LOCUS       NM_001108040            2619 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ribosomal oxygenase 1 (Riox1), mRNA.
ACCESSION   NM_001108040 XM_001057487 XM_234396
VERSION     NM_001108040.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2619)
  AUTHORS   Sinha,K.M., Yasuda,H., Coombes,M.M., Dent,S.Y. and de
            Crombrugghe,B.
  TITLE     Regulation of the osteoblast-specific transcription factor Osterix
            by NO66, a Jumonji family histone demethylase
  JOURNAL   EMBO J 29 (1), 68-79 (2010)
   PUBMED   19927124
REFERENCE   2  (bases 1 to 2619)
  AUTHORS   Eilbracht,J., Reichenzeller,M., Hergt,M., Schnolzer,M., Heid,H.,
            Stohr,M., Franke,W.W. and Schmidt-Zachmann,M.S.
  TITLE     NO66, a highly conserved dual location protein in the nucleolus and
            in a special type of synchronously replicating chromatin
  JOURNAL   Mol Biol Cell 15 (4), 1816-1832 (2004)
   PUBMED   14742713
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473982.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_234396.2, XM_001057487.1.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2619
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q31"
     gene            1..2619
                     /gene="Riox1"
                     /gene_synonym="No66; RGD1307704"
                     /note="ribosomal oxygenase 1"
                     /db_xref="GeneID:314300"
                     /db_xref="RGD:1307704"
     exon            1..2619
                     /gene="Riox1"
                     /gene_synonym="No66; RGD1307704"
                     /inference="alignment:Splign:2.1.0"
     CDS             431..2224
                     /gene="Riox1"
                     /gene_synonym="No66; RGD1307704"
                     /EC_number="1.14.11.27"
                     /EC_number="1.14.11.79"
                     /note="nucleolar protein 66; myc-associated protein with
                     JmjC domain; lysine-specific demethylase NO66; histone
                     lysine demethylase NO66; bifunctional lysine-specific
                     demethylase and histidyl-hydroxylase NO66"
                     /codon_start=1
                     /product="ribosomal oxygenase 1"
                     /protein_id="NP_001101510.1"
                     /db_xref="GeneID:314300"
                     /db_xref="RGD:1307704"
                     /translation="MDELPNGNGAAPLKRGRGRRRRQPQPRGASVLALPLRPRKVRRH
                     RKSAASRVAALRARALLSEDSDSNVESVRGKRERPAELPEASRSAEPRPVPVRPRPAS
                     ATLPRRVEGRAALSRNLGKPAPLPGSHVDDPERPWDSPLQQVLAELNGIPSSRRRAAR
                     LFEWLLAPLPPDHFYRRLWEREAVLVRRQDHSYYEGLFSTSDLDWMLRYEDVHFGQHL
                     DAARYIDGRRETLNPPGRALPAAAWSLYQAGCSLRLLCPQAFSPTVWQFLAVLQEQFG
                     SMAGSNVYLTPPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRDPSEELALTSSPNFS
                     QEDLGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSLHLTLSTYQRNTWGDFLEAVL
                     PLAMQAAIEENVEFRRGLPRDFMDYMGAQHSDSKDPRRTAFMEKVRVLVARLGHFAPV
                     DAVADQRAKDFIHDSLPPVLTDRERALSVHGLPIRWEAGEPVNVGAQLTTETQVHMLQ
                     DGIARLVGEGGRLFLYYTVENSRVYHLEEPKCLEIYPQQADAMELLLRSYPEFVRVGD
                     LPCDSVEDQLSLATMLYDKGLLLTKTPLVLS"
ORIGIN      
        1 tggcgctgca cacagaggag ctctgctcgg ccaagaccgg aggatttcta tgcgttcaaa
       61 gccagcctag cctacctagc aagttctagg actacgtagc tagggcttct gtagagagat
      121 ctgcccgcct gcccccgccc ccggcgccct cccccgcccc ccgcaaaaaa aaaaaaaaaa
      181 aaaaaagagg aatgaagttg ttttcttctg aaatgcctcg taccttgttt tcttgcacgg
      241 aatctttatc tggtaaggat ttttgccttt ccagtgtata ctgccgcagt tttaaaaagg
      301 tgacaaaccg gctagctgta ggacccagga ggacgttagg cttaatctac ctaggaaatg
      361 ctggaggact cgcccccttc ccagaaagca ccgcggccgc ggaagcgtgg gtcttgtcag
      421 ccgccaggcc atggatgagc ttccgaatgg caacggcgcg gcgccgctga agcgtggacg
      481 cgggaggcgc cggcgccagc cgcagccccg cggcgcgtcg gtcttggccc tgcccttacg
      541 gccacggaag gtccgaaggc accggaaaag tgcggcgtcc cgcgtggccg cgctgagagc
      601 tcgcgcgctc ctgagcgaag actcggactc gaacgtggaa tcggtccggg gcaagcggga
      661 gaggcctgca gagctaccgg aggcctcgcg gtcggccgaa ccgcggccgg tgccagtgcg
      721 tccgagaccg gcttcggcga ctctgccgcg ccgcgtggag gggcgggccg cgctctcccg
      781 aaacctgggg aagcccgctc cgttgccggg ctcgcacgtg gatgacccgg aacggccctg
      841 ggattcgccg ctgcagcagg tgttggcgga gctgaacggc atccccagca gccggaggcg
      901 cgccgcccgc ctcttcgagt ggctcctggc gcccctgcct ccggaccact tctaccggcg
      961 gctgtgggag cgggaggcgg tgctggtgcg gcggcaggac cacagctact acgaaggtct
     1021 attctctacc tccgacctgg actggatgct gcgctacgag gacgtgcact tcgggcagca
     1081 cctggatgct gcgcgctaca tcgatgggcg gcgggaaacc ttgaacccac cgggccgggc
     1141 acttcccgct gccgcgtggt ccttgtacca agccggctgc tccttacgcc ttctttgccc
     1201 gcaagctttc tcgcccacgg tgtggcagtt tttggctgtg cttcaggaac agtttggaag
     1261 catggcaggc tccaacgttt acctcacgcc ccccaactcg cagggcttcg ctccccacta
     1321 cgacgacatc gaggctttcg tgttacagct ggaaggtcgg aaactctggc gagtctaccg
     1381 accgcgggac cccagtgaag agttggcact gacatctagt cccaacttca gccaggagga
     1441 ccttggtgag ccggtactcc aaacggtact ggaacccgga gacctgctct attttcctcg
     1501 gggcttcatt catcaagctg aatgtcagga tggagtccat tctctgcacc tcaccttgtc
     1561 tacctaccag cgcaacacct ggggcgactt cctggaggct gttctgcctc tggcaatgca
     1621 ggcagcaata gaggaaaatg tggaatttcg caggggtctg cctcgagact tcatggatta
     1681 tatgggggcc cagcattcag actctaagga tcccagaagg acagctttca tggaaaaagt
     1741 gcgggtcttg gttgctcgcc tgggacactt tgctcctgtc gatgctgtgg ctgaccagag
     1801 agcaaaagac ttcattcacg attccctgcc ccctgtgttg acggataggg aaagggctct
     1861 aagtgtgcac gggctcccga ttcgctggga ggctggagaa cctgtaaatg tgggggccca
     1921 gctgacaaca gaaacccaag tccatatgct tcaggatggc atagctcggc tggtgggtga
     1981 ggggggccgc ttgttcctgt attacacagt ggaaaactct cgagtgtatc atctggagga
     2041 acccaagtgc ttagaaatct acccccagca agccgatgcc atggaactct tgctgcgctc
     2101 ctacccagag tttgtgagag taggggattt gccctgtgac agtgtggaag accagctttc
     2161 cttggcgacc atgttatatg ataaggggct gctgctcact aaaacgcccc tagttctgag
     2221 ttagtttctt gaggatggcc ggaaagaatg cggttgtgat tctccgctac caccgccacc
     2281 ttgtctcctt ttttaaaaga ggtcatgttc ttaccttgct aagcatcact atggttacat
     2341 ttacctttat gattttttca gtgtcgagaa cctcaggcct gagaagagcc tcttcaccta
     2401 ggtacaaaag taaacacaga aattgaagca gggggaaaag ctgttttgca gaagtagccc
     2461 tgatccccct cctttcagag caccacttca ttccctgcac tgtcctgggt attgggtagc
     2521 attggccggg ccgttccatg tgagacagtg ggggggttta tatgaaagtt ccttcctcga
     2581 gttaagtttg tatgaacact agatttatta aaaagttcc
//
