LOCUS       XM_039083579            4529 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus REV1, DNA directed polymerase (Rev1),
            transcript variant X4, mRNA.
ACCESSION   XM_039083579
VERSION     XM_039083579.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086027) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4529
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..4529
                     /gene="Rev1"
                     /gene_synonym="Rev1l"
                     /note="REV1, DNA directed polymerase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 29
                     ESTs, 124 long SRA reads, 1 Protein"
                     /db_xref="GeneID:316344"
                     /db_xref="RGD:1306715"
     CDS             532..4236
                     /gene="Rev1"
                     /gene_synonym="Rev1l"
                     /codon_start=1
                     /product="DNA repair protein REV1 isoform X1"
                     /protein_id="XP_038939507.1"
                     /db_xref="GeneID:316344"
                     /db_xref="RGD:1306715"
                     /translation="MRRGGWRKRAEEDGWEKWGGYMAAKVQKLEEQFRSDAAKQKDGT
                     ASAIFSGVAIYVNGYTDPSAEELRNLMMLHGGQYHVYYSRSKTTHIIATNLPNAKIKE
                     LKGEKVIRPEWIVESIKAGRLLSSVPYQLYTKPSTAQKSLNFTPVCKPEEPVPGPSEI
                     AKQLTNRVNHIIKKIETENEVKANGVSSWNEDSADDGFSSEGLGQTFPGRKQNGVMHP
                     RDTAVIFNGHAHSSNGALKTQDCLVPVDHSVASRLSLDSTQEEKRAEKSSTDFRDCSR
                     QHLQHSTTNADTLCSPHRTSSLSPSLHSNTKINGAHHSTVQGPSSTKSTSALTLSKVA
                     PSVPSKPSDCSFISDFYSRSRLHHISTWKCELTEFVSALQRQRSGVFPGREKLKKVKT
                     GRSSLVVTDTGDMSVLSSPRPQSCVMHVDMDCFFVSVGIRNRPDLKGKPVAVTSNRGT
                     GRAPLRPGANPQLEWQYYQNKLLKGKAADIPDSSVWENQDSAQTNGIDSVLSKAEIAS
                     CSYEARQVGIKNGMFFGHAKQLCPNLQAVPYDFHACREVAQALYETLASYTHSIEAVS
                     CDEALIDVTDILAETKLSPEEFAAALRMEIKNKTQCAASVGIGSNILLARMATKKAKP
                     DGQYHLQPDEVDDFIRGQLVTSLPGVGRSMESKLASLGIKTCGDLQCLTMAKLQKEFG
                     PKTGQMLYRFCRGLDDRPVRTEKERKSVSAEINYGIRFTQPREAEAFLLSLSGEIQSR
                     LEAAGMKGKRLTLKIMVRKPGAPIETAKFGGHGICDNIARTVTLDQATDSAKIIGKAT
                     LNMFHTMKLNISDMRGVGIQVHQLVPANLHPSTCSSRPSAQSSLFSGLPHSVRDLFQL
                     QKAKKPTEEEHNEGLAAVDLEVSSNSRACGLLSPPSAHLATVSPDANRGECSRKWNGL
                     HSPIGGQSRLNLSIEVPSPSQIDQSVLEALPPDIREQVEQAYAAQQGEPRGSKKKEPV
                     NGCSSGVLPHPVGTVLLQIPEPQEPNNSDTRISVIALPAFSQVDPDVFAALPAELQKE
                     LKAAYDQRQRQGEDTTQQQPASTSVPKNPLLQLKPPAMKDKRNKRKNPIGSPRKIQSL
                     PGTSGSPQKLMDGFLQHEERPLEEVSASTPGAQSLSGLQCGSQSSCFRPAAPNLAGAV
                     EFSDVKTLLKEWITTISDPMEEDILQVVKYCTDLIEEKDLEKLDLVIKYMKRLMQQSV
                     ESVWNMAFDFILDNVQVVLQQTYGSTLKVT"
     polyA_site      4529
                     /gene="Rev1"
                     /gene_synonym="Rev1l"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gggaatcgct tttaacatta atcttatctc tatgtcgtct catgtagaaa aatacacgtt
       61 ttcaaaatga atgtgcttaa atatgtaact acacttcttt accactgaaa aactaagatt
      121 caaaatagga agaaaaaaaa aaaaacctgt tctcaacaac cggtcactgt aaataaattc
      181 cagtgactac atatacctat gtttaacagt caaacacaca gtatttaatg gcttttgaag
      241 tggaaagatc aaagcattta gatatgggct tgaattttgt ctctgctggt atatgaattt
      301 ggacaagctt ttcttttttc ttttttcttt ttttttcgga gctggggacc gaacccaggg
      361 ctttgcgttg gctaggcaat cgctctacca ctgagctaaa tccccaaccc ctggacaagc
      421 ttttcattct tagtttgaag acatcatttt ccagtttggg tagctgacta attacttctt
      481 aaataaaagg catttaatga gactgaatcc acaggtaccc aaagctccac catgaggcga
      541 ggtggatgga ggaagcgagc agaggaggat ggctgggaaa aatggggcgg atacatggct
      601 gccaaagtcc agaagctgga ggagcagttc cgctcagatg cggctaagca gaaggatggg
      661 acagcgtctg ccatatttag tggagttgcc atctacgtta atggatatac agatccttct
      721 gctgaggaat taagaaatct aatgatgttg catggaggtc aataccatgt gtattattct
      781 agatccaaaa cgacacacat cattgctaca aatcttccta atgccaaaat taaagaacta
      841 aagggggaaa aagtaattcg acctgaatgg attgtggaaa gcatcaaagc tgggagactc
      901 ttgtcttctg ttccgtatca actatacacc aagccatcca ctgcacagaa gagtctcaac
      961 ttcactcctg tgtgcaagcc tgaggagcct gtaccaggtc caagcgagat agccaaacag
     1021 ctcaccaaca gggtaaatca cataattaag aagattgaga cagaaaacga agtgaaagca
     1081 aatggcgtga gcagctggaa tgaggacagc gcagatgacg gttttagttc tgagggtctg
     1141 gggcagacgt ttccaggaag gaaacagaat ggagtgatgc atcccagaga cacggctgtc
     1201 atttttaatg gacatgctca cagttcaaat ggtgccttaa agacgcagga ctgcttggtg
     1261 cctgtggacc acagtgttgc tagcaggctc tctttagatt ccacccagga ggaaaagagg
     1321 gcggagaaga gcagcactga cttcagagac tgcagcaggc agcacttgca gcacagcacc
     1381 acaaatgcag atactttgtg cagtccacac agaactagtt ctctctcacc atccttgcac
     1441 agtaacacta aaatcaatgg tgctcaccac tccactgttc aggggccttc aagcacaaaa
     1501 agcacttctg ctctgactct tagcaaagta gcgccttcag tgccatccaa accatcggac
     1561 tgcagcttca tttcagattt ctattcccgt tcaagactgc atcacatctc tacatggaag
     1621 tgtgaactga ctgagtttgt cagtgcccta cagagacaac gtagtggtgt ctttccagga
     1681 agggaaaagt taaaaaaagt gaaaacaggc aggtcttccc ttgttgtaac tgacacaggc
     1741 gatatgtcag tgttgagctc acccagacct cagagctgtg taatgcatgt tgacatggat
     1801 tgcttctttg tatcagtggg tatacgaaac agaccagatc tcaaaggaaa gccagtggct
     1861 gttacaagta acagaggcac aggaagggcc cctttacgtc ctggggctaa cccacagctg
     1921 gagtggcagt attaccagaa taaactcctg aaaggaaaag cagcagatat accagattcc
     1981 tcagtatggg agaatcaaga ttctgcacaa acaaatggaa ttgattctgt tctgtcaaaa
     2041 gctgaaattg cttcttgtag ttatgaagcc agacaagttg gcattaagaa tggaatgttt
     2101 tttggacatg ctaaacagct gtgtcctaat ctgcaggctg ttccgtatga cttccatgca
     2161 tgcagggaag ttgcccaagc attgtatgaa acactggcaa gctacacaca cagcattgaa
     2221 gctgtcagtt gtgatgaagc cctgattgac gtcactgaca tccttgcaga gactaaactt
     2281 tctcctgagg agtttgcagc tgccctgcgt atggaaatca aaaacaagac tcagtgtgct
     2341 gcctctgttg ggattggttc taatattctt cttgctagaa tggcaactaa aaaagcaaag
     2401 ccggatgggc agtaccacct gcagccagac gaagtcgatg acttcatcag agggcagctc
     2461 gttaccagcc tcccgggagt tggacgttca atggaatcta agctagcatc tttgggaatt
     2521 aagacttgtg gagatttgca gtgtttgacc atggcaaaac tccagaagga atttggcccc
     2581 aagacagggc agatgttgta taggttctgc cgaggtctgg acgatagacc tgttagaaca
     2641 gagaaggaac gaaaatctgt ttcagccgag atcaactacg gaataaggtt cacccagccc
     2701 agagaagccg aagccttcct tctgagtctg tcaggagaga ttcaaagccg acttgaagct
     2761 gctggcatga agggcaaacg cctgactctg aagatcatgg tacggaagcc cggggcccct
     2821 atagaaactg caaaatttgg aggccatgga atttgtgata acatcgccag gacggtaact
     2881 ctggaccagg caacagatag cgcaaaaata attgggaaag ctactctgaa catgtttcat
     2941 acaatgaaat taaatatttc agacatgaga ggggttggta ttcaagtgca tcagttggtt
     3001 cctgctaatt tacatccttc cacgtgttca agtcgtccat cagctcagtc aagcctcttc
     3061 tctggtctgc cacattctgt ccgtgatctc ttccaacttc agaaagctaa gaaacccaca
     3121 gaagaggagc acaatgaagg gctggctgct gtggatctgg aagtgtcctc caactctcga
     3181 gcttgtggtt tattgtcacc cccatctgca catctggcta ctgtcagtcc tgatgctaac
     3241 agaggcgagt gttccaggaa atggaacggc ctgcattctc ctattggtgg acagtcaagg
     3301 ttgaacctca gtatagaggt cccatcaccg tcccagattg accagtctgt tttagaagcg
     3361 ctcccacctg atatccggga acaagtagaa caagcttatg ctgctcaaca aggagagccg
     3421 cgtggctcta agaagaaaga accagtaaat ggctgcagtt caggggtatt gccacatcct
     3481 gttggcacag ttttgttaca aataccagag cctcaagaac ctaataacag tgacaccaga
     3541 atcagcgtga ttgcccttcc agcgttctca caagtggacc ctgatgtctt tgctgccctt
     3601 cctgctgagc ttcagaagga gctgaaagca gcgtatgatc aaagacaaag gcagggcgag
     3661 gataccactc agcagcagcc agctagtaca agtgtgccaa agaatccttt acttcagcta
     3721 aagccaccag caatgaaaga caagagaaac aagaggaaga accccattgg ttcccccagg
     3781 aagattcaga gtctgccagg gacctctggg agccctcaga agttaatgga tggttttcta
     3841 caacatgaag agagacccct ggaagaggtc tccgcttcca cccctggtgc acagagcctg
     3901 tctggtctgc agtgcggcag ccagagcagc tgttttagac cggcagcacc caacctagct
     3961 ggagctgtgg aattcagtga tgtgaagacc ttgcttaaag agtggataac taccatctca
     4021 gatccaatgg aagaagacat cctgcaagtt gtgaaatact gcactgacct tatagaggaa
     4081 aaagatttgg aaaaattgga tcttgttata aaatacatga aaaggttgat gcagcagtca
     4141 gtggagtcag tatggaacat ggcgttcgac tttattcttg acaatgttca ggtggtctta
     4201 cagcagacgt atggaagcac attgaaagtc acctgactgt ccagagagcc tggtgctctc
     4261 tgcccagcag tgcttgtgag gtatttgcaa agtgcatgac agtgatgctc tgagttttca
     4321 taattctaca tttcttttta agcaagtgtt ttgtacattt ctttttcaaa aaagtgccaa
     4381 atttgtcagt attgcatgta aataattgtg ttaattcttt tacttgtagc atagattcta
     4441 tttacaaaac gtttgtttat aaagttttat ggatttttac agtgaagtgt ttacagttgt
     4501 ttaataaaga actgtatgta tattttgta
//
