LOCUS       NM_001107299            1656 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus retinal G protein coupled receptor (Rgr), mRNA.
ACCESSION   NM_001107299 XM_001062224 XM_224673
VERSION     NM_001107299.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1656)
  AUTHORS   Morimura,H., Saindelle-Ribeaudeau,F., Berson,E.L. and Dryja,T.P.
  TITLE     Mutations in RGR, encoding a light-sensitive opsin homologue, in
            patients with retinitis pigmentosa
  JOURNAL   Nat Genet 23 (4), 393-394 (1999)
   PUBMED   10581022
REFERENCE   2  (bases 1 to 1656)
  AUTHORS   Tao L, Shen D, Pandey S, Hao W, Rich KA and Fong HK.
  TITLE     Structure and developmental expression of the mouse RGR opsin gene
  JOURNAL   Mol Vis 4, 25 (1998)
   PUBMED   9841934
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474031.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001062224.1, XM_224673.3.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA5760383, SAMEA5760389
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1656
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p14"
     gene            1..1656
                     /gene="Rgr"
                     /note="retinal G protein coupled receptor"
                     /db_xref="GeneID:306307"
                     /db_xref="RGD:1309174"
     exon            1..118
                     /gene="Rgr"
                     /inference="alignment:Splign:2.1.0"
     CDS             40..915
                     /gene="Rgr"
                     /codon_start=1
                     /product="RPE-retinal G protein-coupled receptor"
                     /protein_id="NP_001100769.1"
                     /db_xref="GeneID:306307"
                     /db_xref="RGD:1309174"
                     /translation="MTATRALPAGFGELEVLAIGIVLLMEALSGISLNGLTIFSFCKT
                     PDLRTPSNLLVLSLALADTGISLNALVAAVSSLLRRWPHGSEGCRVHGFQGFATALAS
                     ICGSAAIAWGRYHHYCTRRQLAWDTAIPLVLFVWLSSAFWASLPLMGWGHYDYEPVGT
                     CCTLDYSRGDRNFISFLFTMAFFNFLVPLFITHTSYRFMEQKLSRSGHLQVNTTLPGR
                     MLLLGWGPYALLYLYAAVADVSFISPKLQMVPALIAKTMPTINAINYALRSEMVCRGT
                     WQCRSAQKSKQDRTQ"
     exon            119..275
                     /gene="Rgr"
                     /inference="alignment:Splign:2.1.0"
     exon            276..397
                     /gene="Rgr"
                     /inference="alignment:Splign:2.1.0"
     exon            398..551
                     /gene="Rgr"
                     /inference="alignment:Splign:2.1.0"
     exon            552..669
                     /gene="Rgr"
                     /inference="alignment:Splign:2.1.0"
     exon            670..783
                     /gene="Rgr"
                     /inference="alignment:Splign:2.1.0"
     exon            784..1656
                     /gene="Rgr"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcagaaaaga gctgggtagc tgacaccggg agtccaagga tgacagcaac cagggccctg
       61 cctgctggtt ttggggaact tgaggtgctg gctataggaa tagtcctgct gatggaagcg
      121 ctctctggca tcagcctcaa tggcctgacc atcttctctt tctgcaagac tccagatctg
      181 cggactccca gcaaccttct ggtactgagc ctggcactgg cagacactgg gatcagtctg
      241 aatgcccttg ttgcagctgt atccagtctc ctccggcgct ggccacatgg ttcagagggc
      301 tgccgggttc atggtttcca gggatttgca acagcactgg ccagcatctg tggcagtgca
      361 gccattgcct ggggacgcta tcaccactac tgcacccgta gacagttggc atgggacact
      421 gccatccctc tggtgctgtt tgtgtggcta tcatctgcct tctgggcatc cctgcccctg
      481 atgggctggg gccattatga ctacgagccc gtggggacat gctgtacact ggactactct
      541 aggggtgaca gaaacttcat cagttttctc ttcaccatgg cctttttcaa cttccttgta
      601 cccctgttca tcacacacac ttcataccgg ttcatggagc agaaactctc caggagtggt
      661 catctccagg tgaatactac tcttccaggc aggatgctgc tgctgggctg gggcccctat
      721 gccctcctgt acctatatgc cgctgtcgca gatgtgagct tcatctctcc caaactacag
      781 atggtgcctg ccctcattgc gaaaaccatg cccacaatca acgccatcaa ctatgcgttg
      841 cgcagcgaga tggtctgtag aggaacctgg cagtgccgat ctgcacaaaa gagcaagcag
      901 gaccgaaccc agtgaaattc ttcaaggggc tgatcacagt caagcctacc tcttcaagcc
      961 tgggctaagg atgccccagg tcaggaagat gctgccgtat acttcccagc cgccccagaa
     1021 accatgctag agactacttc cccaccagcc ttaagatccc tgttgagtgt aaacttaggc
     1081 tggacccaag aattcagata ataggttcag tgaaaggagt gttggtcaca gccctctaca
     1141 cacagtctaa ggggctatgg gaaagtaact ctctccaaca ccatctatct aaaccctaga
     1201 gtaaagaaga cattgtggac tagcaacggt atggttgaac aggttcacat atactcagca
     1261 agcacatcaa acactcactg aaacagatgc cgatatgagc cttggccatg tcctatgtga
     1321 atccagtttt acaataaaag gagaaagccc tgggatttgt ttttggaagt ctgaggcagt
     1381 tgtctttcaa atagcatgta ctaaattgta aaggcactgg tgacttagac tgccccttgc
     1441 tctacgtccc ttgttgtaag acaagatgac agaaatgatg atttgaccct acagattgga
     1501 ccagaacatg caggttaggg gctccctgag tcagccaata gcaccagcat tcaaaatgag
     1561 cccttggtta tatgaaattg ggattagatt gcttttaaat gttaattcat tgttagtatt
     1621 taaaaattaa agcagttatt taacgttcca gatgtc
//
