LOCUS       NM_001191665            2030 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus Rab interacting lysosomal protein-like 1
            (Rilpl1), mRNA.
ACCESSION   NM_001191665 XM_222150
VERSION     NM_001191665.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Schaub,J.R. and Stearns,T.
  TITLE     The Rilp-like proteins Rilpl1 and Rilpl2 regulate ciliary membrane
            content
  JOURNAL   Mol Biol Cell 24 (4), 453-464 (2013)
   PUBMED   23264467
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Sen,N., Hara,M.R., Ahmad,A.S., Cascio,M.B., Kamiya,A., Ehmsen,J.T.,
            Agrawal,N., Hester,L., Dore,S., Snyder,S.H. and Sawa,A.
  TITLE     GOSPEL: a neuroprotective protein that binds to GAPDH upon
            S-nitrosylation
  JOURNAL   Neuron 63 (1), 81-91 (2009)
   PUBMED   19607794
  REMARK    Erratum:[Neuron. 2009 Sep 10;63(5):709. Aggrawal, Nishant
            [corrected to Agrawal, Nishant]]
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On Jul 17, 2010 this sequence version replaced XM_222150.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643296.30863.1,
                                           SRR26643298.80550.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-514               JAXUCZ010000012.1  37732847-37733360
            515-665             JAXUCZ010000012.1  37742978-37743128
            666-784             JAXUCZ010000012.1  37748859-37748977
            785-1009            JAXUCZ010000012.1  37749468-37749692
            1010-1188           JAXUCZ010000012.1  37760236-37760414
            1189-1281           JAXUCZ010000012.1  37761903-37761995
            1282-2030           JAXUCZ010000012.1  37769911-37770659
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q15"
     gene            1..2030
                     /gene="Rilpl1"
                     /gene_synonym="GOSPEL; RGD1307973"
                     /note="Rab interacting lysosomal protein-like 1"
                     /db_xref="GeneID:304469"
                     /db_xref="RGD:1307973"
     exon            1..514
                     /gene="Rilpl1"
                     /gene_synonym="GOSPEL; RGD1307973"
                     /inference="alignment:Splign:2.1.0"
     CDS             206..1426
                     /gene="Rilpl1"
                     /gene_synonym="GOSPEL; RGD1307973"
                     /note="rab-interacting lysosomal-like protein 1; GAPDH's
                     competitor of SIAH1 protein enhances life"
                     /codon_start=1
                     /product="RILP-like protein 1"
                     /protein_id="NP_001178594.1"
                     /db_xref="GeneID:304469"
                     /db_xref="RGD:1307973"
                     /translation="MEEPLGSPPAALSALEKNVAELTVMDVYDIASLVGHEFERVIDQ
                     HGCEAIARLMPKVVRVLEILEVLVSRHHVAPELDELRLELDRLRVERMDRIEKERKHQ
                     KELELVEDVWRGEAQDLLSQIAQLQEENKQLMTNLNHKDVGFSEEELQKHEGMSERER
                     QVMKRLKEVVDKQRDEIRAKDRELVLKNEDVEALQQQQTRLMKINHDLRHRVTVVEAQ
                     GKALIEQKVELEADLQTKEQEMGSLRAELGKLRERLQGEHSQNGEEEEAEIPPQPDGE
                     ESISDAEKAALDLKDPNRPRFTLQELRDVLHERNELKSKVFLLQEELAYYKSEEIEEE
                     NRIPQPPPITHPRTSPQPESGIKRLFSFFSRDKRRLANTQRPTHIHESFGQWAITHRD
                     DGYTEQGQEALQHL"
     exon            515..665
                     /gene="Rilpl1"
                     /gene_synonym="GOSPEL; RGD1307973"
                     /inference="alignment:Splign:2.1.0"
     exon            666..784
                     /gene="Rilpl1"
                     /gene_synonym="GOSPEL; RGD1307973"
                     /inference="alignment:Splign:2.1.0"
     exon            785..1009
                     /gene="Rilpl1"
                     /gene_synonym="GOSPEL; RGD1307973"
                     /inference="alignment:Splign:2.1.0"
     exon            1010..1188
                     /gene="Rilpl1"
                     /gene_synonym="GOSPEL; RGD1307973"
                     /inference="alignment:Splign:2.1.0"
     exon            1189..1281
                     /gene="Rilpl1"
                     /gene_synonym="GOSPEL; RGD1307973"
                     /inference="alignment:Splign:2.1.0"
     exon            1282..2030
                     /gene="Rilpl1"
                     /gene_synonym="GOSPEL; RGD1307973"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtctctccgg acaccgggcg ccaccgcctc ccaggccggg acccaagtct ccatcgctcg
       61 gagtcggagc ctcgagtcgg gagacgctgc gggcctgcgc acgcgccgcc gccctcgccc
      121 tcctccccgc ggtgctccag gccccccgcc ccccaagttc acgagttacc ggagtggacg
      181 gacggcccgg agcccgagcg gggccatgga ggagccgcta gggtcgccgc ccgccgccct
      241 gtcggctctg gagaagaacg tggcggagct gaccgtcatg gacgtgtacg atatcgcgtc
      301 gctcgtgggc cacgagttcg agagggtcat cgaccaacac ggctgcgagg ccattgcacg
      361 cctcatgccc aaggtcgtga gggtcctgga gatcctcgag gtgctggtta gccgacacca
      421 cgtcgctccc gagctggacg agctgcgcct ggaactggac cggttgcgcg tagagaggat
      481 ggaccgcatt gaaaaggagc gcaagcatca aaaggagttg gagttggtgg aggatgtgtg
      541 gcggggggag gcacaggacc tcctgtccca gattgcccag ctgcaggagg agaataagca
      601 gctgatgacc aacctcaacc acaaggacgt gggcttctcc gaggaggagt tacagaagca
      661 cgaaggcatg tcagagcgag agcggcaggt gatgaagagg ctgaaggagg tggtggacaa
      721 gcagagggat gagatccgag ccaaagacag ggagctggtc ctgaagaatg aggacgtcga
      781 ggctctgcag cagcagcaga cgaggctaat gaagatcaac cacgaccttc ggcacagggt
      841 caccgtggtg gaggcccagg ggaaggctct gattgagcag aaggtggaac ttgaggcaga
      901 tctgcagacc aaggagcagg agatgggcag cctgcgggca gaactcggga agcttcggga
      961 gaggctgcag ggcgaacaca gccagaatgg ggaggaagag gaggctgaga tcccaccaca
     1021 gccagatggt gaggagtcca tttcagacgc agagaaggcc gccctggacc tcaaggaccc
     1081 caaccgccct cggttcacgc tgcaggagct gcgggatgtg ctgcatgaga ggaatgagct
     1141 taagtccaag gtgtttctgc tgcaagagga gctggcctac tataagagcg aagaaataga
     1201 agaggagaat cgaatacccc aacctccgcc catcacacac ccgaggacgt ccccccagcc
     1261 cgagtctggg atcaagcgac tgtttagctt tttctcccgg gacaagaggc gcctggccaa
     1321 cacacagaga cccacacaca tccacgagtc ctttggccag tgggcgatta cccaccgaga
     1381 tgacgggtac acggagcaag gacaggaagc cctgcagcac ctgtgactgg acctcctcct
     1441 ggacctcctg ccacccgctc caggtggcct cgacatcaac tcctcaaacg aactgtctgc
     1501 tttgaggatg gatgatgaga aactgacgcc aaattctgaa gtgtttattt atctgcaggg
     1561 ctccccagtt tatactcaat gcctctgacc ccttaggacc tatatttaat aagatgagga
     1621 tatgaaacca gaccacatta attttagtta gtgagcttcc taacctgaac gcatcaccac
     1681 tatcatagct atttgactct cctaggtttc gtttttttat ggccttggtc ggtgaggagc
     1741 agtggcaagg ggtgagtttt atattacgaa gttgccctgg aggtagcagg ctgtacagaa
     1801 agtgtgaatc ggacaggtgg agcctctaat cataggacgg gctacccagt ttggctggga
     1861 cccaacagaa gatcatgcag tccttctagc cactgtctag gagcaacctt gagatcgtca
     1921 ctctgtccct gataagagct agaggcccaa gcagcctgtc cgagatggtg tgccttggaa
     1981 tctgctgtga gcttcacagt actaaccaaa caaagttgtt taggatgaga
//
