LOCUS       NM_001107146            1644 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus replication factor C subunit 5 (Rfc5), mRNA.
ACCESSION   NM_001107146 XM_001080107 XM_222214
VERSION     NM_001107146.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1644)
  AUTHORS   Vannier JB, Sandhu S, Petalcorin MI, Wu X, Nabi Z, Ding H and
            Boulton SJ.
  TITLE     RTEL1 is a replisome-associated helicase that promotes telomere and
            genome-wide replication
  JOURNAL   Science 342 (6155), 239-242 (2013)
   PUBMED   24115439
REFERENCE   2  (bases 1 to 1644)
  AUTHORS   Hedglin M, Kumar R and Benkovic SJ.
  TITLE     Replication clamps and clamp loaders
  JOURNAL   Cold Spring Harb Perspect Biol 5 (4), a010165 (2013)
   PUBMED   23545418
  REMARK    Review article
            Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1644)
  AUTHORS   Li GM.
  TITLE     Mechanisms and functions of DNA mismatch repair
  JOURNAL   Cell Res 18 (1), 85-98 (2008)
   PUBMED   18157157
  REMARK    Review article
REFERENCE   4  (bases 1 to 1644)
  AUTHORS   Bermudez VP, Maniwa Y, Tappin I, Ozato K, Yokomori K and Hurwitz J.
  TITLE     The alternative Ctf18-Dcc1-Ctf8-replication factor C complex
            required for sister chromatid cohesion loads proliferating cell
            nuclear antigen onto DNA
  JOURNAL   Proc Natl Acad Sci U S A 100 (18), 10237-10242 (2003)
   PUBMED   12930902
REFERENCE   5  (bases 1 to 1644)
  AUTHORS   Ellison V and Stillman B.
  TITLE     Reconstitution of recombinant human replication factor C (RFC) and
            identification of an RFC subcomplex possessing DNA-dependent ATPase
            activity
  JOURNAL   J Biol Chem 273 (10), 5979-5987 (1998)
   PUBMED   9488738
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC168902.1.
            
            On Sep 4, 2008 this sequence version replaced NM_001107146.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168902.1, SRR8487226.32956.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q16"
     gene            1..1644
                     /gene="Rfc5"
                     /note="replication factor C subunit 5"
                     /db_xref="GeneID:304528"
                     /db_xref="RGD:1309280"
     exon            1..140
                     /gene="Rfc5"
                     /inference="alignment:Splign:2.1.0"
     CDS             82..1098
                     /gene="Rfc5"
                     /note="replication factor C (activator 1) 5"
                     /codon_start=1
                     /product="replication factor C subunit 5"
                     /protein_id="NP_001100616.1"
                     /db_xref="GeneID:304528"
                     /db_xref="RGD:1309280"
                     /translation="MAAAPSQQQPRAARARNLPWVEKYRPQTLADLISHQDILSTIQK
                     FISEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGP
                     ILSFASTRTIFKRGFKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKII
                     PALQSRCTRFRFGPLTPELMVPRLEHVVQEENVDISEDGMKALVTLSSGDMRRALNIL
                     QSTNMAFGKVTEETVYTCTGHPLKTDIANILDWMLNQDFTTAYKNIMELKTLKGLALH
                     DILTEVHLFVHRVDFPSSVRMHLLTKMADIEYRLSVGTSEKIQLSSLIAAFQVTRDLI
                     VAEA"
     exon            141..205
                     /gene="Rfc5"
                     /inference="alignment:Splign:2.1.0"
     exon            206..342
                     /gene="Rfc5"
                     /inference="alignment:Splign:2.1.0"
     exon            343..422
                     /gene="Rfc5"
                     /inference="alignment:Splign:2.1.0"
     exon            423..496
                     /gene="Rfc5"
                     /inference="alignment:Splign:2.1.0"
     exon            497..656
                     /gene="Rfc5"
                     /inference="alignment:Splign:2.1.0"
     exon            657..738
                     /gene="Rfc5"
                     /inference="alignment:Splign:2.1.0"
     exon            739..868
                     /gene="Rfc5"
                     /inference="alignment:Splign:2.1.0"
     exon            869..946
                     /gene="Rfc5"
                     /inference="alignment:Splign:2.1.0"
     exon            947..1001
                     /gene="Rfc5"
                     /inference="alignment:Splign:2.1.0"
     exon            1002..1597
                     /gene="Rfc5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgaagactc gcgagggttg gtttgcgcgc ggactccgag tccagtggtt cggtggccgg
       61 tccctgcagc atctgtcagt catggcggcg gcgccttcgc agcagcagcc ccgggcggcc
      121 cgggcccgga acctgccctg ggttgagaag taccggccac agactctggc cgatctcata
      181 tctcaccagg acatcctgag taccattcag aagttcatca gtgaagaccg cttgccacac
      241 ctacttctct atggccctcc aggcacagga aagacatcca ccattctggc ctgtgccaag
      301 caactgtaca aagataaaga attcggctcc atggtcttgg agctgaatgc ttccgacgac
      361 cgagggatcg atattgtccg ggggccaatc ctcagctttg ccagcacaag gacaatcttc
      421 aagagagggt ttaagcttgt gatcctggac gaagctgacg ccatgactca agatgcccag
      481 aatgccttga gacgagtgat tgagaagttc actgaaaaca ccaggttttg cctcatctgt
      541 aactacctgt ccaagatcat ccctgccttg cagtcacggt gcacgaggtt ccgatttggc
      601 cctctgacgc ctgagctcat ggttcctcgg ctagaacatg tggtacaaga agagaacgtg
      661 gacataagtg aagatggaat gaaggccctt gtcactctgt ccagtgggga catgcgaagg
      721 gctttgaaca ttctgcagag taccaatatg gcctttggga aggtgacaga ggagactgtc
      781 tacacctgca ccgggcaccc actcaagacg gatattgcca atattctaga ctggatgctg
      841 aatcaagact tcaccactgc ctacaaaaat atcatggagc tgaagactct gaagggcttg
      901 gcactgcacg acatcttgac agaggttcac ttgtttgtgc acagagttga ctttccgtct
      961 tcagttcgga tgcatttatt gaccaaaatg gcagacattg agtacaggct ctctgtcggc
     1021 accagtgaga agatccagct gagctccctc attgctgctt ttcaagttac cagggacttg
     1081 atagttgcag aggcctagaa aacccaaggc ctgagttgca gaagcctaga aacttggccc
     1141 ttgctcaggc ccatcggtga ctggaggaca gaagacatgc tgccctgggc cagtggataa
     1201 aatcagtcac agacttttct ccccaggcat ttagatagtg ctatctgtgg ctgtttggag
     1261 cagggatcta cagagcaact ttaatctgga agaatccatt ctgcttgtct tctatagggg
     1321 aaaatacccc gccccgtgga gagggctgct ttaaagtcgt cactgtcact ctctgggatg
     1381 acaaaattgg ctgcagtgtt catgtggaaa ctgagtgtgc ttcagtgtct cccaactctg
     1441 aatgggtgcc aggaggattc tgatctaatg ttttgttaag aatttcaaaa tcaggggttg
     1501 ggaatttagc tcagtggtag agcgcttacc taggaagcgc aaggccctgg gttcggtccc
     1561 cagctccgaa aaaaagaacc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1621 aaaaaaaaaa aaaaaaaaaa aaaa
//
