LOCUS       NM_001105819            3750 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus rhomboid like 3 (Rhbdl3), mRNA.
ACCESSION   NM_001105819 XM_001080979 XM_213408
VERSION     NM_001105819.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3750)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473948.1.
            
            On or before Oct 3, 2007 this sequence version replaced
            XM_213408.4, XM_001080979.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760384 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..3750
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q26"
     gene            1..3750
                     /gene="Rhbdl3"
                     /gene_synonym="Rhbdl4"
                     /note="rhomboid like 3"
                     /db_xref="GeneID:287556"
                     /db_xref="RGD:1311901"
     exon            1..362
                     /gene="Rhbdl3"
                     /gene_synonym="Rhbdl4"
                     /inference="alignment:Splign:2.1.0"
     CDS             252..1466
                     /gene="Rhbdl3"
                     /gene_synonym="Rhbdl4"
                     /EC_number="3.4.21.105"
                     /note="rhomboid, veinlet-like 4; rhomboid protease 3;
                     rhomboid, veinlet-like 3"
                     /codon_start=1
                     /product="rhomboid-related protein 3"
                     /protein_id="NP_001099289.1"
                     /db_xref="GeneID:287556"
                     /db_xref="RGD:1311901"
                     /translation="MGEHPSPGPAVAACAEAERIEELEPEAEERLPAAPEDHWKVLFE
                     KFDPGSTGYISTGKFRSLLESHSSKLDPHKKEVLLALADSHADGQICYQDFVNLMSNK
                     RSNSFRQAILQGNRRLSSKALLEEKGLSLSQRLIRHVAYETLPREIDRKWYYDSYTCC
                     PPPWFMITITLLEVALFLYNGVLLDQFVLQVTHPRYLKNSLVYHPQLRAQAWRYVTYI
                     FMHAGVEQLGLNVALQLLVGVPLEMVHGATRIGLVYVAGVVAGSLAVSVADMTAPVVG
                     SSGGVYALVSAHLANIVMNWSGMKCQFKLLRMAVALICMSMEFGRAVWLRFHPSAYPP
                     CPHPSFVAHLGGVAVGITLGVVVLRNYEQRLQDQSLWWIFVTMYTIFVLFAVFWNIFA
                     YTLLDLKLPPPP"
     exon            363..386
                     /gene="Rhbdl3"
                     /gene_synonym="Rhbdl4"
                     /inference="alignment:Splign:2.1.0"
     exon            387..545
                     /gene="Rhbdl3"
                     /gene_synonym="Rhbdl4"
                     /inference="alignment:Splign:2.1.0"
     exon            546..770
                     /gene="Rhbdl3"
                     /gene_synonym="Rhbdl4"
                     /inference="alignment:Splign:2.1.0"
     exon            771..919
                     /gene="Rhbdl3"
                     /gene_synonym="Rhbdl4"
                     /inference="alignment:Splign:2.1.0"
     exon            920..1032
                     /gene="Rhbdl3"
                     /gene_synonym="Rhbdl4"
                     /inference="alignment:Splign:2.1.0"
     exon            1033..1133
                     /gene="Rhbdl3"
                     /gene_synonym="Rhbdl4"
                     /inference="alignment:Splign:2.1.0"
     exon            1134..1194
                     /gene="Rhbdl3"
                     /gene_synonym="Rhbdl4"
                     /inference="alignment:Splign:2.1.0"
     exon            1195..3750
                     /gene="Rhbdl3"
                     /gene_synonym="Rhbdl4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgcggggag aggtagggcc cggctagccc aagggcgccc tcgcctcggg cccgtgacag
       61 aggccaagaa gtttggttgc taggggccca gcgcccctgg gtcgcggggg ccgcagttag
      121 ggcaacgggg agagcataac catgggggcg agcgcggagg cgactatgcg cgcaactatc
      181 tcctggagcg gcacggccgc ggcggcgcaa agttagcccg gcgccccggg acgagcgccg
      241 cagcctgggc catgggcgag caccccagcc ccggccccgc agtggccgcc tgcgccgagg
      301 cagaacgcat cgaggagctg gaacccgagg ctgaagagcg actgcccgcc gcgccagaag
      361 accactggaa agtcctgttt gaaaagtttg accctgggag caccggctac atcagcacag
      421 gaaaattccg gagcctcctg gagagccaca gctctaaact ggacccacac aaaaaggagg
      481 tgctcctggc tctggcggac agtcacgcag atggacagat ctgctaccag gactttgtca
      541 acctgatgag caacaaacgt tccaacagct tccgccaggc catccttcag ggaaaccgca
      601 ggctgagcag caaggccctg ttggaggaga aggggctgag cctctcacag cggctcatcc
      661 gccatgtggc ctacgagact ctgccccggg agattgaccg caagtggtac tatgacagct
      721 acacctgctg ccctccgccc tggttcatga tcacaatcac gctgctggag gttgcccttt
      781 tcctgtacaa cggggtccta ctggatcagt ttgtgctgca ggtgacacat cctcggtacc
      841 tgaagaactc tctggtttac cacccgcagc tccgcgcgca ggcttggcgc tacgtgacgt
      901 acatcttcat gcatgcaggg gtggaacaac tgggactcaa tgtggcactg cagctgctgg
      961 taggagtacc cctggagatg gtgcatggag ccacccgaat tgggcttgtc tacgtggctg
     1021 gtgttgtggc aggctccttg gcggtgtctg tggctgacat gactgcaccg gttgtgggct
     1081 cttccggagg ggtgtatgcg ctcgtctctg cccacctagc caacattgtc atgaactggt
     1141 caggcatgaa gtgccagttc aagctgctgc ggatggctgt ggccttgatc tgtatgagta
     1201 tggagttcgg gagagccgtg tggctccgtt tccacccatc ggcttatccc ccgtgccccc
     1261 acccaagctt tgtggcacat ttgggtggcg tggctgtggg catcacccta ggcgtggtgg
     1321 tcctcagaaa ctatgagcaa aggctgcagg accagtcgct gtggtggatc ttcgtgacca
     1381 tgtacaccat cttcgtgctg ttcgctgtct tctggaacat ctttgcctac acactgctgg
     1441 acttgaagct gccaccaccc ccctaaggga ccagaggatc aaggcaggga gagaagcaga
     1501 agcatccaga ggaagtaccc acatctgctt ctcatctcca attccgtgag agcagggaga
     1561 actggagagt cttggagctg gggagtgtgc attgatttag acggatggtg ggcagatgga
     1621 tgtggctgct gtctttttcc taggctggtc tgacgatata ggatcagggg taaggtctga
     1681 ggcaaggtga ggggggctgt ccctgtggct tgggtctgtc ccatgtgctc ccctgtcact
     1741 gccacagagt gagcaaatag ccctcttccc tagtctccac ctggaaagac actgagacac
     1801 agagaagttc tgaggctagc acagccaggt tttccccagc gtaggggtga ctgtaggctt
     1861 ggccatgttc tctctgcagc tcaaggtctg gtgctctggc aatggatatg atgactttga
     1921 tctggggggg cccagagtgc cccaggctta ggtcccatca gtgggtgctg aggcattgcc
     1981 cctagggctg ggcagggaga tgctataagc tccaggcctc attcttggcc taggggacga
     2041 ccctgtgcct ggggcaatga acttcattcc agtttccccc aggaaagccc caggaccagt
     2101 cttccccttc ctgcctgtag tcaagggtca gcgtctcaca ccgtcactct gcatccatgc
     2161 cctaactgct ctgtggggtc ttttcttccc tttttactgc cctgacccta ctctgtgcct
     2221 ctctctttgg gtgtggagac acagttttgt agtgggtgtg tgtgtgcgca cgcgcgtgtg
     2281 gtgatgtcag gcaaataaga agctgcagag ggaggaagta gggacagtgt accatgggga
     2341 catctatagg ggatttctgg gatgggtagc agcagagtgc tgtggagtgc tttctcagtg
     2401 gccttgcctt taacaccatg caccctcctt ttcccatctg gctctcccaa acacctgctg
     2461 agcgccattg accagcggaa aaattgtctg agctagaaag aagaccaaag ccctacattt
     2521 gggaggaaac tcagctatgt tcttctggtt cccttggggt agctttcatg tctatattgc
     2581 ctcctgcaga agaaagtctt tggaatgaag gcccaggaca atgatactgt gtgtggccat
     2641 atctccatgt gaattgatgg gaccagaagc tgtagtaaaa gatattttgg tgaaaacctt
     2701 agcctcagag aagaggtggg ggagcttggg tgagggagtt gccagagtga gagccactgc
     2761 agacttaggc tgttccatct agaggggact tggaagtaat cctacaggga aggtgagatt
     2821 gggggagtct ccttgtgctg ccccgtatcc caacagctag gggtgccagg tctggtgttt
     2881 ggcaaggtaa ctggaagctt agagcccagt gcctctgctc ctctgagaca gtctgctcaa
     2941 tctggcacta ggggcttctg gaatccctaa gtggaggcca tgaagcagat gacctttata
     3001 ttgccgttgg aactctcagc ccctatgagt ccaggatgag gaaccacagg tctgacacat
     3061 gaggagcagg gtaggaggat ggcaactgct cctggttctc tcaccatttc agcaacactt
     3121 cgcagctggt ctccatctcc cgagtccctc agcccttcct ctccagtgtg gccaccaatc
     3181 caatgtggct gggattcact cttcatgctg atagctgtag gttggcctca aaggctgggg
     3241 aaatccccaa acagcagctc tgtaggctag cttgctttta aaggagagag gagtcatgga
     3301 aaccagagaa ggaaaacagg ccttcaaaag agagaaattt ctctttaatg acatcattca
     3361 tcacttgatt ttttttaatt aggagaagct ccctaatggg ggctcttttg gctctccatt
     3421 tccaagcgaa ccattcttgc ctagagcatt agtggaggca tcgctcaccg aacccagatc
     3481 ttcctctagt gtccaattca gtttgcagat aatgaggatt acccagtgct gtgtgcttcc
     3541 cagggctggc tgcaaactgt tgactctcct ctgccttaaa aacagtgccc gtccgtgagc
     3601 tgcccctccc aggactaatt gaagaacgaa acactagcca caacgctggt ttctaaatat
     3661 ttttgtattg tgtacattct gtatattttt gttgtaacgt attatttgag agcagattcc
     3721 attaaagatt ttttttttac gctgttggtt
//
