LOCUS       NM_001408785            2875 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus reduced expression 2 like 1 (Rex2l1), mRNA.
ACCESSION   NM_001408785 XM_039111349
VERSION     NM_001408785.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2875)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Jun 27, 2022 this sequence version replaced XM_039111349.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360190.1015412.1,
                                           SRR26360186.1379555.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840107, SAMN12840111
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-156               JAXUCZ010000005.1  163311909-163312064 c
            157-249             JAXUCZ010000005.1  163310763-163310855 c
            250-350             JAXUCZ010000005.1  163307045-163307145 c
            351-477             JAXUCZ010000005.1  163293072-163293198 c
            478-2875            JAXUCZ010000005.1  163289671-163292068 c
FEATURES             Location/Qualifiers
     source          1..2875
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..2875
                     /gene="Rex2l1"
                     /note="reduced expression 2 like 1"
                     /db_xref="GeneID:120093167"
                     /db_xref="RGD:40962626"
     exon            1..156
                     /gene="Rex2l1"
                     /inference="alignment:Splign:2.1.0"
     exon            157..249
                     /gene="Rex2l1"
                     /inference="alignment:Splign:2.1.0"
     exon            250..350
                     /gene="Rex2l1"
                     /inference="alignment:Splign:2.1.0"
     CDS             321..1742
                     /gene="Rex2l1"
                     /note="zinc finger protein 664-like"
                     /codon_start=1
                     /product="reduced expression 2 like 1"
                     /protein_id="NP_001395714.1"
                     /db_xref="GeneID:120093167"
                     /db_xref="RGD:40962626"
                     /translation="MSVALGNTLQGFLTFKDVAPEFTLEEWESLNYAQRALYMDVILE
                     TYNNLLSVENHLIRGKHGKVLEQYTECIVHEHVNIQKKFCKWDEISKMTLESTQSTPY
                     KTHLQDPSLQSSNLERHKAGKMREVYKYKDFVQFSNECAIIGVSSGMHTENKEHKNTE
                     FDKNFVYKHKLMLKQNINGKNLHQCSKSEKCFARKGNLHLHQRIHTGEKPYKCSQCDK
                     YFAQQSWLMRHQRIHTGEKPYKCNQCDKFFAQESHLSIHQRIHSGDKPYKCSECDKCF
                     GYKGSLRIHQRVHTGEKPYKCSECDKYFSQQSNLTIHQRIHTGDKRYKCSECDKCFGQ
                     LSNLSIHQRIHTGDKPYKCSVCDKCFGYKGSLKIHQRIHSGEKPYKCSECDKYFSQQS
                     NLSIHQRIHTGDKPYKCSKCDKCFGHRVSLRIHQRIHTGEKPNKCGEYDKCFTQNYSL
                     CLHQRLHMEEKPYKCGECDICFG"
     exon            351..477
                     /gene="Rex2l1"
                     /inference="alignment:Splign:2.1.0"
     exon            478..2875
                     /gene="Rex2l1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tccagctctc tccgtgtgta ttgtcttctt ggggatcagg aagtcctggt gggagactcg
       61 ccccggagtc ctggaggtac ctgaaaactt cctcgagctg cagttgctgt gccggcttcc
      121 taggacattc atcagctcgt cctgtcaccc tgccaggtct ccatatgctc agcaaatctg
      181 cgtaattgta aatcgaaagt aggagccctg gacggtaaag gccaaagaaa cttctaacaa
      241 aggatgcagt tctcaaatcc ggttgtgaaa tttcaagaac acttgcaata tttgaatctg
      301 ggagaagaac aacaaaaaga atgagtgtgg ctctgggaaa cactctacag ggtttcttaa
      361 ccttcaaaga tgtggctcca gagttcacac tagaggaatg ggaaagtctc aattatgctc
      421 agcgggcact gtacatggat gtgattttgg agacgtacaa caatctactg tctgtggaaa
      481 atcatctgat acgtggaaaa catgggaagg tcttggaaca atacacagag tgcattgtcc
      541 atgagcatgt gaatatccaa aagaagtttt gtaaatggga tgaaattagc aaaatgactc
      601 ttgaatccac ccaaagtaca ccttataaaa ctcatctcca agatccctct cttcagtcct
      661 caaacctgga aagacataaa gctggcaaaa tgagagaagt ttacaaatat aaagactttg
      721 tacagttttc taatgaatgt gctatcattg gtgtaagttc cggaatgcac acagagaaca
      781 aagaacacaa aaatacagaa tttgataaga attttgtcta taaacataaa ctaatgctga
      841 aacaaaacat taatggtaag aatcttcacc aatgtagtaa atctgagaaa tgctttgcca
      901 gaaaagggaa tcttcatttg catcagagaa ttcatacagg agagaaacct tacaaatgta
      961 gtcaatgtga caaatatttt gcccaacaat cctggcttat gcgtcatcaa agaatccata
     1021 caggagagaa accttacaaa tgtaatcaat gtgacaaatt ctttgcccaa gaatcccatc
     1081 ttagtattca tcagagaatt cattcaggag ataaaccata caaatgcagt gaatgtgaca
     1141 aatgctttgg ctacaaaggc agtctgagaa ttcatcagag agttcataca ggagagaaac
     1201 catacaaatg cagtgaatgt gataaatact ttagccagca atccaatctt actattcatc
     1261 agagaattca tacaggagat aaacgataca aatgcagtga atgtgacaaa tgctttggcc
     1321 agctatccaa tcttagtata catcagagaa ttcatacagg agataaacca tacaaatgca
     1381 gtgtttgtga caaatgcttt ggctacaaag gcagtctgaa aattcatcag agaattcatt
     1441 caggagagaa accatacaaa tgcagtgaat gtgacaaata ctttagccag caatccaatc
     1501 ttagtattca tcagaggatt catacaggag ataaacctta caaatgcagt aaatgtgaca
     1561 aatgctttgg ccaccgagtt agtttgagaa ttcatcagag aattcataca ggagagaaac
     1621 caaacaaatg tggtgaatat gacaaatgct ttacccaaaa ctacagtctt tgtttacatc
     1681 agagacttca tatggaagag aaaccttaca aatgtggtga atgtgacata tgctttggtt
     1741 gacagtctca tcttagtatt catcagagaa ttcatttagg acaaaaacct ttcaaatttc
     1801 ctttatgtgg gaaatgcttt acccataagt ctgaattcat cagagaattc atactggaga
     1861 gaaaccatgg aagtgtactg aatgtgacaa atcttttact cacagttact ttgacaattg
     1921 ttgagagaat tcatctagga gaataaattt acaaatgtgt gacaaatact ttatccagaa
     1981 atgcggactt catagaggag agaaacctta gaaatgcagt gaatgtgaca aatgctttac
     2041 ccaaatgtta gcctaaaaag gcatcagaga tttcacaatg aaataataca tgcaagtgta
     2101 atgtatgtga aaattgcatt aactacaatg tctgacagat tacatacagt agagaaacag
     2161 tataaattta gtcaataaaa caataccagc aaatatcgtc ttaaaattca ttagataata
     2221 ttaaaggaga gaaaattttc aaaagtatta gaggtgtgaa ccttttcttt tggcctatct
     2281 cttagaatta acagaatatg tacatgtgac aatctgaaga agtataatgt atttggaaat
     2341 atctttgact acatttcagg tctgagaaaa cattttaaat tttttgtggg gaagtgtatc
     2401 ttggaaaaat tgggcttcca cactagcgaa tttgtatgat tatgaaaact tcagaaacct
     2461 tcatgcagtg ttcaaatctt agaaaatgtc aactatttat gctgagaaaa actctgaaaa
     2521 tatgacaatg taggaaagtt ttcattaaac ttttaccagt tcaccctcaa atattccaag
     2581 atgaagacat gtggggaagt cagaataata tagtgttgtg taacatgttc atggcaacag
     2641 aaattatcta tttcaaaggg acttcactct caaaatatgt aataaaactg gcagcattct
     2701 gtatattcaa gtgatcaaat tcagacaaat tacacttaaa aaggtttatt tgacaaactc
     2761 agataccaaa actgtttgtt ctttatccta taaatatgtc tacagatgtt aagtctcctt
     2821 tgacaatcca gtattcataa ttcttattaa atgctggttt catgtttgag gataa
//
