LOCUS       NM_001400995            3024 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus ras homolog family member U (Rhou), mRNA.
ACCESSION   NM_001400995 XM_039098190
VERSION     NM_001400995.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3024)
  AUTHORS   Hasson,S.A., Kane,L.A., Yamano,K., Huang,C.H., Sliter,D.A.,
            Buehler,E., Wang,C., Heman-Ackah,S.M., Hessa,T., Guha,R.,
            Martin,S.E. and Youle,R.J.
  TITLE     High-content genome-wide RNAi screens identify regulators of parkin
            upstream of mitophagy
  JOURNAL   Nature 504 (7479), 291-295 (2013)
   PUBMED   24270810
REFERENCE   2  (bases 1 to 3024)
  AUTHORS   Bai,S.W., Herrera-Abreu,M.T., Rohn,J.L., Racine,V., Tajadura,V.,
            Suryavanshi,N., Bechtel,S., Wiemann,S., Baum,B. and Ridley,A.J.
  TITLE     Identification and characterization of a set of conserved and new
            regulators of cytoskeletal organization, cell morphology and
            migration
  JOURNAL   BMC Biol 9, 54 (2011)
   PUBMED   21834987
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 3024)
  AUTHORS   Tao,W., Pennica,D., Xu,L., Kalejta,R.F. and Levine,A.J.
  TITLE     Wrch-1, a novel member of the Rho gene family that is regulated by
            Wnt-1
  JOURNAL   Genes Dev 15 (14), 1796-1807 (2001)
   PUBMED   11459829
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000019.1.
            
            On Feb 1, 2022 this sequence version replaced XM_039098190.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582416.586983.1,
                                           SRR26360190.3065673.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-346               JAXUCZ010000019.1  68538960-68539305
            347-405             JAXUCZ010000019.1  68540737-68540795
            406-3024            JAXUCZ010000019.1  68546115-68548733
FEATURES             Location/Qualifiers
     source          1..3024
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q12"
     gene            1..3024
                     /gene="Rhou"
                     /gene_synonym="Rhoul1"
                     /note="ras homolog family member U"
                     /db_xref="GeneID:678766"
                     /db_xref="RGD:1596918"
     exon            1..346
                     /gene="Rhou"
                     /gene_synonym="Rhoul1"
                     /inference="alignment:Splign:2.1.0"
     CDS             76..861
                     /gene="Rhou"
                     /gene_synonym="Rhoul1"
                     /note="ras homolog family member U-like 1"
                     /codon_start=1
                     /product="rho-related GTP-binding protein RhoU"
                     /protein_id="NP_001387924.1"
                     /db_xref="GeneID:678766"
                     /db_xref="RGD:1596918"
                     /translation="MAPQQGRPALPSRCEPPAAPPVPPRRERGGRGARGPGVSGGRGR
                     AGGAEGRGVKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRL
                     QLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPTSFQNVGEKWVPEIRRHCPKAPII
                     LVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLCAEEVKAVSYIECSALTQKNLKEVF
                     DAAIVAGIQHSDSQQQPKKSKSRTPDKVRDLSKSWWRKYCCLA"
     exon            347..405
                     /gene="Rhou"
                     /gene_synonym="Rhoul1"
                     /inference="alignment:Splign:2.1.0"
     exon            406..3024
                     /gene="Rhou"
                     /gene_synonym="Rhoul1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtcgcccag ccgagtgcgg accgtgcgcc gcctttgtcc gccgctggca gctggtctcg
       61 cggtcgccgc ccgcgatggc cccgcagcaa ggccggccgg cgctgccctc ccgctgcgag
      121 ccgccggcgg cgccgcccgt accgcctcgc cgggagcgcg gggggcgcgg ggcgcgcggg
      181 cccggggtgt ccgggggtcg ggggcgcgcg ggcggcgccg agggacgcgg cgtcaagtgc
      241 gtgctggtcg gcgacggcgc ggtgggcaag accagcctgg tggtcagcta taccaccaac
      301 ggctacccca cagagtacat ccccacggcc ttcgacaact tctcggccgt ggtgtccgta
      361 gatgggcggc ctgtgagact ccaactctgt gacactgcag gacaggatga gtttgacaag
      421 ctgaggcccc tctgctacac caacacggac atcttcctgc tgtgtttcag cgtggtaagt
      481 cccacatcct tccagaacgt gggcgagaag tgggttccgg agatccgacg tcactgccct
      541 aaggccccca tcatcctggt cgggacacag tcggacctca gggaagatgt caaagtgctc
      601 atcgaactgg acaagtgcaa agagaagccg gtgccggaag aggcggcgaa gctgtgcgcc
      661 gaggaagtca aagccgtctc ctacattgaa tgctcagcct tgactcagaa aaacctcaag
      721 gaggttttcg acgctgccat tgttgctggt atccagcact cagactccca gcaacagcca
      781 aagaagtcta aaagcaggac cccggataag gtgcgggacc tgtccaagtc ttggtggagg
      841 aaatattgct gcctggcctg actcttctca aacggctagt gtttaagctg caacagctct
      901 ttacaatgtg gctgtggtca taggatgagc cctccaagca tcctcttccg ccctcaactt
      961 cctgtgtgtg tgagcccagg ttgagattca tatgcaaaat atgtttaaaa aatttttttg
     1021 aaagttaaga tttttttttc ctcgtaagtc tgagaactta gagctctgga ttaacttata
     1081 tttcatatga aaagggctct tcaaagctgg ggtgtcagca tgaagtcctg tttcgttgtt
     1141 caggacaaag gagaacgggg ccttctcctg attaagggct actgagtgct cagtgcggga
     1201 tgcgtgtgca tcagacttgg cgagagtggg tgcgaacttt gaaaccacac aaaccatccc
     1261 cagtttcata agagcaaaca tttgaaaaca gagaggggct tctgcttaca aaacctcgtg
     1321 cccatccctt ctgtttgttt actcagattc acttaggatt ttaaaacaac caaaacatcc
     1381 cacagcctac tggcattgtg ttgacagaac agtacacttg cttgttcctt tttttttttt
     1441 taaaatcacg tgaccagttt tgttgctgtg aaaatggtgg aaatgcctct tggggggcaa
     1501 gggctgggtg cacatctgac attttcttca gggagcgact cgtgctgaga tcagagaatg
     1561 ctcttagctt tcaggacttc aggtcatctt aacatgtggg atgtacacac tttgaacccc
     1621 agtgccttca gggtcctgtg actagggagg cactgtatta ggggggcagg tatatgcaag
     1681 gcctcaccca gcagcttctc actgggggtc acgcttgtgg cacttgtcct gtaaggcgag
     1741 ggtcttctga ctgttctgag acagccctgt gtgaggaatg cactttcaca gggttggagg
     1801 tacttccaag acgccatagg aaccacacgt gggtcacagc tatcagttca ctgcgggcaa
     1861 gaaacctctt tatggccacc tggtaacaaa aatttttctg tctgtgaatt ttttcttact
     1921 atttaaaaaa aaaaaatcaa ccgtatgttt ttctatagga aaaaaaagta aaagagcagg
     1981 ccgtacttca ggtcaaagac ttcctcctgc tggtaaatag gactgaagac tttcttacat
     2041 aattaaaagg ctaatggcag aaccactaga gtacatgaac tgttagccag tgatattagc
     2101 catgttctcc tgatgtgttt ccttctggcc cgagtggcaa cattgtttca ctcatgaaaa
     2161 tgcttgtaac tgacctggtg actgagctta tcctattgtg cgtggctgtc tggagagcca
     2221 gcctacacgt ggggcttttg cctgccctgt gtacagaggg tgggtgggga agagtgagtt
     2281 atttaatttt aaatgttata ataaaaaagc caatgtagtc gagaccaagg agatgagcat
     2341 ctgaggacac aaacttgaag tcatgggcca ggactgttgg acctcctgcc tctgggaagt
     2401 gtcgtaaaaa ggacgctgtg tgatcgagtt ctggacacta ttctgggatg catacccctg
     2461 gactgtttat gccacaaatg tagtgggttg acactgactg gcaagttttc gatgttcctc
     2521 catcctgtgg agtcataagt aaggtctgac tgtacttgag gttttcctgc atttttacgt
     2581 tttgaaaata gaagtttggg ctgagaaatt taaaagcatg tgcctgggtg ggattaaagt
     2641 tggttctctt caaagctgaa aagcggctgg aggctcagcc tggtgtctgg gaggattctg
     2701 tgagctgtgt ggagaggtgc ctcttcagcc ttgcctcggt gtaggccgac tcacctcacc
     2761 cgaaaagcca cactgtagca ggctccaaaa tcgtcacctc aagcctgggt gagagcaaac
     2821 tttcgatgac tttgttttct gctcgacaga cgtgcaagca gctacccaga agtctcaagc
     2881 caaaaggggg ggcttcgctc ctctgcaggt gccttaccaa cgtgtgctct tctctttccc
     2941 gtgtcaaaga tgtcggacag gatcttgtac ttgaaaaatg ctataaatga gatgctatga
     3001 aataaattct gacctgtgga caga
//
