LOCUS       NM_001398958            1991 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus ras homolog family member F, filopodia associated
            (Rhof), mRNA.
ACCESSION   NM_001398958 XM_001073389
VERSION     NM_001398958.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1991)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   2  (bases 1 to 1991)
  AUTHORS   Ellis,S. and Mellor,H.
  TITLE     The novel Rho-family GTPase rif regulates coordinated actin-based
            membrane rearrangements
  JOURNAL   Curr Biol 10 (21), 1387-1390 (2000)
   PUBMED   11084341
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On Dec 28, 2021 this sequence version replaced XM_001073389.7.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643299.50519.1,
                                           SRR26643294.46458.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-161               JAXUCZ010000012.1  39092291-39092451
            162-249             JAXUCZ010000012.1  39092710-39092797
            250-359             JAXUCZ010000012.1  39105424-39105533
            360-494             JAXUCZ010000012.1  39105611-39105745
            495-1991            JAXUCZ010000012.1  39106032-39107528
FEATURES             Location/Qualifiers
     source          1..1991
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q16"
     gene            1..1991
                     /gene="Rhof"
                     /note="ras homolog family member F, filopodia associated"
                     /db_xref="GeneID:690130"
                     /db_xref="RGD:1584038"
     exon            1..161
                     /gene="Rhof"
                     /inference="alignment:Splign:2.1.0"
     CDS             24..659
                     /gene="Rhof"
                     /note="ras homolog family member F (in filopodia)"
                     /codon_start=1
                     /product="rho-related GTP-binding protein RhoF"
                     /protein_id="NP_001385887.1"
                     /db_xref="GeneID:690130"
                     /db_xref="RGD:1584038"
                     /translation="MDAPGAPAPAAAPSSARKELKIVIVGDGGCGKTSLLMVYCQGSF
                     PEHYAPSVFEKYTASVTVGNKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMN
                     PTSYDNVLIKWFPEVTHFCRGIPMVLIGCKTDLRKDKEQLRKLRAAQLEPITYTQGLS
                     ACEQMRGALYLECSAKFRENVEDVFREATKVALSALKKAQRQKKQRICLLL"
     exon            162..249
                     /gene="Rhof"
                     /inference="alignment:Splign:2.1.0"
     exon            250..359
                     /gene="Rhof"
                     /inference="alignment:Splign:2.1.0"
     exon            360..494
                     /gene="Rhof"
                     /inference="alignment:Splign:2.1.0"
     exon            495..1991
                     /gene="Rhof"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atccagcgct gcggctccgg gctatggacg ccccgggtgc tccggcccca gccgccgccc
       61 ccagctcggc gaggaaggag ctgaagatag tgatcgtagg tgacggcggc tgcggcaaga
      121 cgtccctgct aatggtgtac tgccaaggtt catttcccga gcactatgcc ccgtcggtgt
      181 ttgagaagta cacggctagt gtgacagtgg gtaacaagga ggtgaccctg aacctctacg
      241 acacagccgg gcaggaagac tatgatcggc tgcgcccgct gtcctaccag aacacgcacc
      301 tcgttctcat ctgctatgac gtcatgaacc ccaccagtta cgacaacgtc ctcatcaagt
      361 ggttccctga agtcacgcat ttctgccgag ggatccccat ggtgctcatc ggctgcaaga
      421 cggacctgag gaaggacaag gagcagctgc ggaagctccg ggcggcccag ctggagccca
      481 ttacctacac acagggcctg agtgcctgtg aacagatgcg aggcgcgctc tatctggaat
      541 gttctgccaa gtttcgggag aacgtggaag atgtcttcag ggaagccacc aaggtggccc
      601 tcagcgccct gaagaaagca cagaggcaga aaaaacagag gatctgcctg ctgctgtgac
      661 cctaggggca gagggcctga gtggaactaa catagccggg gacccaggcc caggctcctt
      721 ctgaggctct gccccagcgc agccccccag tgtctggcat ctggggctag acgctcagaa
      781 cattctggaa tggcccccct tgggttcagg ctgcagtgca ctggtgaatg agggcgccag
      841 acccaccaat gttcctctac cctgggactg gcatttgtcc caggccacag aggcgccctt
      901 gtcacagctc cactttgccc caagccatgc gtgtctccct ttctaaaccc aactcatgcc
      961 tgaaactcag aacggcactg agagctgtgg gtaaacacgg atgtgcaacg cggttcacga
     1021 gagtcccgag cccagtgttt ctgtcactgt ctccctgagc tcctgagata ggctgggcta
     1081 catcctccag cctcttcctg cttcccctca ggaacctggg gaccacagcc tatcaggaga
     1141 acacaggctt caagccggac atggggctgg caccagcctc tctcttccta ccacactgag
     1201 gacttctgtc tcaggcttgg tcacagtctg agacacatgt tcagagggag aagaaacaat
     1261 ctgtcaaagt gtcaaataga ctcgggccag ccagcccacc catctgatcc ctgttccagg
     1321 tctgatctcc aaccccctcg ccccccagcc agcttccatt ggaaattcct aatggtcagt
     1381 gcttgtccta cctttagggg cctcaggcaa atgggctctc cctagactat ggcccacctg
     1441 taaaggccag gtttgggcta tttagatagt caagcttctc gccacctgac tccatttctg
     1501 cttctactgg gtgtggagct caggagtgga ctacctctgc ctccttccag aactgacatg
     1561 gccaccccca cccacgctgg acagtttctc agaactagcc tgctgaccac cagtgtctga
     1621 ccacgttctg gaaggtctag agtctgcctt tcagaactgt tcaagcccag tgtaccaggt
     1681 aggtttaggg cctccaggat ggaaggcacc atctgagaag ccgtcacgat cttggctggc
     1741 ctgtctgcta cagcgccact tgacttggcc ccccggagtc agactgccaa ggaaagagac
     1801 ttccggcccc cttccccaaa tgctccaagg ccctgctgtc ccctgtggaa ccaaccaaga
     1861 cctcgtgttc tctcagaatc gatggccttg tggacagatt gcggtgtata cagcagcagt
     1921 cagcaaacca cagcctgtgg gccgcatgtg gccgctgcct gtttttgtaa ataaagtttt
     1981 attgaacagc c
//
