LOCUS       NM_001398742             976 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus ripply transcriptional repressor 2 (Ripply2),
            mRNA.
ACCESSION   NM_001398742 XM_039082552
VERSION     NM_001398742.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 976)
  AUTHORS   Takahashi,J., Ohbayashi,A., Oginuma,M., Saito,D., Mochizuki,A.,
            Saga,Y. and Takada,S.
  TITLE     Analysis of Ripply1/2-deficient mouse embryos reveals a mechanism
            underlying the rostro-caudal patterning within a somite
  JOURNAL   Dev Biol 342 (2), 134-145 (2010)
   PUBMED   20346937
REFERENCE   2  (bases 1 to 976)
  AUTHORS   Chan,T., Kondow,A., Hosoya,A., Hitachi,K., Yukita,A.,
            Okabayashi,K., Nakamura,H., Ozawa,H., Kiyonari,H., Michiue,T.,
            Ito,Y. and Asashima,M.
  TITLE     Ripply2 is essential for precise somite formation during mouse
            early development
  JOURNAL   FEBS Lett 581 (14), 2691-2696 (2007)
   PUBMED   17531978
REFERENCE   3  (bases 1 to 976)
  AUTHORS   Kawamura,A., Koshida,S., Hijikata,H., Ohbayashi,A., Kondoh,H. and
            Takada,S.
  TITLE     Groucho-associated transcriptional repressor ripply1 is required
            for proper transition from the presomitic mesoderm to somites
  JOURNAL   Dev Cell 9 (6), 735-744 (2005)
   PUBMED   16326386
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            [WARNING] On Mar 13, 2025 this sequence was replaced by
            NM_001398742.2.
            
            On Dec 22, 2021 this sequence version replaced XM_039082552.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AI145486.1, BF545907.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760393, SAMEA5760433
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-631               JAXUCZ010000008.1  96854508-96855138
            632-696             JAXUCZ010000008.1  96855469-96855533
            697-976             JAXUCZ010000008.1  96858684-96858963
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q31"
     gene            1..976
                     /gene="Ripply2"
                     /gene_synonym="RGD1308746"
                     /note="ripply transcriptional repressor 2"
                     /db_xref="GeneID:363111"
                     /db_xref="RGD:1308746"
     exon            1..631
                     /gene="Ripply2"
                     /gene_synonym="RGD1308746"
                     /inference="alignment:Splign:2.1.0"
     CDS             230..853
                     /gene="Ripply2"
                     /gene_synonym="RGD1308746"
                     /note="ripply2 homolog"
                     /codon_start=1
                     /product="protein ripply2"
                     /protein_id="NP_001385671.1"
                     /db_xref="GeneID:363111"
                     /db_xref="RGD:1308746"
                     /translation="MDTTESAESAHSPARSPSRSRCPPPAQPGYLSAWIHPRAFSTLA
                     LCLPTTEPEDRLAPAQPRAPSTSALAPYPSPLPLPVPSALAKFELSRVARLTFFVRGL
                     RLLSCRSEGFWRPWVRTPGEKEELAEPRAAEVLPSGPGMIEASRKLLQYQHPVRLFWP
                     KSKCYDYLYQEAETLLKNFPIQATISFYEDSDSEDDVEGLACENQSN"
     exon            632..696
                     /gene="Ripply2"
                     /gene_synonym="RGD1308746"
                     /inference="alignment:Splign:2.1.0"
     exon            697..976
                     /gene="Ripply2"
                     /gene_synonym="RGD1308746"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgggcgcatg ctgtttttct cccaggccgt gtgtcagggg gctattaaca cttgctcctg
       61 cagccggtcc ctgggccatt tggaaggttg cacgcgttca caccggcgcg cggcccgcgg
      121 cgccttcacg cgctgccgtt ttgtttatgc ggagcgaggg cggctggggt gcgaaggtct
      181 gcaagggcta gataaagccg agctgcgacg ctgaagcggt cgtccggcca tggataccac
      241 ggagagcgcc gagagcgcgc acagcccagc acgttcgccc tcgcgcagcc gctgcccgcc
      301 gcccgcgcag cccgggtacc tatcagcctg gatccatccc cgcgcattct ccaccctcgc
      361 cctgtgcctg ccgaccacgg agcccgagga ccgcctggcc ccggctcagc cccgtgcacc
      421 ctctacctcc gccctcgccc cgtacccgtc gcccttgcct ttgcccgtgc ccagtgccct
      481 agctaagttc gagttgagtc gggtggctcg gctcacgttc tttgtgcgcg gcttgcgctt
      541 gctatcctgc aggtccgagg gcttctggag accgtgggtt agaactcctg gcgagaaaga
      601 ggagctggcg gaacctcgtg ctgcagaggt gttgcccagc ggcccgggaa tgattgaagc
      661 ttccaggaag cttttgcaat accaacaccc tgtcagacta ttctggccca agtccaagtg
      721 ttacgactac ttataccaag aagcagaaac tcttctgaaa aattttccaa ttcaagctac
      781 aatttcgttt tatgaagact ctgatagtga agatgacgta gaggggctgg cctgtgaaaa
      841 ccaatctaat tagttccttc tgttgacaat tgagctgggt agaatctgaa ttttgtacat
      901 aaatgtacca taacttttta aaactaattt atttgtatat acgttattaa taaaatattt
      961 tgtaataact atagta
//
