LOCUS       NM_153309               2015 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ribosomal oxygenase 2 (Riox2), mRNA.
ACCESSION   NM_153309
VERSION     NM_153309.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2015)
  AUTHORS   Okamoto,M., Van Stry,M., Chung,L., Koyanagi,M., Sun,X., Suzuki,Y.,
            Ohara,O., Kitamura,H., Hijikata,A., Kubo,M. and Bix,M.
  TITLE     Mina, an Il4 repressor, controls T helper type 2 bias
  JOURNAL   Nat Immunol 10 (8), 872-879 (2009)
   PUBMED   19561615
REFERENCE   2  (bases 1 to 2015)
  AUTHORS   Tsuneoka,M., Koda,Y., Soejima,M., Teye,K. and Kimura,H.
  TITLE     A novel myc target gene, mina53, that is involved in cell
            proliferation
  JOURNAL   J Biol Chem 277 (38), 35450-35459 (2002)
   PUBMED   12091391
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC087650.1.
            
            On Dec 26, 2004 this sequence version replaced NM_153309.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087650.1, SRR8487227.79474.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760476 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2015
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q12"
     gene            1..2015
                     /gene="Riox2"
                     /gene_synonym="Mina53"
                     /note="ribosomal oxygenase 2"
                     /db_xref="GeneID:266670"
                     /db_xref="RGD:708521"
     exon            1..18
                     /gene="Riox2"
                     /gene_synonym="Mina53"
                     /inference="alignment:Splign:2.1.0"
     exon            19..478
                     /gene="Riox2"
                     /gene_synonym="Mina53"
                     /inference="alignment:Splign:2.1.0"
     CDS             47..1444
                     /gene="Riox2"
                     /gene_synonym="Mina53"
                     /EC_number="1.14.11.79"
                     /note="Mina-53; histone lysine demethylase MINA;
                     bifunctional lysine-specific demethylase and
                     histidyl-hydroxylase MINA; MYC-induced nuclear antigen;
                     myc induced nuclear antigen"
                     /codon_start=1
                     /product="ribosomal oxygenase 2"
                     /protein_id="NP_695221.1"
                     /db_xref="GeneID:266670"
                     /db_xref="RGD:708521"
                     /translation="MPKKVKPTGDENEEESVPCKQVKEELPNTLSVLNFDSPSSFFES
                     LISPIKVETFFKEFWEQKPLLIQRDDPSLAAYYQSLFSLSDLRSLCSQGLYYGRDVNV
                     CRCIGGKKKVLNKDGKAQFLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGS
                     LVGSNVYMTPAGSQGLPPHYDDVEVFILQLEGRKRWRLYSPTVPLAREYSVEPEDRIG
                     TPTHDFLLKPGDLLYFPRGTIHQAETPSGLAHSIHLTISTYQNNSWGDYLLDSISGLV
                     FDIAKEDVALRTGMPRRMLMNVETPADVTRKLSGFLRTLADQLEGRKELLSSDMKKDF
                     VMHRLPPFCVGNGTESMNPGGKLPRLNSIVRLQFKDHIVLTVGPDQNQSDEAQQKVVY
                     IYHSLKNERQTHMMGKEVETEIYGLRFPLSYVDALKQIWCGSPVRVKDLKLGTDEEKE
                     NLAVSLWTECLVHVL"
     exon            479..598
                     /gene="Riox2"
                     /gene_synonym="Mina53"
                     /inference="alignment:Splign:2.1.0"
     exon            599..727
                     /gene="Riox2"
                     /gene_synonym="Mina53"
                     /inference="alignment:Splign:2.1.0"
     exon            728..831
                     /gene="Riox2"
                     /gene_synonym="Mina53"
                     /inference="alignment:Splign:2.1.0"
     exon            832..934
                     /gene="Riox2"
                     /gene_synonym="Mina53"
                     /inference="alignment:Splign:2.1.0"
     exon            935..1106
                     /gene="Riox2"
                     /gene_synonym="Mina53"
                     /inference="alignment:Splign:2.1.0"
     exon            1107..1195
                     /gene="Riox2"
                     /gene_synonym="Mina53"
                     /inference="alignment:Splign:2.1.0"
     exon            1196..1285
                     /gene="Riox2"
                     /gene_synonym="Mina53"
                     /inference="alignment:Splign:2.1.0"
     exon            1286..2011
                     /gene="Riox2"
                     /gene_synonym="Mina53"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgcaacaggc cgtacctggt ttgcatttcc tccctacttg tgaacaatgc caaagaaagt
       61 gaagcccaca ggggatgaga atgaagaaga gtctgttcct tgcaagcagg tgaaagagga
      121 gctacctaat acgctttctg tattaaactt tgacagcccc agtagtttct ttgaaagttt
      181 aatatcaccc atcaaagtag agacattttt caaggaattc tgggaacaga agccccttct
      241 cattcagaga gatgaccctt cgctggccgc atattaccag tctctgttca gcctctcaga
      301 tctgaggagt ctctgcagcc aagggctgta ctatggaaga gatgtcaatg tctgccggtg
      361 catcggtggg aagaagaagg ttttaaataa ggatggcaaa gcacagtttc ttcagctgag
      421 aaaagatttt gatcagaaga gggcaacaat tcagtttcat cagccacaga gatttaagga
      481 tgagctctgg aggatccagg aaaagctgga atgttacttt ggctccttag taggctcaaa
      541 tgtgtacatg actcccgcag gatctcaggg ccttcctcca cattacgacg atgttgaggt
      601 ttttatcctg cagctggagg gaaggaaacg ttggcgcctg tactccccaa ctgtgcccct
      661 ggcgcgtgag tacagtgtgg agcctgagga ccggattggc acaccaacac atgacttcct
      721 gctgaagcct ggcgatttgt tgtacttccc cagagggacc attcaccagg cagaaactcc
      781 ttcaggcctg gcccactcta ttcacctgac tattagcacc taccagaaca attcatgggg
      841 agattacctt ttggactcca tttcggggct tgtatttgac attgcaaagg aagatgtggc
      901 attaaggact ggaatgccca ggcggatgct catgaatgtg gaaaccccag ctgacgtaac
      961 aaggaagttg agtggctttc tgaggactct ggcagaccag ctcgagggca gaaaagaact
     1021 gctctcatca gatatgaaga aggacttcgt catgcacaga cttccccctt tctgtgtggg
     1081 aaatggaaca gagtcaatga acccaggtgg aaagttgcca aggttgaaca gcatagtaag
     1141 actgcagttt aaagaccaca ttgtcctcac agtagggccc gatcagaatc aatctgatga
     1201 agctcaacaa aaggtggttt acatctacca ttctctaaag aatgagagac agacgcacat
     1261 gatggggaaa gaggtggaaa cagagattta tggacttcgc tttcctttat cctatgtgga
     1321 cgctctgaag caaatctggt gcgggtcacc agttcgtgtt aaggacctga aacttggcac
     1381 agatgaagag aaggagaacc tggcagtgtc tctctggaca gagtgtctag tccacgtgct
     1441 ctagtgcctt atgcagagaa ctgttgtact ttcagtgagg ggaacttaat cccgagggca
     1501 cttggtgttc tgattagtgc tctgggtgga gctgtggttg gttacagaga agaggcagga
     1561 gaaagaagct ggttcatgtc ctcatggaca ggagagggaa aacaggaaat tattaggcat
     1621 cccaggctgt gataaaatga tactttggac aagtttattt aatccagtgt tgtagaaaag
     1681 gcacaactcc agtacatacg tcatatagaa ttatgtcatt aacctggctt ctttgtcttg
     1741 gttctttgga aaaaataact cctttaaaga gcatccttgg ctccaaaaat actttttaac
     1801 aattaaaact taggaataaa gttgtttttt ttttacaatg aaaatataca atctttgagc
     1861 ataaatgacc cctttcccca ttaaaataaa catgttttgt gtaatactgc cagcccataa
     1921 gaggtaccca gcatctgtgc atatttggag ctttcagacg ctgcttggaa gatgacagaa
     1981 gagccagccc aaaaaaaaaa aaaaaaaaaa aaaaa
//
