LOCUS       NM_031714                914 bp    mRNA    linear   ROD 08-APR-2024
DEFINITION  Rattus norvegicus reactive intermediate imine deaminase A homolog
            (Rida), mRNA.
ACCESSION   NM_031714
VERSION     NM_031714.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 914)
  AUTHORS   Park,O.H., Ha,H., Lee,Y., Boo,S.H., Kwon,D.H., Song,H.K. and
            Kim,Y.K.
  TITLE     Endoribonucleolytic Cleavage of m6A-Containing RNAs by RNase P/MRP
            Complex
  JOURNAL   Mol Cell 74 (3), 494-507 (2019)
   PUBMED   30930054
REFERENCE   2  (bases 1 to 914)
  AUTHORS   Wang,H., Wu,G., Park,H.J., Jiang,P.P., Sit,W.H., van Griensven,L.J.
            and Wan,J.M.
  TITLE     Protective effect of Phellinus linteus polysaccharide extracts
            against thioacetamide-induced liver fibrosis in rats: a proteomics
            analysis
  JOURNAL   Chin Med 7 (1), 23 (2012)
   PUBMED   23075396
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 914)
  AUTHORS   Dhawan,L., Liu,B., Pytlak,A., Kulshrestha,S., Blaxall,B.C. and
            Taubman,M.B.
  TITLE     Y-box binding protein 1 and RNase UK114 mediate monocyte
            chemoattractant protein 1 mRNA stability in vascular smooth muscle
            cells
  JOURNAL   Mol Cell Biol 32 (18), 3768-3775 (2012)
   PUBMED   22801372
  REMARK    GeneRIF: These studies define new roles for glucocorticoid
            receptor, Y-box binding protein 1, and RNase UK114 in the formation
            of a molecular complex that degrades MCP-1 mRNA.
REFERENCE   4  (bases 1 to 914)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   5  (bases 1 to 914)
  AUTHORS   Lambrecht,J.A., Flynn,J.M. and Downs,D.M.
  TITLE     Conserved YjgF protein family deaminates reactive enamine/imine
            intermediates of pyridoxal 5'-phosphate (PLP)-dependent enzyme
            reactions
  JOURNAL   J Biol Chem 287 (5), 3454-3461 (2012)
   PUBMED   22094463
REFERENCE   6  (bases 1 to 914)
  AUTHORS   Asagi,K., Oka,T., Arao,K., Suzuki,I., Thakur,M.K., Izumi,K. and
            Natori,Y.
  TITLE     Purification, characterization and differentiation-dependent
            expression of a perchloric acid soluble protein from rat kidney
  JOURNAL   Nephron 79 (1), 80-90 (1998)
   PUBMED   9609467
REFERENCE   7  (bases 1 to 914)
  AUTHORS   Schmiedeknecht,G., Kerkhoff,C., Orso,E., Stohr,J., Aslanidis,C.,
            Nagy,G.M., Knuechel,R. and Schmitz,G.
  TITLE     Isolation and characterization of a 14.5-kDa
            trichloroacetic-acid-soluble translational inhibitor protein from
            human monocytes that is upregulated upon cellular differentiation
  JOURNAL   Eur J Biochem 242 (2), 339-351 (1996)
   PUBMED   8973653
REFERENCE   8  (bases 1 to 914)
  AUTHORS   Oka,T., Tsuji,H., Noda,C., Sakai,K., Hong,Y.M., Suzuki,I., Munoz,S.
            and Natori,Y.
  TITLE     Isolation and characterization of a novel perchloric acid-soluble
            protein inhibiting cell-free protein synthesis
  JOURNAL   J Biol Chem 270 (50), 30060-30067 (1995)
   PUBMED   8530410
REFERENCE   9  (bases 1 to 914)
  AUTHORS   Levy-Favatier,F., Cuisset,L., Nedelec,B., Tichonicky,L., Kruh,J.
            and Delpech,M.
  TITLE     Characterization, purification and cDNA cloning of a rat
            perchloric-acid-soluble 23-kDa protein present only in liver and
            kidney
  JOURNAL   Eur J Biochem 212 (3), 665-673 (1993)
   PUBMED   8385007
REFERENCE   10 (bases 1 to 914)
  AUTHORS   Critz,S.D., Wible,B.A., Lopez,H.S. and Brown,A.M.
  TITLE     Stable expression and regulation of a rat brain K+ channel
  JOURNAL   J Neurochem 60 (3), 1175-1178 (1993)
   PUBMED   8436968
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Nov 24, 2020 this sequence version replaced NM_031714.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ231669.1, X70825.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840108, SAMN12840115
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-136               JAXUCZ010000007.1  67590276-67590411   c
            137-242             JAXUCZ010000007.1  67581109-67581214   c
            243-297             JAXUCZ010000007.1  67580272-67580326   c
            298-366             JAXUCZ010000007.1  67579433-67579501   c
            367-422             JAXUCZ010000007.1  67578146-67578201   c
            423-914             JAXUCZ010000007.1  67576586-67577077   c
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q22"
     gene            1..914
                     /gene="Rida"
                     /gene_synonym="Hrsp12; L-PSP; Psp; PSP1; rp14.5"
                     /note="reactive intermediate imine deaminase A homolog"
                     /db_xref="GeneID:65151"
                     /db_xref="RGD:70940"
     exon            1..136
                     /gene="Rida"
                     /gene_synonym="Hrsp12; L-PSP; Psp; PSP1; rp14.5"
                     /inference="alignment:Splign:2.1.0"
     CDS             72..485
                     /gene="Rida"
                     /gene_synonym="Hrsp12; L-PSP; Psp; PSP1; rp14.5"
                     /EC_number="3.5.99.10"
                     /note="perchloric acid-soluble protein; ribonuclease
                     UK114; perchrolic acid soluble protein; heat-responsive
                     protein 12; 14.5 kDa translational inhibitor protein;
                     UK114 antigen homolog; liver perchloric acid-soluble
                     protein; translation inhibitor L-PSP ribonuclease"
                     /codon_start=1
                     /product="2-iminobutanoate/2-iminopropanoate deaminase"
                     /protein_id="NP_113902.2"
                     /db_xref="GeneID:65151"
                     /db_xref="RGD:70940"
                     /translation="MSSIIRKVISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDPSSG
                     QLVPGGVAEEAKQALKNLGEILKAAGCDFTNVVKTTVLLADINDFGTVNEIYKTYFQG
                     NLPARAAYQVAALPKGSRIEIEAIAVQGPFTTAGL"
     exon            137..242
                     /gene="Rida"
                     /gene_synonym="Hrsp12; L-PSP; Psp; PSP1; rp14.5"
                     /inference="alignment:Splign:2.1.0"
     exon            243..297
                     /gene="Rida"
                     /gene_synonym="Hrsp12; L-PSP; Psp; PSP1; rp14.5"
                     /inference="alignment:Splign:2.1.0"
     exon            298..366
                     /gene="Rida"
                     /gene_synonym="Hrsp12; L-PSP; Psp; PSP1; rp14.5"
                     /inference="alignment:Splign:2.1.0"
     exon            367..422
                     /gene="Rida"
                     /gene_synonym="Hrsp12; L-PSP; Psp; PSP1; rp14.5"
                     /inference="alignment:Splign:2.1.0"
     exon            423..914
                     /gene="Rida"
                     /gene_synonym="Hrsp12; L-PSP; Psp; PSP1; rp14.5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cagtgacaaa aagagtggat gttgttactg ccgtttcttc tctggaggat cttcaagagg
       61 gaaggattag catgtcgtca ataatcagaa aagtgatcag cacttcaaaa gccccggcgg
      121 ccattggtgc ctacagccaa gctgtgctag tggacaggac catttacgtt tctggacaga
      181 taggcatgga tccttccagt ggacaacttg tgccaggagg ggtagcagaa gaagctaaac
      241 aagctcttaa aaacctgggt gagattctga aggctgcagg ctgtgacttc actaatgtgg
      301 tgaagacaac tgttttactg gctgacataa atgactttgg cactgtcaat gagatctaca
      361 aaacatattt ccagggtaac cttcctgcca gggctgctta ccaagtcgcc gctttaccca
      421 aaggaagtcg aattgaaatc gaagccatcg ctgtccaggg gcctttcacc acagcaggac
      481 tgtaaggagc catgctgatg ctgactctgg agtctttaca atgtctctca cactttaaat
      541 tttacaaatg attctgggaa gtgcacacat gaccgtgtga agtgatcgtg gaaatgatca
      601 tacatgtgga gatttgacat taattgggga ttattcagta cagtggctag tgctgtaatt
      661 tcacttatgt ggctgggtgt gagagaaagg cacatagctg ctaacatgca gagcagaatc
      721 aaagacgaaa cagtaaagag cacacctaat taaatcatat caatttgctt gtgtggaata
      781 cttagttctc atgttagata tcagaaacta aattaaaata ttcaaacttt aatagtacca
      841 ggagaaaaaa gtggaccaaa atcttataag ataatactgc cttaatggaa taaaaaacag
      901 atgtgtaact ttcc
//
