LOCUS       NM_001004205            1317 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus Rab interacting lysosomal protein-like 2
            (Rilpl2), mRNA.
ACCESSION   NM_001004205 XM_213771
VERSION     NM_001004205.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1317)
  AUTHORS   Schaub,J.R. and Stearns,T.
  TITLE     The Rilp-like proteins Rilpl1 and Rilpl2 regulate ciliary membrane
            content
  JOURNAL   Mol Biol Cell 24 (4), 453-464 (2013)
   PUBMED   23264467
REFERENCE   2  (bases 1 to 1317)
  AUTHORS   Lise,M.F., Srivastava,D.P., Arstikaitis,P., Lett,R.L., Sheta,R.,
            Viswanathan,V., Penzes,P., O'Connor,T.P. and El-Husseini,A.
  TITLE     Myosin-Va-interacting protein, RILPL2, controls cell shape and
            neuronal morphogenesis via Rac signaling
  JOURNAL   J Cell Sci 122 (Pt 20), 3810-3821 (2009)
   PUBMED   19812310
  REMARK    GeneRIF: These data represent a novel mechanism linking RILPL2, the
            motor protein MyoVa and Rac1 with neuronal structure and function.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079132.1.
            
            On Sep 10, 2004 this sequence version replaced XM_213771.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079132.1, EV777183.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q15"
     gene            1..1317
                     /gene="Rilpl2"
                     /note="Rab interacting lysosomal protein-like 2"
                     /db_xref="GeneID:288652"
                     /db_xref="RGD:1303140"
     exon            1..578
                     /gene="Rilpl2"
                     /inference="alignment:Splign:2.1.0"
     CDS             273..866
                     /gene="Rilpl2"
                     /note="rab-interacting lysosomal-like protein 2"
                     /codon_start=1
                     /product="RILP-like protein 2"
                     /protein_id="NP_001004205.1"
                     /db_xref="GeneID:288652"
                     /db_xref="RGD:1303140"
                     /translation="MEEPPVREEEDGEEDEGALAKSPLQLTTEDVYDISYVVGRELMA
                     LGSDPRVTRLQFKIVRVMEMLEALVNEGSLAVEELRMERDNLKQEVEGLRRAGVSGSE
                     VNLGPDKMVVDLTDPNRPRFTLQELRDVLQERNKLKSQLLLVQEELQCYRSGLLPPRE
                     TPGGRREKDAMVTMGNGEKEERTIMKKLFSFRSGKHT"
     exon            579..730
                     /gene="Rilpl2"
                     /inference="alignment:Splign:2.1.0"
     exon            731..835
                     /gene="Rilpl2"
                     /inference="alignment:Splign:2.1.0"
     exon            836..1289
                     /gene="Rilpl2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggactacca ggccttgggt gctcctcggt gccccttcct ctctgctttg cttcccacag
       61 tcccctgtgc gtgtccctca cttttggcgc acggctgtgt agctgcgcgc ggctttccat
      121 ggttcggtgg tacccgctac tcagcgccac cccccaaggg ccacacagac tgctcacggc
      181 gtggactcgg cccagagaaa agtttccctg acccagagcc cgtggacgcg taggtgacag
      241 cagccctgaa ggtcgcagaa gtccggggta ccatggagga gcccccagta cgggaagagg
      301 aggacggcga ggaagacgag ggcgccctgg ccaagagccc cctgcagctg accaccgaag
      361 acgtgtacga catctcctat gtggtgggcc gcgagctgat ggccctgggc agcgaccccc
      421 gcgtcacccg gctgcagttc aagatcgtac gtgtgatgga gatgctggag gcgctggtga
      481 atgagggcag cctggcggtc gaggagctga ggatggagag ggacaacctc aagcaggagg
      541 tggaggggct gcggagagcc ggtgtgtccg gatccgaggt gaacttggga ccggacaaga
      601 tggtagttga tctgacagac cccaaccggc cccgctttac cctgcaagag ctgagggacg
      661 ttctgcagga acgcaacaag ctcaagtcgc agctgctgct ggtgcaggag gaactgcagt
      721 gctacaggag tggtctcctt ccacccagag aaactccagg aggaagaaga gagaaagacg
      781 ctatggttac catgggcaac ggcgagaagg aggagaggac cattatgaag aagctgttct
      841 ctttccggtc agggaagcac acctagattg aaggccattg ccaagatggc gaccctctcg
      901 acttgagaag ataattgcca atatgtcttc tggaaccatc tttctgtgct ttggagcttt
      961 gccctcagag caaagtcaaa ggaagatgct ctcatggctc acctgctccc cggggacaga
     1021 actggatagg cagtaagctt tggccaggac aagtgaggca tgatcaggaa cttgagaaag
     1081 caaaggaaca ctgagcgtgg cctccactca tggacagagg cctctggccc gcagattgtt
     1141 cctgcctcag cggtaatccg gtcagagcaa gatggaaaag taggaaagta tggaatcgct
     1201 tttactgata tttggtgaat acttgatttc tctcactcaa ctttctttat atgacttttg
     1261 tattaaaatg aaaagacctt tagagtttca aaaaaaaaaa aaaaaaaaaa aaaaaaa
//
