LOCUS       NM_001024873             864 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus Rhox homeobox family member 11 (Rhox11), mRNA.
ACCESSION   NM_001024873 XM_233320
VERSION     NM_001024873.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 864)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On Sep 1, 2022 this sequence version replaced NM_001024873.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DQ058658.1, SRR26360181.2658127.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-568               JAXUCZ010000021.1  121737305-121737872
            569-614             JAXUCZ010000021.1  121742102-121742147
            615-864             JAXUCZ010000021.1  121745523-121745772
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq35"
     gene            1..864
                     /gene="Rhox11"
                     /note="Rhox homeobox family member 11"
                     /db_xref="GeneID:298346"
                     /db_xref="RGD:1564332"
     exon            1..568
                     /gene="Rhox11"
                     /inference="alignment:Splign:2.1.0"
     CDS             192..839
                     /gene="Rhox11"
                     /note="reproductive homeobox on X chromosome 11;
                     reproductive homeobox 11"
                     /codon_start=1
                     /product="Rhox homeobox family member 11"
                     /protein_id="NP_001020044.1"
                     /db_xref="GeneID:298346"
                     /db_xref="RGD:1564332"
                     /translation="MARKYFYFDYDYYGVSFYEEEITTEPQERVAYTANKGGFTDEVT
                     DLLKELLYQGGRSTIVEHSYRGCDMSNIQDTEHEPEETRNADETSEQLLFRIPRKPYK
                     FTPGQLWEMQAVFEETQYPDAFRRKELAELMNVDEQKVKDWFNNKRAKLRKIQREILK
                     GKIITPTQDELRMKTLVESKNVIIFQEQVGDGLFWDHQNFDTRAVQDSPISLLFL"
     exon            569..614
                     /gene="Rhox11"
                     /inference="alignment:Splign:2.1.0"
     exon            615..864
                     /gene="Rhox11"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctcacccagg tttgtaagtt gaaaatcaat agcttcggtg gagggggaca cgtgtccgtg
       61 tcagagagga acgtgtgccg cctagggtca caattttagt ctggagaacc cggacagctc
      121 ctcagagggc ttcaaggagc agagcctctc tctagaagcc acaagggtgc gccttctgag
      181 gagcacaggt catggcccgt aagtacttct acttcgacta cgactactat ggggtgagct
      241 tctatgagga agaaatcact actgaacccc aggaaagggt ggcctacaca gcaaacaagg
      301 gcggctttac cgacgaagta acagacctcc tgaaagagct gttatatcag ggcggtcgga
      361 gcactatagt cgaacatagt taccgaggtt gtgacatgag taacattcag gacactgagc
      421 acgaaccaga ggagaccagg aacgcggatg agaccagtga gcagttatta ttcaggattc
      481 ctcggaaacc atacaaattc acgcctggac agctgtggga aatgcaggca gtgttcgaag
      541 aaactcagta cccagatgcc ttcagacgaa aagagctggc agagctcatg aatgtggatg
      601 aacagaaagt aaaggattgg ttcaacaata agagagctaa acttaggaag attcagaggg
      661 aaatactaaa gggaaagata atcactccta cccaggacga acttcgcatg aagactttgg
      721 tggagtccaa gaatgtcatc attttccagg agcaagtggg ggatgggctc ttctgggatc
      781 accagaactt tgacacccgt gctgtccagg acagccctat ctcccttctc tttctttagc
      841 aatagagtac agcattatcc cttt
//
