1.0"
     exon            353..710
                     /gene="Rita1"
                     /gene_synonym="RGD1306772; Rita"
                     /inference="alignment:Splign:2.1.0"
     CDS             442..1218
                     /gene="Rita1"
                     /gene_synonym="RGD1306772; Rita"
                     /codon_start=1
                     /product="RBPJ-interacting and tubulin-associated protein
                     1"
                     /protein_id="NP_001037691.1"
                     /db_xref="GeneID:288683"
                     /db_xref="RGD:1306772"
                     /translation="MQALHLQHRNPRSYRVKARASYVDETLFGSPTGTRPTLPDFDPP
                     WVQNCNRSRGVSPGPPKVSLAKRDCESPSSRGSTPNLTPRKKNKYRLIGHTPSYCDES
                     LFGSRPQGTSKERSRTAVEDAAKLRTLFWTPPATPRGSHSPRPRETPLRAIHPTGPPR
                     TEPRVATGSQMVSRDGLDAPRSLGQRRSYSLTHLAVPSTGHPASTAPQTNGPWSPRPY
                     TSGATVQSPLVTRKVCSGSVSGPTTPQRGACPQKPKPPWK"
     exon            711..1631
                     /gene="Rita1"
                     /gene_synonym="RGD1306772; Rita"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctatgcgggc atttgtggcg aagattatgc ttgctggcca gaggtcccag taggaaaagc
       61 tcctagcatg aaattcccgg gacgcctgcg ctttccgctt tgtaagctgt ctggtgtgtg
      121 ctactccgct gtttggagcc tgagttgtaa ttggggaaaa tggatttaat ctgaaggacc
      181 ggttggcgag gactagaacg caccacgctt gcaaagcgct ttgcacaaga caggagtgcc
      241 tgcttagcct gcggcatgca caaagcacgg ggttcgaacc catgcacctc agacgccagg
      301 cggtcgtgca gttcttcgtg ggaagtagaa gcgggaggat ccggagttaa agggagccct
      361 ggaggctgaa tctggcaggc acagtaaatc cactgggcag cctgaagacc ccggtggagg
      421 tggaactggc ccagcgtcgg aatgcaggca ctccaccttc agcaccgcaa cccgcgcagc
      481 taccgggtca aggccagggc atcctatgtg gatgagaccc tgtttggcag cccaacagga
      541 acccggccaa ctctaccaga ctttgaccca ccctgggtgc agaattgtaa cagatctaga
      601 ggagtgagcc caggaccccc gaaggtctct ctggccaaga gagactgtga gtctccctcc
      661 tccaggggca gcaccccaaa tctcacacca aggaagaaaa acaaatacag gttgattggc
      721 cacaccccat cctactgtga tgagtcactg tttggctccc ggccacaggg caccagcaag
      781 gagaggtctc ggacagccgt ggaggatgcg gccaagctcc ggaccctttt ctggacccca
      841 ccagccaccc ctaggggcag ccactcacct cgccccaggg agaccccact tcgggccatt
      901 cacccaactg gacctcccag gacagagccc agagtggcca caggctccca gatggtgtcc
      961 cgggatgggc tggatgctcc ccgctctctg ggacagaggc gttcctattc actcacccac
     1021 ctagctgtcc ccagcacggg tcatccagct tccactgccc cccagaccaa tgggccttgg
     1081 agtccccggc cttacacatc aggggcgact gtccagagtc ccctagtcac tcgcaaggta
     1141 tgctcaggca gtgtttcggg gccaactacc cctcagcgag gggcctgccc ccaaaagcca
     1201 aagcctcctt ggaaatgaca ttcttaccag gtaagccttt ggctcaaagc caggactcaa
     1261 gctcaggtgt ggtcctctgg agacaatggt ccccagggcc tccaaatgct ggagaagcct
     1321 ccacggggct ccatggtaag gatgggccat attttcccta gtccccacaa gctcaggatg
     1381 tccccagcct tctctgcagg gtatttgggg tccttgagat agatgtctct gtagccatgt
     1441 gtcagcctcc cggcttctgc gttggtgcca agccccaccc ggttccctac aaagggttca
     1501 gtttccacag gggtctgaag gtcttaaggg gtcctgggct gtgtgtggac cccaggggtg
     1561 ggacccgggg agacattatt ttaatattca tgtatttatt ccacgtatta aatgtatttg
     1621 gatcgccaaa aaaaaaaaaa aaaaa
//
