LOCUS       XM_039105631            2005 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Rh family, C glycoprotein (Rhcg),
            transcript variant X1, mRNA.
ACCESSION   XM_039105631
VERSION     XM_039105631.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039105631.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2005
                     /gene="Rhcg"
                     /note="Rh family, C glycoprotein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     ESTs, 14 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:293048"
                     /db_xref="RGD:727859"
     CDS             54..1616
                     /gene="Rhcg"
                     /codon_start=1
                     /product="ammonium transporter Rh type C isoform X1"
                     /protein_id="XP_038961559.1"
                     /db_xref="GeneID:293048"
                     /db_xref="RGD:727859"
                     /translation="MSQSYKRRPVLGAQGTERPAVQSMAWNTNLRGRLPITCLILQVT
                     MVVLFGVFVRYDIQADAHWWLEKKRKNISSDVENEFYYRYPSFEDVHAMVFVGFGFLM
                     TFLQRYGFSAVGFNFLLAAFGIQWALLMQGWFHFFEEGHILLSVENLIQADFCVASTC
                     VAFGAVLGKISPMQLLIMTFFQVTLFTVNEFILLNLIEAKDAGGSMTIHTFGAYFGLT
                     VTWILYRKNLEQSKQRQSSVYHSDLFAMIGTLFLWIYWPSFNSASSFHGDTQHRAALN
                     TYLSLAASVLTTVAVSSVIHKKGKLDMVHIQNATLAGGVGVGTAAEMMLTPYGALIVG
                     FFCGILSTLGFAYLSPFLESRLRIQDTCGIHNLHGIPGIIGGIVGAVTAAYSSPDVYG
                     EPGIVHSFGFGGYKADWTKRMQGRSQIFGLLLSLAMALVGGIIVGFILKLPFWGQASD
                     ENCFEDAIYWEVPEEVNTVYIPEDLAHKHSTSLVPAIPLVLSTPSASIVPPVPPTPPA
                     SLATVTSSSLVH"
ORIGIN      
        1 gccctgggcg cgtgggcggc accagggtca gtgttgcgcg tccgccccgc ccaatgtccc
       61 agtcttataa gcgtcgccct gtcctcggag cccagggtac tgagcgaccg gcagtgcaga
      121 gcatggcctg gaacaccaac ctccgggggc ggctgcccat cacctgcctg atcctgcagg
      181 tgaccatggt ggttctcttc ggcgtgttcg tgcgctacga catccaggct gatgctcact
      241 ggtggttgga gaagaagcgc aagaacatct ccagcgatgt ggagaacgaa ttttactatc
      301 gctatccgag cttcgaggat gtacacgcca tggtcttcgt gggcttcggc ttcctcatga
      361 ccttcctgca gcgctatggg ttcagcgctg taggcttcaa cttcctgctg gcagctttcg
      421 gcatccagtg ggcgctgctc atgcagggat ggttccattt ctttgaagaa ggccacattc
      481 tcctgagcgt cgagaacctc atccaagccg acttctgtgt ggcatctacc tgtgtggcct
      541 ttggggcagt tctaggcaag atcagcccaa tgcaactgct cattatgacc ttcttccaag
      601 tgactctctt cacagtgaat gagttcatcc tcctgaacct gatagaggca aaggatgcag
      661 ggggctctat gaccatccac acatttggcg cctactttgg gctcacagtg acctggatcc
      721 tctaccgaaa aaacctggag cagagcaagc agaggcagag ttcagtgtac cattcggacc
      781 ttttcgccat gattggtacc ctcttcctgt ggatatactg gcctagcttc aactcagcca
      841 gttccttcca cggagacacc caacaccgag cagccctcaa cacctacctc tccttggcag
      901 ctagtgtgct aaccacagtg gcagtgtcca gtgtcataca caagaagggc aagttggata
      961 tggtgcacat ccagaacgcc acacttgcag gtggggtggg tgtgggcaca gccgcggaga
     1021 tgatgctcac accttacggc gccctcatcg tgggtttctt ctgtggcatc ctctccaccc
     1081 taggatttgc ctacctatcg ccattcctgg agtcccgtct tcgaatccag gacacgtgtg
     1141 gcattcacaa cctgcacggc atccctggca tcataggtgg cattgtgggt gctgtgacag
     1201 cggcctactc ctcccctgac gtgtatggag agccggggat agtccattcc tttggcttcg
     1261 ggggttacaa ggcggactgg accaagagaa tgcagggcag gtcccagata tttggcctcc
     1321 tcctgagctt ggccatggcc ctggtgggag gcatcattgt gggattcatt ttgaaattgc
     1381 ccttctgggg gcaagcctcg gatgaaaact gcttcgagga cgccatctac tgggaggttc
     1441 ctgaagaggt gaacactgtc tacattcctg aggacctcgc tcacaaacat tctacctctc
     1501 tggtacccgc aatacctttg gtactttcaa ccccttcagc atccatagtt cctccagtcc
     1561 ctccgacacc tccagcatcc ttagcaacag taacttcatc atccttggta cactgaactc
     1621 ccagggcagg ctccacagat tgtcaccatg ctctggaacg agctggggct gacttcgctg
     1681 ggaactctgg agcagggcag ctgaaaggcc cactggcctg actctagcac ctccctcagc
     1741 tccttcatcc cagggggctc gcctgagaat ggaggagatt cctgacaaag tgagctccaa
     1801 gccagggtca gctgtagaag gtctgcccct gcctggggtc atgatgctca tatcctgtga
     1861 aaagcaccat gaagagaggc tgaggttggg ggtgggatgg gggtgtggag cgggagggct
     1921 tggtcccctg ggttacccct ctttggactc ttccagcctc tgcctgttcc ccaacaatac
     1981 ttcccatgtt cccaagatca ctcta
//
