LOCUS       XM_039100479            7403 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus RALBP1 associated Eps domain
            containing 2 (Reps2), transcript variant X11, mRNA.
ACCESSION   XM_039100479
VERSION     XM_039100479.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100479.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7403
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7403
                     /gene="Reps2"
                     /note="RALBP1 associated Eps domain containing 2; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 ESTs, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 65 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:363466"
                     /db_xref="RGD:1561642"
     CDS             148..1857
                     /gene="Reps2"
                     /codon_start=1
                     /product="ralBP1-associated Eps domain-containing protein
                     2 isoform X11"
                     /protein_id="XP_038956407.1"
                     /db_xref="GeneID:363466"
                     /db_xref="RGD:1561642"
                     /translation="MEVAAGGGGGAGPPLLLSDSEQQCYSELFARCAGAASGGPGPGP
                     LEATRVAPGILTAAAGPVADLFRASQLPPETLHQITELCGAKRVGYFGPTQFYVALKL
                     IAAAQAGLPVRTESIKCELPLPRFVMSKNDAEMRVGNPAELHGTKVQIPYLTSEKNSF
                     KRLDDEEKQQETPSPRMSPLASPPSSPPHYQRVPLSHGYSKLRSGTEQMHPAPYESRQ
                     PIGQPEGPSSEGPGTKPFRRQASLIRSFSVERELQENNSNYPDEPWRITEEQREYYVN
                     QFRSLQPDPSSFISGSVAKNFFTKSKLSIAELSYIWELSDADCDGALTLPEFCAAFHL
                     IVARKNGYPLPEGLPPTLQPEYLQAAFPKSKWECVIFDSYSESMPANQQSCDLNRMET
                     SVKDMADFPVSTQDVTTGDDKQAANSGLLPPPPALPPRPCPTQAEPASEADLYPQMNR
                     APSQAAESSPTKKDVPHAQPPSKPIRRKFRPENQTTEGQESAAVVGGAAPAAMVKPHP
                     TVQKQSSKQKKAIQTAIRKNKEANAVLARLNSELQQQLKEVHQERIALENQLEQLRPV
                     TVL"
ORIGIN      
        1 ggcgtgcgct tggaggaagc ggcagcgctg cagctgcggg gcgtgggggc ggcggcttcg
       61 gaggccgagg cggtggtggt ggccctggcg gaggcacgag caccttggcc agggaaggcg
      121 ctcagcccgg actctacaga aggccctatg gaggtggcgg cgggcggagg cggcggtgcg
      181 gggccgccgt tgctgctgag cgatagcgag cagcagtgct actctgagct cttcgcgcgc
      241 tgtgcaggcg ctgcaagcgg gggccccgga cctggccccc tcgaggctac cagggtcgcc
      301 cctggcattc tcactgcggc cgctggtccg gtagccgatc tgtttcgagc gtcgcagctg
      361 ccaccggaga cattgcacca gatcacagaa ctgtgtggtg caaagcgggt tggctatttt
      421 ggaccaaccc agttttacgt tgccctgaaa ttgattgctg cagcacaggc tggcctccct
      481 gtgaggacag agagtattaa atgtgaactg cctctgcctc gctttgtgat gtcgaagaat
      541 gatgctgaga tgcgggttgg gaacccagct gagctgcatg gaacgaaggt tcagattccg
      601 tacttaacat ccgagaaaaa ttccttcaaa agactggatg atgaggagaa acagcaggaa
      661 acaccgtctc ccaggatgtc acccctcgct tcccctcctt cttccccgcc tcattaccag
      721 agggtgccct tgagccatgg ctacagcaaa ctgcggagcg gcacagaaca gatgcatcca
      781 gctccatatg aaagtaggca gcccattggc cagcctgaag gaccctcatc agagggtcca
      841 ggaaccaaac cctttcgtcg tcaggcatct cttattcggt ccttttcagt ggagagagaa
      901 ctgcaggaga acaacagtaa ttacccagat gagccctgga ggataacaga agaacagcgg
      961 gagtactatg tcaatcagtt tcggtccctc cagccagatc cgagttcctt catttcaggg
     1021 tctgtggcca agaacttctt caccaaatca aagctctcta tcgcagaact ctcttatatc
     1081 tgggaactca gtgatgctga ctgtgatgga gccctgacct tgcccgagtt ttgtgctgca
     1141 tttcatctaa ttgtagcccg gaagaacggc tacccactgc cagagggcct gcctccaacc
     1201 ctgcagccag agtacttgca agcagctttc cctaaatcca agtgggagtg cgtgattttt
     1261 gattcttatt ctgaatcaat gccagcaaac caacagtcct gtgacttgaa tcggatggag
     1321 acatctgtta aagacatggc tgactttcct gtctctaccc aagatgtgac tactggtgat
     1381 gacaaacaag ctgctaactc aggattgtta cccccaccac cggcacttcc tccacgacct
     1441 tgtccaacac aggctgaacc ggcatctgaa gctgacttat atcctcagat gaacagagct
     1501 ccttcccaag ctgcagaaag cagtccaaca aagaaggatg taccacatgc tcagcctcca
     1561 tcaaagccca ttcgtaggaa attcagacct gaaaatcaaa ctacagaagg ccaagagtct
     1621 gctgctgtag ttggaggggc agctcctgca gcgatggtga aaccccatcc aacagtacag
     1681 aagcagtctt ccaagcagaa gaaggctatt cagactgcca ttcgcaaaaa taaggaggcc
     1741 aatgcagtac tggcccgctt gaacagtgag cttcagcagc agctgaagga agttcatcaa
     1801 gaacggattg cattggaaaa ccaattggaa caacttcgcc cagtcacagt gttgtgacaa
     1861 cctcaaggct tgagtgacag caggtgacct tgtctgccaa gatctttctt ttgaatattt
     1921 gagcccaact acttgtcata tatgtctgaa tgtcaaatgc tgtgagcagc acaacataat
     1981 ctatatgact ttctcttttg cacttcactt gtgtatttta cagtggtggt aaaatatgtc
     2041 ttcaactgat cattgcactt agaatattaa ctatcagcta ctgggaggct aaagcaggac
     2101 ggtcataagc tcaaggccat tttgagaagc ttcttgagat actgtcttaa atgaaaagta
     2161 aaaagagagg tatgtgtata actcagtggt agagtgcttg cctgatttac aggaagcccc
     2221 tgtttaatcc taaatcccac ttaaaattat acttatcatt ggaatttatc tccaatttta
     2281 accactgctc cttatttaaa ttagtctttt agcagataat tgagagcatt atttatttaa
     2341 agaatttata attttacaga acctattaat gatgtactac caggatgctc attttattct
     2401 tctatgtatg ctaaatacag tccgttggtt tcctggatag tgtgcattcc agctgcatag
     2461 tcttaggctt gatgataata aaaacaaaag ctggaataca ttaaagcatc agatttatcc
     2521 tggcactgtg cctctaccac taaatgccaa aaactgcttc cgtagtacca ttttgatatt
     2581 atgtctgtta tacataatac atgactattg ttttctatga aatatcaaaa ccttactggg
     2641 tctttacacc tctgtgaagt agagattttg gcaatgaact gttgaacttg gccaatctag
     2701 gccatcaacc tagaaaactt agtccttttc atgtaaattt ttgcgcaagc acaatctact
     2761 ttaaatgcct tgcctgatca aattaaataa ataattgcca gatctctgct tttatcccgc
     2821 atgggataac aactttgtaa atgcatgagc ttggaaacaa cccatcaaat attggtagct
     2881 ggatagctac ctatttgttg ttgaatccag gtatccaagc tgagagggga agaaaatagc
     2941 caccaactct gcaacactcc ttggctgttg tcattgtctt tattttagcc tcgatttcaa
     3001 atgtgttact tctgaagata caatgaaaga atgcaatctt cccaccagct ctgcgactgc
     3061 ttgttcggtg caaagtgtac tcttgggaat tattaacatt acatacagtt caggggagct
     3121 tagttaactc tagtggaagt gatataaagc aatcttaaat tgcaaaagca aggatcctgt
     3181 agaaatttag tagtacagcc cagttgaaag taggaaatta ctgacctgtt gggttacagg
     3241 gtccctgaat cactgatctt caacagggca ttgtagtgtt agcacaagtt gcacagggta
     3301 cttttcaaat ggttttggat agatttatag tatgtaagat taagctgttg atttcaatag
     3361 agctgagagt gtttagtaaa aataggcatt tatttaatac ttccctgttc ctttggcaag
     3421 ctctatcagt agcttaacaa cagaaaagtt cagatgatgt ttttccaaag aaaaacaaat
     3481 tgttgactct cttccatgca tatttaagga tttgaatctg atttgatttg gaaagtcacg
     3541 aaacttgaac tatttctgca tttctttttt ccctttggct gccttttttt ggttgttgtt
     3601 gttcttatgg ggagggatca ggaatgagtt taacccctcc taaaattata gttggttcag
     3661 tgcaaattcc taggtgactt cttttttcca tatgctggga tatgggggct gggacagatt
     3721 ttcaacagcg ttatcattgc agatgtttca cagcatgttt ggcattttgt acattcaata
     3781 caggaaagac taacatatgc actttatctc aaaatctccc agtgcatatg cactcacttg
     3841 ggctagcact tcatctccac caactagaca caacctaagg agtgctggtc tactgagcat
     3901 ttgaaaacac tgacatattg tttcccgcat gaagtaaatg acacagggaa ctgcatgaag
     3961 agattagaat tttaaaggac aaaacttgca ttggacaatc aaggccctct gagttccaca
     4021 acctcatcaa tatttacatt gtggtactgg gatcaaatac caggacatca ttcattctag
     4081 gcaaattctg ggccatacct tcagcctttc accaatattt taactgaagc attacattaa
     4141 accgcacacc aatcaatccc tccccccaca cacacatagt acttttagct ggacttaatt
     4201 ttgatcagtt tattagttgt ttagaaatag actcataaaa ggaagtactt atgtttctat
     4261 taaatatata ctactaaata catgttatat gactagtaat gatcttttac ttctgtgttt
     4321 tgttaggatg tgcactttta gggatacagt gcctgataat attttttgag agcctttaat
     4381 atgatatggg gaaaaaacac attgaaatca cttgtagaac tactttggaa tttatctcca
     4441 tttaaccaca aaaaagaagc ttccttgatg aaggataaga gatgaagatt tgcttgtttt
     4501 gcagaattct acagagtgaa ggttaaccct atctccattc atggggcttt aattgccttg
     4561 ttgctcaatg gtctttctgc ctgaggatcc tccagtccta cagatgaaag cacagtagga
     4621 aatgaccatg ggcttattgg ggctttttag catctgtagt aagtagcata cagctttggc
     4681 cagctttcta ttcatagacc taaagcagag cccaaatgat aatagtaaga atggatgtat
     4741 aatgtgacaa tcaagatatt tgctctagtt ggaaagatct aagcagttta taagcatcag
     4801 acaagggttt gggactaatt aagaaatgag ttggcttaga tagaagctgt gctatgtgat
     4861 tattagaact aggcaggacc agcgttcctc atttatagct agcatgagaa aatcacatcc
     4921 ccaagaattg tggactcttg gcccaggaat ccacaataat agatagctag aagtagagtt
     4981 gggatgtagc ctgattttat agattccaag gtagtcctct gtcaatccta aaaatagatt
     5041 agaaagcctt tcctatttat catgttgcat tttattgact taattggtcc ttagatatga
     5101 aagcatcttt gaaggagttt tagatctaga catttctctc agatttaagt aaaaaaataa
     5161 aatttgaggg gaaataatgt tattaaacta ttctaatgct tcacttttga tgatgtagta
     5221 cgttccttta aatcttggca gaactttcca aagctactgt tttcaataga ttccagtccc
     5281 atattcccat gggcacttgc tttctcaagt agactactgt aataaaaatg aactcaatat
     5341 gtaggagctt atagttttct ccagtatatt ggtggttgct cacaaatggt tcattttaac
     5401 acattttagg gataagtaat caaaaacatg aacttccctt ttgtcttccc accaatgtct
     5461 gaactattgt aaaatagtat gtttctttag ctatgttttg attgtatagt atttctaaat
     5521 atttctctgt gttctggatg gtctcataac tgtggccata atagatatta gaagatcact
     5581 tagacaatat ctagaattaa tgtgattctt gcaatcaaga cagacttgca aatgtctttt
     5641 tctaagcagt agttagaaag agctcaatta tagtattgac accttaaagc taaaacattt
     5701 gttcaacaca aacttccatc acaactctga ctagatatca tcaagagaat gtggatttac
     5761 aaacataaaa gcaagaattt accatctctc acaagcagat tgccccatgt gattgacaag
     5821 aaggctcatt gggttgtggt ttgaacattg agggtgtgaa gaaaatgaag cagtggctaa
     5881 agaaatcttc tcctctcact aaatataaca ctagaggctt tcctttctct ttccagatga
     5941 ttattctatt tcaaaagttc ccttaaaatt cagacttcaa cacatcaatt gaatttcttc
     6001 tactctagtt atgggtgtta cagttttttg tgtcatgact cagtgtgtat ggttcaagtt
     6061 cctagtcagg agcagagatc tggatgtgtg tagtccctaa gcctgcacac cttcctcctc
     6121 tttcagcatg gcttgtggag acatcccacc aacatagaca ggttggtcac tgatgatcat
     6181 tttaataaac actgtgggcc attttgcttt gcttgttggt gaaaagaaat gtatctaatt
     6241 atttgaacct ctgaaggatt gtggacaagg aggaccagac tttagaaact atccatgtgg
     6301 attttgagag ctgctgccca gcagaagtct tataaatatg ccttgaagca gtcattttgt
     6361 gattaggagc tgggaagccc aggtatagtt agttttaggc ttgtaggatt acttcctagt
     6421 ttctctaaac acacatggtc gtaaaggatg cattgaaaca ctgcaggttg cagttgacag
     6481 tacctgctct gtctgcaaaa gcctcacttt gctggcaact attggagaat gcttagtttg
     6541 tatgtcttgg gagttttcct tcttgctcct agctaatttc atggctatgg taagttagaa
     6601 atactatgtt tatggctcag gaccagagga caacaggctt taagagggct taaattggga
     6661 ttcgaggact gcagtaagga acccctcaga taccaggttc atagcagtcc gggatgataa
     6721 gactagatcc taaagttctt tcagggagct ctgccatgag actgaacaca gtgtatccat
     6781 cataggccac tttgaccaac taagttgtag tttttgtttc aagtcaactt atatgagaac
     6841 ttccactaca ccgatcttgg gaagtgggga taccctcttc tttagaacta gagctgccat
     6901 tcttttcatc ttcagcacaa gtaaggtatt aagtgagcca gagacaaaaa gagccatttt
     6961 agtcttcata attatctgct aagagagata atgagctgac tgtctatttt aaactcgaag
     7021 gtaaaaaatg tatattatat tttttcacta caggtacatg taacagtaaa aagtgtaaca
     7081 gcaaagtata tatttgatgc tttctgtctt ttcatgatat tgtgctaaca agttgtgcta
     7141 gtattgaact caacctgagt ttcactcatt tgctaagcat tgggaacatt ctgtgtattt
     7201 accttaaaca taaataaatt cctgagagtg tcctatattt ggattgtgat ttgtagactc
     7261 atgctaactt tattgcctct ttttcacact tgttgaaaaa tctgtgaaga acatagtaag
     7321 ttaaggattt ccaacttgga aaaatgtaca cgatgtgaaa ctggggtgct atgttaaaaa
     7381 taaacgtatg ataactcatg ggt
//
