LOCUS       XM_006239268            1392 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Rh blood group, D antigen (Rhd),
            transcript variant X1, mRNA.
ACCESSION   XM_006239268
VERSION     XM_006239268.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006239268.4.
            
            On Jan 21, 2021 this sequence version replaced XM_006239268.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1392
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1392
                     /gene="Rhd"
                     /gene_synonym="Rh; Rhced"
                     /note="Rh blood group, D antigen; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 46 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:60414"
                     /db_xref="RGD:620451"
     CDS             74..1204
                     /gene="Rhd"
                     /gene_synonym="Rh; Rhced"
                     /codon_start=1
                     /product="blood group Rh(D) polypeptide isoform X1"
                     /protein_id="XP_006239330.1"
                     /db_xref="GeneID:60414"
                     /db_xref="RGD:620451"
                     /translation="MGSKYPRSLRCCLPLWAFGLQVTFILLFYFLIGQDPIQADHKFM
                     AIYQVIQDLTLVAALGFGFLSSSFRRHGWSSVAFSFFMLALGVQGTILLDYFLNWVLD
                     WNMIKNPFSPFLSIQRATISTLPLLISAGAVLGKVNLVQLAVMVLVEAMTFGAIRVAD
                     KKVFRIEDHIIMMYGHVFGAYFGLTVAWWLSKSLPRRRHENAQTEKVQMTTSSSLFAM
                     LGTLFLWIFWPSINSALLEGTKKKNAVFNTYYALAVSTVTATSMSALSHPKGKINMVC
                     LSDLLLNPSGIHYTFGLPGLLGALTYYCLHIIAESRPSNLWIVTQTITDVGALSFAMA
                     MGMVTGLLTGCLLSVKVWRAPHAVKYFDDQAFWEFPHLAVEF"
ORIGIN      
        1 tccttcaagt gggtgtgggg gacaccggtg aagcctgcag ctgacagaac ttgggcacag
       61 cggcagacac aagatgggct ctaagtaccc aaggtccctc cgctgctgcc tgcccctgtg
      121 ggccttcggg ctacaggtga cttttatcct cctcttctat tttctcatcg gccaagaccc
      181 tatccaggca gatcacaagt tcatggcgat ctatcaagtc atccaggatt tgacccttgt
      241 ggcagccttg ggtttcggct tcctgtcctc atcctttcgg agacacggct ggagcagtgt
      301 ggccttcagc ttcttcatgt tggcccttgg ggtacagggg acaatcttgc tggactattt
      361 cctgaattgg gtcctcgact ggaacatgat caagaatccg ttcagtccgt ttctcagcat
      421 ccagagagct accataagca ccttaccgct gctgatctca gcgggcgctg tcttggggaa
      481 ggtcaacttg gtgcagctgg ccgtgatggt gctggtggaa gctatgacct ttggtgccat
      541 cagagtcgct gacaagaagg tcttcagaat tgaagaccac ataatcatga tgtacggaca
      601 cgtgtttggg gcctattttg ggctgactgt ggcatggtgg ctttccaagt ctctgcccag
      661 gagaaggcat gagaacgccc agacagaaaa ggttcagatg accacgagct ccagtctgtt
      721 tgccatgctg ggcaccctct tcttgtggat attctggcca agtatcaact ctgctctcct
      781 ggaagggaca aagaaaaaga acgcagtgtt caacacctac tacgccctgg cagtcagcac
      841 agtgacagcc acctccatgt ccgccctgag tcaccccaaa gggaagatca acatggtgtg
      901 tttgagcgac ttgctgctga accccagtgg gatccactac accttcggct tgcccggcct
      961 gctcggagca ctcacctact actgcctcca tataatagcc gagtccaggc cctccaatct
     1021 ctggattgtc acccaaacga tcactgacgt cggggctctc agctttgcta tggcgatggg
     1081 aatggtgact ggactgctga caggttgtct cctaagtgtc aaagtgtgga gggctcccca
     1141 tgcagtcaag tactttgatg atcaggcttt ctgggagttc ccccacttgg ctgtcgaatt
     1201 ttaagcaaaa ccatctgaga acgaggctga gcacggcgag cccttccttc accttccatt
     1261 tgtctgcatc atgtgttaca agaaaggctt ccgagtgatg gtcgaagttt aaatatgttc
     1321 gctttcatga cagatacgat caatactttt ggctgaagac acctcattaa agttctggtc
     1381 taattctacg ca
//
