LOCUS       XM_039083580            4033 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus REV1, DNA directed polymerase (Rev1),
            transcript variant X5, mRNA.
ACCESSION   XM_039083580
VERSION     XM_039083580.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086027) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4033
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..4033
                     /gene="Rev1"
                     /gene_synonym="Rev1l"
                     /note="REV1, DNA directed polymerase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 29
                     ESTs, 124 long SRA reads, 1 Protein"
                     /db_xref="GeneID:316344"
                     /db_xref="RGD:1306715"
     CDS             36..3740
                     /gene="Rev1"
                     /gene_synonym="Rev1l"
                     /codon_start=1
                     /product="DNA repair protein REV1 isoform X1"
                     /protein_id="XP_038939508.1"
                     /db_xref="GeneID:316344"
                     /db_xref="RGD:1306715"
                     /translation="MRRGGWRKRAEEDGWEKWGGYMAAKVQKLEEQFRSDAAKQKDGT
                     ASAIFSGVAIYVNGYTDPSAEELRNLMMLHGGQYHVYYSRSKTTHIIATNLPNAKIKE
                     LKGEKVIRPEWIVESIKAGRLLSSVPYQLYTKPSTAQKSLNFTPVCKPEEPVPGPSEI
                     AKQLTNRVNHIIKKIETENEVKANGVSSWNEDSADDGFSSEGLGQTFPGRKQNGVMHP
                     RDTAVIFNGHAHSSNGALKTQDCLVPVDHSVASRLSLDSTQEEKRAEKSSTDFRDCSR
                     QHLQHSTTNADTLCSPHRTSSLSPSLHSNTKINGAHHSTVQGPSSTKSTSALTLSKVA
                     PSVPSKPSDCSFISDFYSRSRLHHISTWKCELTEFVSALQRQRSGVFPGREKLKKVKT
                     GRSSLVVTDTGDMSVLSSPRPQSCVMHVDMDCFFVSVGIRNRPDLKGKPVAVTSNRGT
                     GRAPLRPGANPQLEWQYYQNKLLKGKAADIPDSSVWENQDSAQTNGIDSVLSKAEIAS
                     CSYEARQVGIKNGMFFGHAKQLCPNLQAVPYDFHACREVAQALYETLASYTHSIEAVS
                     CDEALIDVTDILAETKLSPEEFAAALRMEIKNKTQCAASVGIGSNILLARMATKKAKP
                     DGQYHLQPDEVDDFIRGQLVTSLPGVGRSMESKLASLGIKTCGDLQCLTMAKLQKEFG
                     PKTGQMLYRFCRGLDDRPVRTEKERKSVSAEINYGIRFTQPREAEAFLLSLSGEIQSR
                     LEAAGMKGKRLTLKIMVRKPGAPIETAKFGGHGICDNIARTVTLDQATDSAKIIGKAT
                     LNMFHTMKLNISDMRGVGIQVHQLVPANLHPSTCSSRPSAQSSLFSGLPHSVRDLFQL
                     QKAKKPTEEEHNEGLAAVDLEVSSNSRACGLLSPPSAHLATVSPDANRGECSRKWNGL
                     HSPIGGQSRLNLSIEVPSPSQIDQSVLEALPPDIREQVEQAYAAQQGEPRGSKKKEPV
                     NGCSSGVLPHPVGTVLLQIPEPQEPNNSDTRISVIALPAFSQVDPDVFAALPAELQKE
                     LKAAYDQRQRQGEDTTQQQPASTSVPKNPLLQLKPPAMKDKRNKRKNPIGSPRKIQSL
                     PGTSGSPQKLMDGFLQHEERPLEEVSASTPGAQSLSGLQCGSQSSCFRPAAPNLAGAV
                     EFSDVKTLLKEWITTISDPMEEDILQVVKYCTDLIEEKDLEKLDLVIKYMKRLMQQSV
                     ESVWNMAFDFILDNVQVVLQQTYGSTLKVT"
     polyA_site      4033
                     /gene="Rev1"
                     /gene_synonym="Rev1l"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aggccttagg cacctgcttc tacaaaagct ccaccatgag gcgaggtgga tggaggaagc
       61 gagcagagga ggatggctgg gaaaaatggg gcggatacat ggctgccaaa gtccagaagc
      121 tggaggagca gttccgctca gatgcggcta agcagaagga tgggacagcg tctgccatat
      181 ttagtggagt tgccatctac gttaatggat atacagatcc ttctgctgag gaattaagaa
      241 atctaatgat gttgcatgga ggtcaatacc atgtgtatta ttctagatcc aaaacgacac
      301 acatcattgc tacaaatctt cctaatgcca aaattaaaga actaaagggg gaaaaagtaa
      361 ttcgacctga atggattgtg gaaagcatca aagctgggag actcttgtct tctgttccgt
      421 atcaactata caccaagcca tccactgcac agaagagtct caacttcact cctgtgtgca
      481 agcctgagga gcctgtacca ggtccaagcg agatagccaa acagctcacc aacagggtaa
      541 atcacataat taagaagatt gagacagaaa acgaagtgaa agcaaatggc gtgagcagct
      601 ggaatgagga cagcgcagat gacggtttta gttctgaggg tctggggcag acgtttccag
      661 gaaggaaaca gaatggagtg atgcatccca gagacacggc tgtcattttt aatggacatg
      721 ctcacagttc aaatggtgcc ttaaagacgc aggactgctt ggtgcctgtg gaccacagtg
      781 ttgctagcag gctctcttta gattccaccc aggaggaaaa gagggcggag aagagcagca
      841 ctgacttcag agactgcagc aggcagcact tgcagcacag caccacaaat gcagatactt
      901 tgtgcagtcc acacagaact agttctctct caccatcctt gcacagtaac actaaaatca
      961 atggtgctca ccactccact gttcaggggc cttcaagcac aaaaagcact tctgctctga
     1021 ctcttagcaa agtagcgcct tcagtgccat ccaaaccatc ggactgcagc ttcatttcag
     1081 atttctattc ccgttcaaga ctgcatcaca tctctacatg gaagtgtgaa ctgactgagt
     1141 ttgtcagtgc cctacagaga caacgtagtg gtgtctttcc aggaagggaa aagttaaaaa
     1201 aagtgaaaac aggcaggtct tcccttgttg taactgacac aggcgatatg tcagtgttga
     1261 gctcacccag acctcagagc tgtgtaatgc atgttgacat ggattgcttc tttgtatcag
     1321 tgggtatacg aaacagacca gatctcaaag gaaagccagt ggctgttaca agtaacagag
     1381 gcacaggaag ggccccttta cgtcctgggg ctaacccaca gctggagtgg cagtattacc
     1441 agaataaact cctgaaagga aaagcagcag atataccaga ttcctcagta tgggagaatc
     1501 aagattctgc acaaacaaat ggaattgatt ctgttctgtc aaaagctgaa attgcttctt
     1561 gtagttatga agccagacaa gttggcatta agaatggaat gttttttgga catgctaaac
     1621 agctgtgtcc taatctgcag gctgttccgt atgacttcca tgcatgcagg gaagttgccc
     1681 aagcattgta tgaaacactg gcaagctaca cacacagcat tgaagctgtc agttgtgatg
     1741 aagccctgat tgacgtcact gacatccttg cagagactaa actttctcct gaggagtttg
     1801 cagctgccct gcgtatggaa atcaaaaaca agactcagtg tgctgcctct gttgggattg
     1861 gttctaatat tcttcttgct agaatggcaa ctaaaaaagc aaagccggat gggcagtacc
     1921 acctgcagcc agacgaagtc gatgacttca tcagagggca gctcgttacc agcctcccgg
     1981 gagttggacg ttcaatggaa tctaagctag catctttggg aattaagact tgtggagatt
     2041 tgcagtgttt gaccatggca aaactccaga aggaatttgg ccccaagaca gggcagatgt
     2101 tgtataggtt ctgccgaggt ctggacgata gacctgttag aacagagaag gaacgaaaat
     2161 ctgtttcagc cgagatcaac tacggaataa ggttcaccca gcccagagaa gccgaagcct
     2221 tccttctgag tctgtcagga gagattcaaa gccgacttga agctgctggc atgaagggca
     2281 aacgcctgac tctgaagatc atggtacgga agcccggggc ccctatagaa actgcaaaat
     2341 ttggaggcca tggaatttgt gataacatcg ccaggacggt aactctggac caggcaacag
     2401 atagcgcaaa aataattggg aaagctactc tgaacatgtt tcatacaatg aaattaaata
     2461 tttcagacat gagaggggtt ggtattcaag tgcatcagtt ggttcctgct aatttacatc
     2521 cttccacgtg ttcaagtcgt ccatcagctc agtcaagcct cttctctggt ctgccacatt
     2581 ctgtccgtga tctcttccaa cttcagaaag ctaagaaacc cacagaagag gagcacaatg
     2641 aagggctggc tgctgtggat ctggaagtgt cctccaactc tcgagcttgt ggtttattgt
     2701 cacccccatc tgcacatctg gctactgtca gtcctgatgc taacagaggc gagtgttcca
     2761 ggaaatggaa cggcctgcat tctcctattg gtggacagtc aaggttgaac ctcagtatag
     2821 aggtcccatc accgtcccag attgaccagt ctgttttaga agcgctccca cctgatatcc
     2881 gggaacaagt agaacaagct tatgctgctc aacaaggaga gccgcgtggc tctaagaaga
     2941 aagaaccagt aaatggctgc agttcagggg tattgccaca tcctgttggc acagttttgt
     3001 tacaaatacc agagcctcaa gaacctaata acagtgacac cagaatcagc gtgattgccc
     3061 ttccagcgtt ctcacaagtg gaccctgatg tctttgctgc ccttcctgct gagcttcaga
     3121 aggagctgaa agcagcgtat gatcaaagac aaaggcaggg cgaggatacc actcagcagc
     3181 agccagctag tacaagtgtg ccaaagaatc ctttacttca gctaaagcca ccagcaatga
     3241 aagacaagag aaacaagagg aagaacccca ttggttcccc caggaagatt cagagtctgc
     3301 cagggacctc tgggagccct cagaagttaa tggatggttt tctacaacat gaagagagac
     3361 ccctggaaga ggtctccgct tccacccctg gtgcacagag cctgtctggt ctgcagtgcg
     3421 gcagccagag cagctgtttt agaccggcag cacccaacct agctggagct gtggaattca
     3481 gtgatgtgaa gaccttgctt aaagagtgga taactaccat ctcagatcca atggaagaag
     3541 acatcctgca agttgtgaaa tactgcactg accttataga ggaaaaagat ttggaaaaat
     3601 tggatcttgt tataaaatac atgaaaaggt tgatgcagca gtcagtggag tcagtatgga
     3661 acatggcgtt cgactttatt cttgacaatg ttcaggtggt cttacagcag acgtatggaa
     3721 gcacattgaa agtcacctga ctgtccagag agcctggtgc tctctgccca gcagtgcttg
     3781 tgaggtattt gcaaagtgca tgacagtgat gctctgagtt ttcataattc tacatttctt
     3841 tttaagcaag tgttttgtac atttcttttt caaaaaagtg ccaaatttgt cagtattgca
     3901 tgtaaataat tgtgttaatt cttttacttg tagcatagat tctatttaca aaacgtttgt
     3961 ttataaagtt ttatggattt ttacagtgaa gtgtttacag ttgtttaata aagaactgta
     4021 tgtatatttt gta
//
