LOCUS       XM_039112785            5645 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus regulator of G-protein signaling 6
            (Rgs6), transcript variant X5, mRNA.
ACCESSION   XM_039112785
VERSION     XM_039112785.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039112785.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5645
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5645
                     /gene="Rgs6"
                     /note="regulator of G-protein signaling 6; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 19 ESTs, 42 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     13 samples with support for all annotated introns"
                     /db_xref="GeneID:54295"
                     /db_xref="RGD:3569"
     CDS             116..1774
                     /gene="Rgs6"
                     /codon_start=1
                     /product="regulator of G-protein signaling 6 isoform X2"
                     /protein_id="XP_038968713.1"
                     /db_xref="GeneID:54295"
                     /db_xref="RGD:3569"
                     /translation="MAQGSGDQRAVGVADPEESSPNMIVYCKIEDIITKMQDDKTGGV
                     PIRTVKSFLSKIPSVVTGTDIVQWLMKNLSIEDPVEAIHLGSLIAAQGYVFPISDHVL
                     TMKDDGTFYRFQAPYFWPSNCWEPENTDYAIYLCKRTMQNKARLELADYEAENLARLQ
                     RAFARKWEFIFMQAEAQVKIDRKKDKTERKILDSQERAFWDVHRPVPGCVNTTEMDIR
                     KCRRLKNPQKVKKSVYGVTDESQSQSPVHIPSQPIRKTTKDDIRKQITFLNAQIDRHC
                     LKMSKVAESLIAYTEQYVEYDPFITPAEPSNPWISDDITLWDIEMSKEPSQQRVKRWG
                     FSFDEILKDQVGRDQFLRFLESEFSSENLRFWLAVQDLKKQPLQDVAKRVEEIWQEFL
                     APGAPSAINLDSHSYEITSQNVKDGGRYTFEDAQEHIYKLMKSDSYARFLRSNAYQDL
                     LLAKKKPESEQGRRTSLEKFTRSVCCWRRLRMAAAFHPRGGFLPAVGKVAGGQAPYGP
                     DAVLLTAPIPGSGPGPTEHPGRRRSTSNDRASLRGDLVTVKEKE"
ORIGIN      
        1 gcttgcattc ctcgggggtg ggcgcctgtc catttcagat gcgtgacagg tgcgggtgtg
       61 tgtctgcagt ttgggactgt gcacggcgag cttactgtgg gagaagacac tcaggatggc
      121 tcagggatcc ggagaccagc gagcagtggg ggttgctgat ccggaagaga gttctcccaa
      181 catgattgtc tactgcaaaa tcgaggacat cattacgaag atgcaagatg acaagacagg
      241 gggtgtgccc atcagaacag ttaagagctt tctctccaaa atccccagtg tcgtcacagg
      301 tactgacatt gtgcagtggc ttatgaagaa cctttccatt gaagacccag ttgaagcaat
      361 acacctggga agccttatcg ccgcccaggg ctacgtcttc ccaatctcag accacgtcct
      421 caccatgaag gacgatggca ccttttaccg tttccaggct ccttacttct ggccttcaaa
      481 ctgctgggaa cctgaaaaca cagactatgc catctacctc tgtaagagga cgatgcagaa
      541 caaggcaagg ctggaattgg ccgactacga agcagaaaac ttagcgagac tccagagggc
      601 ctttgcaagg aagtgggaat tcatctttat gcaagcagaa gcgcaagtca agattgaccg
      661 gaagaaagat aagacggaaa ggaaaatctt ggatagccaa gaacgggcct tctgggatgt
      721 ccacaggcca gtgccaggct gtgtgaacac aacggaaatg gatatcagaa aatgtcggcg
      781 tttgaagaat ccacaaaagg ttaaaaagtc agtatatggt gtgacagacg agtcccagtc
      841 acagagtccg gtgcacatac caagccagcc aatcaggaaa actacaaaag acgacatccg
      901 aaaacagata acgtttttga acgcacagat tgacagacat tgtttgaaaa tgtccaaagt
      961 ggctgaaagc ttaatcgctt acacggagca gtatgtggaa tacgaccctt tcataacacc
     1021 agcagagcca tctaaccctt ggatcagcga tgacatcacc ttatgggaca tagagatgag
     1081 caaagagccc agccagcagc gagtgaagcg ttggggcttc tcttttgatg agatactgaa
     1141 ggaccaggtg gggcgggacc agttcctcag attcctggag tcagaattca gttcagaaaa
     1201 tctcaggttc tggctggccg tccaagatct caagaagcaa cctctacagg atgtggccaa
     1261 gagggtggag gaaatctggc aagagttcct agctcccgga gccccaagtg caatcaacct
     1321 ggattctcac agctatgaga taaccagtca gaatgtcaaa gatggaggga gatacacatt
     1381 tgaagatgcc caggagcaca tctacaagct gatgaagagt gacagctacg cccgcttcct
     1441 acggtccaat gcttaccagg atctgttgct ggccaagaag aagccagaaa gtgagcaagg
     1501 tcgtagaact tccctagaaa aattcacccg cagtgtgtgc tgctggcgca gactcagaat
     1561 ggccgccgcg tttcaccccc gaggtggctt ccttccagca gtggggaaag tcgctggcgg
     1621 gcaagcgcct tacgggcctg atgcagtcct cctgaccgcc ccgatcccag gctcagggcc
     1681 cgggcccaca gagcacccgg gcaggcgacg ctccacatcc aacgacagag cttccttgcg
     1741 gggagatttg gtcactgtga aggagaaaga gtgagggcca tggagggcac tggtgggaag
     1801 ctgcggtggg tgaatgggga gaccagagag aaagaatcca cggtgctggg ccagctggga
     1861 gaggccctgc ttatagcctc tctcttgtac agccacacac caatgctcat tctcaacaag
     1921 ggtccatttc taactgggtc agagaatgtc tcatggggtt cctgtctgac tatctatcac
     1981 tcaagatgtt gttgaactca cctgtccagt cgtctgggga atccagcaaa cttcagaggg
     2041 accctgggca cacagtatta agcatcacct ccctaccact ctctctaaag cattggcagt
     2101 gctcactgcc atctgttccc cctccgccac cccactggta taccgggtgg gtgacggacg
     2161 ctgctttcac acaaaatgtc acatcttcag tcctaatgac cgttcaagtt ctctccaccc
     2221 tctgtgagac cacattttaa ataagtctcc acgggtgtgg tggccagccc cagttcccat
     2281 caaatgtcca aaggtccttg gcttgaagag gcaccagtac agatagtgga gtgtgttgtt
     2341 cagccactga aagttcgggt gacaatcttt taaaaatatt actacttcct gtcttctgat
     2401 ttttgcccct tgcaccttga cttgttccct tgtgtttggc tcgcaataaa catggccatg
     2461 aactcagggg ccattaggct tcatcccaat ggcagcccaa gatggaactt tctggaggtg
     2521 gatggattgt agggctggca cagggcaatg tcttaccagg cctggccgac tctcactggt
     2581 ttagggctca gttattcctg agtcttaaac acaatatgca atgacaagtc ccaaccagag
     2641 tcacagaatt cccttcccaa ccttattctg aagacccagc caaagcaccc tattagatgt
     2701 agccagtcac ctagaaaaaa gcaaaatgtg ctagagtctg caaagggaca tctgtgttct
     2761 tccggtgtgt cagaataacc atttgccagc ctggctgtga agtcttgcac ctaaagtgcc
     2821 acataggtcc caaatgagca cacaggaggt gcttggcaaa tggtggctag tacagttgtt
     2881 gtcattgtta ctgggatcac caaatgccct cagacgaaga tgtactaggc aacatgcttt
     2941 taaattcaaa tatattcttc cacacacacc tgccctgcca atacctgttg gcccctctat
     3001 tcttccacac acacctgccc tgccaatacc tgttggcccc tctatttggc cgtaggtgaa
     3061 aactcccccc ttgggagtat ataaacagag aaggaaaagg aaggaaggaa ggaaggaagg
     3121 aaggaaggaa ggaaggaagg aaggaaggca ggctggcaaa cattgcttat gtaagcaaat
     3181 ttaccagctg gtgacccaag gtccaagtgt ttgttcagtc tcagccttct gggtacatca
     3241 tgtgactcat ctgttcagct cccacctgca aagcctgtcc atgcctggct tctacacaac
     3301 cactgatcca caggcgtcct gttggtccct caaggggaat cctccgtgtc agattcttgg
     3361 ccagcacatc tgtttccagg tcagttgttc tctccttgag acatggtgga gatcagaagg
     3421 tgtctctaaa ggtgactgaa aacacccaga ctcttgccag atgctcccac tgaaccttgg
     3481 caaacagaag tagccacatg agtagtgagt gggagaagtg aagacacaac ccaagttatg
     3541 gagtcttctg gccctttctc tctaactcca cttaaaacga aataaaacaa caaacaaata
     3601 aaattcctct tatgtagaaa tagaaccctc cagtttctaa acaaaattgt agtccaaatt
     3661 catctccatc caacagtgcc caaaggaagc ttctcttcta agggcaccct aggctatgct
     3721 gacactaagg catctgattt tctcaaacaa tggttacatc atgccctcag tcatgaagga
     3781 caaggcttct ggctgcccct tggcccttct atggtctaca gaacacattc taagccaggc
     3841 tgcaacctgg gtaggataaa tttcttggcc atggcttctt gtgccctttt ctgcaccaat
     3901 tcttgtctgc tggttttgca ctgtgctgtc ctgaaaactg ggctcagagt cacccagagc
     3961 caggtatact ctagttctta gatggaacag gaggcaagct tctaacctcc cccagccccc
     4021 aggggacaga gaagcagaca ggacagtcag caggttcaat agaaccaagg acagacagac
     4081 actctagatg gattcaagcc cagatcaata aactcccacc cccacctcaa ctcccaggta
     4141 agctcaggca catggccact gtgtgtgcct cagtagatca ggcaaggagc tgagaaaaca
     4201 aagtaggaca aagtccaccc aagttgacca gcccaagaca gtttgacacg caagattata
     4261 atgcaaaggt ttgaaaaatt gaatctcagc cagcttccct ttggcctggt acacacagac
     4321 aaaatcattc ctcagcaaag caaattcctc tgccccgttc tgacccctgg aagcctggta
     4381 ggctctccta gctacatatg gtctgagagg agactacccc tataatgact tgtggaacaa
     4441 gtgtcctttt ggcagctccc cagtcttagc aggtgagaca ggcccaggca gggaagcaaa
     4501 tgctgacata aatgtctcct gaattggcaa gagtgcagat gggagacttt acatttaaat
     4561 gcccgaaatc gccctgacac caggctggcc caggtagcca gaagaaacaa cctgcctttc
     4621 tagaaagcga catgtctgtt tcacctccct gcaagctgtt gctgtacccc agaaataaag
     4681 gaggtaccaa ctgccagtga agttagtctt ctctaggctt gcccactgct cagtagctag
     4741 gtacctggct agcccccagg aagggcctct tacaatgcta agttgctgct gggactagtc
     4801 aaacctttgg gacatgccca atgggattcc tgggatgttc aaactacctc accaacagga
     4861 tacagaacca gatgcccgac cccccctgct tgttgtgaaa gttggtggtt ttcctgaaat
     4921 gagtcctcct gctctgttct gcatgtgtgg gcttcagacg ccagcaccaa gaagcctttc
     4981 cagaatgggg aaaggactga gggttgttca tctttgggcc ctggagaatt tcctggagga
     5041 aagtgttcca gcaacttcca ggaactggga agcccggggc tggagagaaa ttatgtgtca
     5101 ccagcctcca aggggacctg gctgagagat gaatttgtgg caaggacttt ggaatagttg
     5161 aatagtggtc aaaataaatt gctaataact caccactgga ctctccgaaa gaggcctgtg
     5221 ttcatgtaac caaggcaaca gcagacgcca gcaacctact cattagtgcc acccagtgat
     5281 aaggcctccc catgggcaag acccaggggc catcaagtag caaagtagca aatgtagcaa
     5341 taagggcctg ggaccctgag gtggcaggat ccaaataaca aggcctcagt cttccccaag
     5401 cctcagacag gggggcagag gtagctgcta tcagctgtct ggggttgggg agccctgccc
     5461 acaccaaggg tccctgtctt atagcctatg accattcacc gcatgataac agacacgtcg
     5521 gaatggcctc ctcttagtgc atgtggttct cgttagttta tttttctgga atttggggaa
     5581 ctggacccca ggaccaaaca tgctggaaac agtctaaaaa taaacaacta cttgaaccca
     5641 ctgaa
//
