LOCUS       NM_001399434             668 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus required for excision 1-B domain containing
            (Rex1bd), transcript variant 1, mRNA.
ACCESSION   NM_001399434 XM_006252896
VERSION     NM_001399434.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000016.1.
            
            On Jan 7, 2022 this sequence version replaced XM_006252896.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ221766.1, FQ209730.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-88                JAXUCZ010000016.1  18956023-18956110
            89-171              JAXUCZ010000016.1  18956188-18956270
            172-376             JAXUCZ010000016.1  18956810-18957014
            377-453             JAXUCZ010000016.1  18957750-18957826
            454-668             JAXUCZ010000016.1  18958280-18958494
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p14"
     gene            1..668
                     /gene="Rex1bd"
                     /gene_synonym="RGD1566239"
                     /note="required for excision 1-B domain containing"
                     /db_xref="GeneID:306348"
                     /db_xref="RGD:1566239"
     exon            1..88
                     /gene="Rex1bd"
                     /gene_synonym="RGD1566239"
                     /inference="alignment:Splign:2.1.0"
     CDS             17..526
                     /gene="Rex1bd"
                     /gene_synonym="RGD1566239"
                     /note="isoform 1 is encoded by transcript variant 1;
                     uncharacterized protein C19orf60 homolog"
                     /codon_start=1
                     /product="required for excision 1-B domain-containing
                     protein isoform 1"
                     /protein_id="NP_001386363.1"
                     /db_xref="GeneID:306348"
                     /db_xref="RGD:1566239"
                     /translation="MLTAATEVLAAADGPGSAEPTWAWRDAPIATLVQRIQQLQNERA
                     QAFRRLDQAHRQYLLSDLHHDFPSYRSVVHEVTQAFAAASCEVLAVEAELAGPRAQPV
                     LARHVRNLQELEQTRLATVALLQVMGTPGVSEQDPEKLHQLKIKVIKTMEAISEVLQE
                     LRFDAESAE"
     exon            89..171
                     /gene="Rex1bd"
                     /gene_synonym="RGD1566239"
                     /inference="alignment:Splign:2.1.0"
     exon            172..376
                     /gene="Rex1bd"
                     /gene_synonym="RGD1566239"
                     /inference="alignment:Splign:2.1.0"
     exon            377..453
                     /gene="Rex1bd"
                     /gene_synonym="RGD1566239"
                     /inference="alignment:Splign:2.1.0"
     exon            454..668
                     /gene="Rex1bd"
                     /gene_synonym="RGD1566239"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctggactgc gcagtcatgc tcaccgccgc cacagaggtg ctagctgctg cggatggccc
       61 cgggtctgcg gagcccacgt gggcctggag agatgccccg atcgctacgc tggtgcagag
      121 gatccagcag ctgcagaatg aacgtgcaca ggccttccgc cgtctagacc aagctcaccg
      181 tcagtacctg ctcagtgatc tgcaccatga cttcccgagt taccggagtg tcgtgcatga
      241 ggtgacccag gccttcgccg ctgcctcgtg cgaggtactg gcagtggaag cggagctggc
      301 agggcctcga gcgcaaccgg tgctcgcccg ccacgtgcgc aaccttcaag agctagaaca
      361 gacgcgccta gccacggtgg cgctgctgca ggtgatgggg acaccaggag tgtcagaaca
      421 ggaccctgaa aagttgcacc agctgaagat aaaggtaatt aaaaccatgg aggccatcag
      481 tgaggttctg caggaactca ggtttgatgc cgaatctgcc gagtgagggt ggctccccag
      541 ggaccagagg aagacgggaa aagaggccca tggcgtccgg cccagccctg accgccagct
      601 ggctgaggtc gtgccctgct gggctgccct ccaacgcgcc tcacgcaata aagaattctc
      661 cctctgca
//
