LOCUS       XM_017596446            2582 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus REV1, DNA directed polymerase (Rev1),
            transcript variant X13, mRNA.
ACCESSION   XM_017596446
VERSION     XM_017596446.2
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086027) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_017596446.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2582
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..2582
                     /gene="Rev1"
                     /gene_synonym="Rev1l"
                     /note="REV1, DNA directed polymerase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     ESTs, 109 long SRA reads"
                     /db_xref="GeneID:316344"
                     /db_xref="RGD:1306715"
     CDS             148..2289
                     /gene="Rev1"
                     /gene_synonym="Rev1l"
                     /codon_start=1
                     /product="DNA repair protein REV1 isoform X6"
                     /protein_id="XP_017451935.1"
                     /db_xref="GeneID:316344"
                     /db_xref="RGD:1306715"
                     /translation="MFFGHAKQLCPNLQAVPYDFHACREVAQALYETLASYTHSIEAV
                     SCDEALIDVTDILAETKLSPEEFAAALRMEIKNKTQCAASVGIGSNILLARMATKKAK
                     PDGQYHLQPDEVDDFIRGQLVTSLPGVGRSMESKLASLGIKTCGDLQCLTMAKLQKEF
                     GPKTGQMLYRFCRGLDDRPVRTEKERKSVSAEINYGIRFTQPREAEAFLLSLSGEIQS
                     RLEAAGMKGKRLTLKIMVRKPGAPIETAKFGGHGICDNIARTVTLDQATDSAKIIGKA
                     TLNMFHTMKLNISDMRGVGIQVHQLVPANLHPSTCSSRPSAQSSLFSGLPHSVRDLFQ
                     LQKAKKPTEEEHNEGLAAVDLEVSSNSRACGLLSPPSAHLATVSPDANRGECSRKWNG
                     LHSPIGGQSRLNLSIEVPSPSQIDQSVLEALPPDIREQVEQAYAAQQGEPRGSKKKEP
                     VNGCSSGVLPHPVGTVLLQIPEPQEPNNSDTRISVIALPAFSQVDPDVFAALPAELQK
                     ELKAAYDQRQRQGEDTTQQQPASTSVPKNPLLQLKPPAMKDKRNKRKNPIGSPRKIQS
                     LPGTSGSPQKLMDGFLQHEERPLEEVSASTPGAQSLSGLQCGSQSSCFRPAAPNLAGA
                     VEFSDVKTLLKEWITTISDPMEEDILQVVKYCTDLIEEKDLEKLDLVIKYMKRLMQQS
                     VESVWNMAFDFILDNVQVVLQQTYGSTLKVT"
     polyA_site      2582
                     /gene="Rev1"
                     /gene_synonym="Rev1l"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtccctcaaa gttgtggaac cctggctcct gcccagagtg atgtcctacc atacaatgct
       61 gttggcatct cagccactgc ggagccattg aggagcattg gaattggtca attgggaatt
      121 gggtgacaag ttggcattaa gaatggaatg ttttttggac atgctaaaca gctgtgtcct
      181 aatctgcagg ctgttccgta tgacttccat gcatgcaggg aagttgccca agcattgtat
      241 gaaacactgg caagctacac acacagcatt gaagctgtca gttgtgatga agccctgatt
      301 gacgtcactg acatccttgc agagactaaa ctttctcctg aggagtttgc agctgccctg
      361 cgtatggaaa tcaaaaacaa gactcagtgt gctgcctctg ttgggattgg ttctaatatt
      421 cttcttgcta gaatggcaac taaaaaagca aagccggatg ggcagtacca cctgcagcca
      481 gacgaagtcg atgacttcat cagagggcag ctcgttacca gcctcccggg agttggacgt
      541 tcaatggaat ctaagctagc atctttggga attaagactt gtggagattt gcagtgtttg
      601 accatggcaa aactccagaa ggaatttggc cccaagacag ggcagatgtt gtataggttc
      661 tgccgaggtc tggacgatag acctgttaga acagagaagg aacgaaaatc tgtttcagcc
      721 gagatcaact acggaataag gttcacccag cccagagaag ccgaagcctt ccttctgagt
      781 ctgtcaggag agattcaaag ccgacttgaa gctgctggca tgaagggcaa acgcctgact
      841 ctgaagatca tggtacggaa gcccggggcc cctatagaaa ctgcaaaatt tggaggccat
      901 ggaatttgtg ataacatcgc caggacggta actctggacc aggcaacaga tagcgcaaaa
      961 ataattggga aagctactct gaacatgttt catacaatga aattaaatat ttcagacatg
     1021 agaggggttg gtattcaagt gcatcagttg gttcctgcta atttacatcc ttccacgtgt
     1081 tcaagtcgtc catcagctca gtcaagcctc ttctctggtc tgccacattc tgtccgtgat
     1141 ctcttccaac ttcagaaagc taagaaaccc acagaagagg agcacaatga agggctggct
     1201 gctgtggatc tggaagtgtc ctccaactct cgagcttgtg gtttattgtc acccccatct
     1261 gcacatctgg ctactgtcag tcctgatgct aacagaggcg agtgttccag gaaatggaac
     1321 ggcctgcatt ctcctattgg tggacagtca aggttgaacc tcagtataga ggtcccatca
     1381 ccgtcccaga ttgaccagtc tgttttagaa gcgctcccac ctgatatccg ggaacaagta
     1441 gaacaagctt atgctgctca acaaggagag ccgcgtggct ctaagaagaa agaaccagta
     1501 aatggctgca gttcaggggt attgccacat cctgttggca cagttttgtt acaaatacca
     1561 gagcctcaag aacctaataa cagtgacacc agaatcagcg tgattgccct tccagcgttc
     1621 tcacaagtgg accctgatgt ctttgctgcc cttcctgctg agcttcagaa ggagctgaaa
     1681 gcagcgtatg atcaaagaca aaggcagggc gaggatacca ctcagcagca gccagctagt
     1741 acaagtgtgc caaagaatcc tttacttcag ctaaagccac cagcaatgaa agacaagaga
     1801 aacaagagga agaaccccat tggttccccc aggaagattc agagtctgcc agggacctct
     1861 gggagccctc agaagttaat ggatggtttt ctacaacatg aagagagacc cctggaagag
     1921 gtctccgctt ccacccctgg tgcacagagc ctgtctggtc tgcagtgcgg cagccagagc
     1981 agctgtttta gaccggcagc acccaaccta gctggagctg tggaattcag tgatgtgaag
     2041 accttgctta aagagtggat aactaccatc tcagatccaa tggaagaaga catcctgcaa
     2101 gttgtgaaat actgcactga ccttatagag gaaaaagatt tggaaaaatt ggatcttgtt
     2161 ataaaataca tgaaaaggtt gatgcagcag tcagtggagt cagtatggaa catggcgttc
     2221 gactttattc ttgacaatgt tcaggtggtc ttacagcaga cgtatggaag cacattgaaa
     2281 gtcacctgac tgtccagaga gcctggtgct ctctgcccag cagtgcttgt gaggtatttg
     2341 caaagtgcat gacagtgatg ctctgagttt tcataattct acatttcttt ttaagcaagt
     2401 gttttgtaca tttctttttc aaaaaagtgc caaatttgtc agtattgcat gtaaataatt
     2461 gtgttaattc ttttacttgt agcatagatt ctatttacaa aacgtttgtt tataaagttt
     2521 tatggatttt tacagtgaag tgtttacagt tgtttaataa agaactgtat gtatattttg
     2581 ta
//
