LOCUS       XM_006227983            4741 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus repulsive guidance molecule BMP
            co-receptor b (Rgmb), transcript variant X2, mRNA.
ACCESSION   XM_006227983
VERSION     XM_006227983.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_006227983.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4741
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4741
                     /gene="Rgmb"
                     /note="repulsive guidance molecule BMP co-receptor b;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 45 ESTs, 11 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 111 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:681433"
                     /db_xref="RGD:1595392"
     CDS             645..2078
                     /gene="Rgmb"
                     /codon_start=1
                     /product="repulsive guidance molecule B isoform X1"
                     /protein_id="XP_006228045.1"
                     /db_xref="GeneID:681433"
                     /db_xref="RGD:1595392"
                     /translation="MMRKRKKRGVRPGPCRSPRPGPATAPAPPPSQERTRPAWTGMGV
                     RAAPSCAAAPAAAGAEQYHRPGLWPPSPPPPLLLLLLLSLGLLHAGDCQQPAQCRIQK
                     CTTDFVSLTSHLNSAADGFDSEFCKALRAYAGCTQRTSKACRGNLVYHSAVLGISDLM
                     SQRNCSKDGPTSSTNPEVTHDPCNYHSHGGVREHRGGDQRPPNYLFCGLFGDPHLRTF
                     KDHFQTCKVEGAWPLIDNNYLSVQVTNVPVVPGSSATATNKITIIFKAQHECTDQKVY
                     QAVTDDLPAAFVDGTTSGGDGDVKSLHIVEKESGRYVEMHARYIGTTVFVRQLGRYLT
                     LAIRMPEDLAMSYEESQDLQLCVNGCPMSECIDDGQGQVSAILGHSLPHTTSAQAWPG
                     YTLETASTQCQEKMPVKDIYFQSCVFDLLTTGDANFTAAAHSALEDVAALHPRKERWH
                     IFPSSHGGHSDLPVGLGLTCLILTMVL"
ORIGIN      
        1 gtaaaggcag cgctgcgggc ctgaagggcg gcgcagaggg cggcgctggc ggcgtgaaag
       61 gcgcctttgt gcaagcaagg gtgtaggagc cgggaagagg agagatcggg acctggaagc
      121 aggggtagaa gcgtcccaca ctccctgccg tcgggtctcc agccggacag tagggcagtg
      181 aggtggagtg gggaccggcg cggcggaggt tgtctgccgc tgcggctggg ggcaggagtg
      241 ggaaagaggc agtttggagg aagttgggga gagggacctg tctccccgcc ctctccccct
      301 aggtgacaga gaggccctgc tggctggcag ggtgcgagca ctgccccgga gctcactccg
      361 gaaccggcat ctggagagcg gcccccgggt ggagccgccc gcctgccgcc cacctggggc
      421 agagtggcgg gcgcggcgtg gcctccctcc agcgccccgg ccgcgtggct tgcggcttat
      481 tttcccagct ggcaagcgtc gcgctgcaga caagggaatg cctgtgggac tcagcgctca
      541 tacggagccc tggggctctt ctctcacacc taggtcctgc gtgttccgga gctcgggggc
      601 atcctgatcc cgctgagccc cctccaggtg cagaagggtt aagaatgatg aggaagagga
      661 agaagagagg cgtgcgccct ggcccatgcc gcagcccgag gcccggccca gccactgcgc
      721 ccgcgccgcc gccctcgcag gagcgcacga gacctgcatg gacgggcatg ggcgtgagag
      781 cagcaccttc ctgcgccgcc gcccccgccg ccgccggggc tgagcagtac caccgccccg
      841 gactctggcc gccgtcgccc ccgccgccgc tgttgctgct gctgctgctc agccttggac
      901 tgctccacgc aggtgattgc caacagcctg ctcaatgtcg aatccagaaa tgtaccacag
      961 acttcgtgtc cctgacttca cacctgaact ccgcggccga tggctttgac tctgagtttt
     1021 gcaaggcact tcgtgcctat gctgggtgca cccagcgaac ttcaaaagcc tgccgtggca
     1081 acctggtgta ccattctgcc gtgttaggta tcagtgatct catgagtcag aggaactgtt
     1141 ccaaggatgg acccacatcc tccaccaacc cggaagtgac ccatgacccc tgtaactacc
     1201 acagccatgg gggagtcaga gaacacaggg gaggggacca gagacctccc aattaccttt
     1261 tctgtggctt gttcggagat cctcaccttc gaactttcaa ggatcacttc caaacgtgca
     1321 aagtggaagg ggcctggcca ctcatagaca acaattacct ttcggttcaa gtgacgaacg
     1381 tgcctgtggt ccctggatcc agcgcaactg ccacgaacaa gatcaccatt atcttcaaag
     1441 cacagcatga gtgcacggat cagaaggttt accaagctgt gacagatgac ctgccggctg
     1501 cctttgtgga tggcaccacc agtggggggg acggtgatgt gaagagtctt cacatcgtgg
     1561 agaaggagag tggccgatac gtagagatgc atgcccgcta cataggcacc acagtgtttg
     1621 tgcgacagct gggtcgctac ctaaccctcg ctatccggat gcccgaagac ttggccatgt
     1681 cctacgagga aagccaggac ttgcagctgt gcgtgaatgg ctgccccatg agtgaatgca
     1741 ttgatgatgg acaaggccag gtgtctgcta tcctggggca cagcctgccc cacaccacct
     1801 cagcacaggc ctggcctggc tacacactgg agactgccag cacccaatgc caagagaaga
     1861 tgccagtgaa ggacatctat ttccagtctt gtgtctttga cctgctcacc actggtgatg
     1921 ccaactttac tgctgcggcc cacagtgcct tggaggacgt ggcagcgctg cacccgagaa
     1981 aggaacgctg gcacatattc cccagcagcc atgggggaca cagcgatctg cctgttggtc
     2041 ttggactcac gtgcttgatc cttactatgg ttttgtagga gttctctgtt gtttttgttt
     2101 tgtttttctg ttttgttttg gttttttgtc tatagcaaaa ttttaaatat atattgtcat
     2161 aatatattga gtgaaaaagt atatatgtat ataccatgta tatgacagat gtttgtcctg
     2221 gaacaccaga ttgtacatta tgtgtttggc tgttttcaca tatgtctgtt atagtgtttt
     2281 ttgattgtat caattttgtt ttgccgtttt gtgaaatgtt ttataatgtc cctgcctagg
     2341 gacctcttag aaagcacttt attttttata tattaaatat ttatgtgtgt acctggttaa
     2401 tatgtacagt gcatatacac agacaccaac cacagcaatc cctttggagg tgactaattt
     2461 atagctcctc tggttgctcc tcctgccctt cccgttacta ctgatttgcc aaggtaccgg
     2521 ttcctgatgg agctgtctcc cttcctttga agtctcaatt tgaaagttgt cccctcactt
     2581 gtaagtactt ttgattctta aaatgtggat ctcactaaag agccccattt ctaacagctc
     2641 acttttccag aacatggggg cattagtgct acacctgcag ccattactca tgtgcatttg
     2701 agcacatatg gccgattaga ttgacccttc tgaagctgct ctttgtcagg tgccagtctg
     2761 gaggtggcca tttcaagtga ataccaggca ccttgctata gcccagctaa taactctttt
     2821 ccatcctctg tccctgttta aactgtactt tcccctccat taagtcgtta ggcaaaacaa
     2881 aaccatcagc ttagaagaga tcatgcctcg ctctccttgg taatttgtaa aactcacgtt
     2941 cttaactttc tccttggctg cttggagtcc taacagtgtt ctctggctct gctccagcat
     3001 ctccttaacc tcccctcagg attccaaaca ctggctgtta gtactcctct gattgaggtc
     3061 cagtggtaca gccttaagaa cagaaaaatc tgtcttggtg tatattagtg ggcacttgcc
     3121 catggatgct attgagtcct ggtgttaata accaggcatt tcactcccca agtgatgtcc
     3181 acctttgcag ctgtctgcca tcttaacacc tgtagatgaa tattatagtt acctgccagt
     3241 tagtgaaatc ctcctcaagt aaaatctctc cttgcctctt ccattacacc agctataaaa
     3301 gggacataac agaagacagt gagactagca aagttaactc ccgagtaggt aggtttgtat
     3361 tctatctaaa tgtgtttggt tccaaaaagt aataggattt gtgttttcat atttaaggtt
     3421 tgcattaatg cgctcgcaaa gatacaaacc ttaaataaag tcattgggac atggcgatgc
     3481 cctttgacat gtcctgttgg ccagggggac tgacaggcaa aggctgtcag taaacggaat
     3541 cttttgtgaa gttgtgtttc ttagagaagt gatctcaccc atgggatgct catgtagagg
     3601 tggcagattc ttaccttggg ggcagttagg aaggtaccct gctttgtgtt cttaaaggtt
     3661 gaactccaga gaattaggat ctagcccttt gaaagaaggt ccttgtaaga aagctgtatt
     3721 aggaccaacc aaccctgagc cttgaagcat ggccaccttt gttcacctat gaagccatgt
     3781 gccaagctca gaagctgtca atagctaagt gacttgtaat tgagtagaac gagggaggga
     3841 gagtgttgga tacttttaac cactattttt gtgcaaatgt aaaagtaaaa tagaaggtcc
     3901 tgccgtgtct tcctttagag tatgtgatcc atacaccttt gatccttttg aggagaacaa
     3961 agccaccatg tctatccata gtttggaaga gaaagtttgc ctgtttagct gtgttgttta
     4021 gctgggaagg gtggatgcca tgatacacta cagcagtagt attagtaata gcgtgttgga
     4081 ggttctcctt catattagtg tccctacgcg tcctttacgg ttcccacaga taacttttag
     4141 aagtaaagta cttctgtaga gaagggccag attttctttg gggtttctaa ggaacatagt
     4201 gcttcaactt gtttcatgaa gtccatagcc agaagaattt cagcccgtac tggcaaacag
     4261 ataggctatt gcttttcacg ggtctcctgg gagagcttga aacttggggc aaaaacactg
     4321 attttttcac agatcttccc aggtctctct taggaaagac tcaaaaaaca cattgccctc
     4381 tttgctgtgc ctgaaaccca cccccattgt gtcgagtcct tgcagagaaa cctgtagatg
     4441 tggttcatag gtatatgagt aagcatctgt gtaaaagcag tgagtgtgtg ctatgtaaat
     4501 acgttaaatt attatgctag aaaaataaag ttacggacca tgctgcccca tgtctgctct
     4561 gtgattacag tgacacctgt tggacgagct gaggaacctc tgcaggagga ggaagggact
     4621 taatacctaa tcagttttca tgagttgtac ttgcccacta gcccgcttga ctgttactgt
     4681 agttcttttt ttttataacc tttaagcgat cacaaataaa gcagtgcccc actggtccga
     4741 a
//
