LOCUS       NP_001120962            1459 aa            linear   ROD 01-APR-2024
DEFINITION  DNA-binding protein RFX7 [Rattus norvegicus].
ACCESSION   NP_001120962 XP_001053787 XP_236392
VERSION     NP_001120962.1
DBSOURCE    REFSEQ: accession NM_001127490.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 1459)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On or before May 22, 2008 this sequence version replaced
            XP_236392.3, XP_001053787.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643292.34496.1,
                                           SRR21887623.2221306.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1459
                     /organism="Rattus norvegicus"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q24"
     Protein         1..1459
                     /product="DNA-binding protein RFX7"
                     /note="regulatory factor X domain containing 2 homolog"
                     /calculated_mol_wt=157229
     Region          43..100
                     /region_name="RFX5_N"
                     /note="RFX5 N-terminal domain; pfam18326"
                     /db_xref="CDD:375753"
     Region          105..183
                     /region_name="RFX_DNA_binding"
                     /note="RFX DNA-binding domain; pfam02257"
                     /db_xref="CDD:460512"
     Region          <258..578
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..1459
                     /gene="Rfx7"
                     /gene_synonym="Rfxdc2"
                     /coded_by="NM_001127490.2:586..4965"
                     /db_xref="GeneID:315804"
                     /db_xref="RGD:1308795"
ORIGIN      
        1 maeeqqqppp qqldahqqlp lsapnpgval palvpglpgt easalqhkik nsicktvqsk
       61 vdcilqevek ftdleklyly lqlpsglssa eksdqnamss sraqqmhafs wirntleehp
      121 etslpkqevy deyksycdnl gyhplsaadf gkimknvfpn mkarrlgtrg kskycysglr
      181 kkafvhmptl pnldfhktgd glegvepsgq lqnideevis sacrlvcewa qkvlsqpfdt
      241 vlelahflvk shyigtksma altvmaaapa glkgisqpsa fiptaesnsf qpqvktlssp
      301 idakqqlqrk iqkkqqeqkl qsplpgessa kktegttang vanlpngnpa ilspqpigiv
      361 vaavpspipv qrtrqlvtsp spmnssdgkv lplnvqvvtq hmqsvkqtpk tpqnvpaspg
      421 gdrsarhryp qilpkpants altirspttv lftsspikta vvpashmssl nvvkmttisl
      481 tpsnsnaplk hsasvsnatg ttedsrsipq ikngsvvslq spgsrasstg gtsavevkme
      541 pegssdehpl qcqenaegtk aplatssalw gqksntdgtv skpsnegvte vkttkvcdqr
      601 akcksrcnet lpgisagnnq stvtlsvatq nlpftstssp sngdsvnkdp klctksprkr
      661 lsatlqesqv ppvkkpiveq lsavttegqk pgtvkkdqkv phsgktesst agaqppnkvs
      721 lsvsshived qplnptlvas esaleqqttp ssspdvkvkl egsvflldre snsdgsfnrn
      781 ewqqvtkdsd fisasceqqq disvmtipeh pdihdleksv welegmpqdt ysqqlhsqip
      841 esslneiqaq ssdqlplqse lkefessvsq tnesyfpfdd eltqdsivee lvlmeqqmsm
      901 nnshsygncl gmtlqsqsvt pgapmsshgs sshfyhpihs ngtpihtptp tptptptptp
      961 tptptsemia gsqslsresp csrlaqttpv dsalgssrht pigtphsncs ssvppspvec
     1021 rnpfaftpis ssmayhdasi vssspvkpmq rpmathpdkt klewmnngyg gvgnssvsgh
     1081 gilpsyqelv edrfrkphaf avpgqsyqsq srhhdthfgr ltpvspvqhq gatvntnkqe
     1141 gfavpapldn kgtnssassn frcrsvspav hrqrnlsgst lypvsniprs nvtpfgspvt
     1201 pevhvftnvh tdacanniaq rsqsvpltvm mqtafpnalq kqtnskkitn vllskldsdn
     1261 ddavrglgmn nvpsnytarm nltqiletsp vfpsansqnm idsstsvyef qtpsyltksn
     1321 stdqisfspg dnqaqseige qqldfnstvk dllsgdnlqt sqqlggqvas dltntasdfp
     1381 sdirlssdls gsindlntld pnllfdpgrq qgqddeatle elkndplfqq icsesmnsmt
     1441 ssgfewiesk dhptvemlg
//
