LOCUS       XM_006252899            1361 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus regulatory factor X-associated
            ankyrin-containing protein (Rfxank), transcript variant X1, mRNA.
ACCESSION   XM_006252899
VERSION     XM_006252899.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006252899.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006252899.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1361
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1361
                     /gene="Rfxank"
                     /note="regulatory factor X-associated ankyrin-containing
                     protein; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 mRNAs, 16 ESTs, 1 long SRA read,
                     8 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 51 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:306353"
                     /db_xref="RGD:1311390"
     CDS             375..1229
                     /gene="Rfxank"
                     /codon_start=1
                     /product="DNA-binding protein RFXANK isoform X1"
                     /protein_id="XP_006252961.1"
                     /db_xref="GeneID:306353"
                     /db_xref="RGD:1311390"
                     /translation="MEPTQVAENLIPNQQSLAPDLEDPEDRRDESPDSSDTVVLSLFP
                     CTPDAVNPEADASASSLQVPAASVWTPLAQAQTPGEQALPLLAGSFLKHSTTLTNRQR
                     GNEVSALPATLDSLSIHQLAAQGELSQLKDHLRKGDNLVNKPDERGFTPLIWASAFGE
                     IETVRFLLDWGADPHILAKERESALSLASMGGYTDIVRLLLDRDVDINIYDWNGGTPL
                     LYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVMESHILKLFQG
                     TLGPADPE"
ORIGIN      
        1 accagggcag ggaaattgtt aaggacgagg tgacaataat actcggtctc tttaaatttg
       61 acaagactcg cccacgcgtc tccgcctccg tctcagaatg ctccgccctc ccatcatacg
      121 tggatccgat tggggaacac aggacagggg tgcgcaggcg cagtggagga gttctcctgt
      181 aggaatagtc ctggcgtatt aagttgctgc tctatgtccc agcagaagaa gctagaggac
      241 tgggcgtccg gtcaccaact tgctcctcac gagatctact ggactagaaa agtttgtgaa
      301 cagagcttcc cgagttttgg gagagccagg ctggcagcgt aagggaacgg aggaggctgg
      361 agggagcttc ctcgatggag cccactcagg ttgcagagaa cctcatccca aaccagcagt
      421 cccttgctcc tgacctagag gatcctgagg accgcagaga tgaatcccca gatagctctg
      481 acactgtcgt cctcagtctg ttcccctgca ccccagacgc tgtgaatcct gaggcagatg
      541 ccagtgcatc ctcactacag gttcctgcag catctgtctg gacacccttg gcacaagccc
      601 aaacaccagg ggaacaagcc cttcctctcc tcgcaggaag tttcttgaag cactccacaa
      661 ccctcacaaa ccggcaacgt gggaatgagg tctcagctct gccagccacc ctggactccc
      721 tgtctatcca ccagcttgca gcccaggggg agctgagtca actgaaggat cacctgcgaa
      781 agggtgacaa cctggtcaac aagccggatg aacgtggctt cacccccctc atctgggcct
      841 cagcctttgg agaaattgag acagtacgct tcctgctaga ctggggtgct gacccccaca
      901 tcctggccaa ggagcgggaa agcgctctgt cgcttgccag tatgggtggt tacacggaca
      961 tcgtgaggtt gctgcttgac cgtgatgtgg acatcaacat ctatgactgg aatgggggga
     1021 caccactgct ctacgctgtg cgtgggaacc atgtgaagtg tgtggaggcc ttactcgccc
     1081 gaggtgctga cctcaccaca gaggccgact ctggctacac cccaatggac ctcgccgtgg
     1141 ccctaggata ccgcaaagtg caacaggtga tggagagcca catcctcaaa ctgttccagg
     1201 gtaccctggg gcctgcggac ccggagtgaa gacagcctgt tgggaaccca ggcactcagg
     1261 gacaaaccag tcagcccaca actggcttgg aaggcagctc ctggacagtg gtgggaagag
     1321 ccctccccaa caggaaccaa taaatctgtg cagaacttga a
//
