LOCUS       XM_039100469            7644 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus RALBP1 associated Eps domain
            containing 2 (Reps2), transcript variant X1, mRNA.
ACCESSION   XM_039100469
VERSION     XM_039100469.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100469.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7644
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7644
                     /gene="Reps2"
                     /note="RALBP1 associated Eps domain containing 2; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 ESTs, 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     58 samples with support for all annotated introns"
                     /db_xref="GeneID:363466"
                     /db_xref="RGD:1561642"
     CDS             149..2098
                     /gene="Reps2"
                     /codon_start=1
                     /product="ralBP1-associated Eps domain-containing protein
                     2 isoform X1"
                     /protein_id="XP_038956397.1"
                     /db_xref="GeneID:363466"
                     /db_xref="RGD:1561642"
                     /translation="MEVAAGGGGGAGPPLLLSDSEQQCYSELFARCAGAASGGPGPGP
                     LEATRVAPGILTAAAGPVADLFRASQLPPETLHQITELCGAKRVGYFGPTQFYVALKL
                     IAAAQAGLPVRTESIKCELPLPRFVMSKNDAEMRVGNPAELHGTKVQIPYLTSEKNSF
                     KRLDDEEKQQETPSPRMSPLASPPSSPPHYQRVPLSHGYSKLRSGTEQMHPAPYESRQ
                     PIGQPEGPSSEGPGTKPFRRQASLIRSFSVERELQENNSNYPDEPWRITEEQREYYVN
                     QFRSLQPDPSSFISGSVAKNFFTKSKLSIAELSYIWELSDADCDGALTLPEFCAAFHL
                     IVARKNGYPLPEGLPPTLQPEYLQAAFPKSKWECVIFDSYSESMPANQQSCDLNRMEK
                     TSVKDMADFPVSTQDVTTGDDKQALKSTVNESLPKDVSEDTATSKDCNSLKARPRSRS
                     YSSTSIEEAMKRGEDPPTPPPRPQKTHSRASSLDLNKVFQPSVSAANSGLLPPPPALP
                     PRPCPTQAEPASEADLYPQMNRAPSQAAESSPTKKDVPHAQPPSKPIRRKFRPENQTT
                     EGQESAAVVGGAAPAAMVKPHPTVQKQSSKQKKAIQTAIRKNKEANAVLARLNSELQQ
                     QLKEVHQERIALENQLEQLRPVTVL"
ORIGIN      
        1 cggcgtgcgc ttggaggaag cggcagcgct gcagctgcgg ggcgtggggg cggcggcttc
       61 ggaggccgag gcggtggtgg tggccctggc ggaggcacga gcaccttggc cagggaaggc
      121 gctcagcccg gactctacag aaggccctat ggaggtggcg gcgggcggag gcggcggtgc
      181 ggggccgccg ttgctgctga gcgatagcga gcagcagtgc tactctgagc tcttcgcgcg
      241 ctgtgcaggc gctgcaagcg ggggccccgg acctggcccc ctcgaggcta ccagggtcgc
      301 ccctggcatt ctcactgcgg ccgctggtcc ggtagccgat ctgtttcgag cgtcgcagct
      361 gccaccggag acattgcacc agatcacaga actgtgtggt gcaaagcggg ttggctattt
      421 tggaccaacc cagttttacg ttgccctgaa attgattgct gcagcacagg ctggcctccc
      481 tgtgaggaca gagagtatta aatgtgaact gcctctgcct cgctttgtga tgtcgaagaa
      541 tgatgctgag atgcgggttg ggaacccagc tgagctgcat ggaacgaagg ttcagattcc
      601 gtacttaaca tccgagaaaa attccttcaa aagactggat gatgaggaga aacagcagga
      661 aacaccgtct cccaggatgt cacccctcgc ttcccctcct tcttccccgc ctcattacca
      721 gagggtgccc ttgagccatg gctacagcaa actgcggagc ggcacagaac agatgcatcc
      781 agctccatat gaaagtaggc agcccattgg ccagcctgaa ggaccctcat cagagggtcc
      841 aggaaccaaa ccctttcgtc gtcaggcatc tcttattcgg tccttttcag tggagagaga
      901 actgcaggag aacaacagta attacccaga tgagccctgg aggataacag aagaacagcg
      961 ggagtactat gtcaatcagt ttcggtccct ccagccagat ccgagttcct tcatttcagg
     1021 gtctgtggcc aagaacttct tcaccaaatc aaagctctct atcgcagaac tctcttatat
     1081 ctgggaactc agtgatgctg actgtgatgg agccctgacc ttgcccgagt tttgtgctgc
     1141 atttcatcta attgtagccc ggaagaacgg ctacccactg ccagagggcc tgcctccaac
     1201 cctgcagcca gagtacttgc aagcagcttt ccctaaatcc aagtgggagt gcgtgatttt
     1261 tgattcttat tctgaatcaa tgccagcaaa ccaacagtcc tgtgacttga atcggatgga
     1321 gaagacatct gttaaagaca tggctgactt tcctgtctct acccaagatg tgactactgg
     1381 tgatgacaaa caagctttga aaagtactgt taatgaatcc ttaccaaagg acgtatctga
     1441 ggatacagca acttctaagg actgcaacag tctcaaagca agaccaagat ccagatctta
     1501 ctctagcacc tccatagaag aggccatgaa aaggggtgag gaccctccca ccccaccacc
     1561 acggccacag aaaacccatt ccagagcctc ctccttggat ctgaataaag tcttccagcc
     1621 cagcgtttca gctgctaact caggattgtt acccccacca ccggcacttc ctccacgacc
     1681 ttgtccaaca caggctgaac cggcatctga agctgactta tatcctcaga tgaacagagc
     1741 tccttcccaa gctgcagaaa gcagtccaac aaagaaggat gtaccacatg ctcagcctcc
     1801 atcaaagccc attcgtagga aattcagacc tgaaaatcaa actacagaag gccaagagtc
     1861 tgctgctgta gttggagggg cagctcctgc agcgatggtg aaaccccatc caacagtaca
     1921 gaagcagtct tccaagcaga agaaggctat tcagactgcc attcgcaaaa ataaggaggc
     1981 caatgcagta ctggcccgct tgaacagtga gcttcagcag cagctgaagg aagttcatca
     2041 agaacggatt gcattggaaa accaattgga acaacttcgc ccagtcacag tgttgtgaca
     2101 acctcaaggc ttgagtgaca gcaggtgacc ttgtctgcca agatctttct tttgaatatt
     2161 tgagcccaac tacttgtcat atatgtctga atgtcaaatg ctgtgagcag cacaacataa
     2221 tctatatgac tttctctttt gcacttcact tgtgtatttt acagtggtgg taaaatatgt
     2281 cttcaactga tcattgcact tagaatatta actatcagct actgggaggc taaagcagga
     2341 cggtcataag ctcaaggcca ttttgagaag cttcttgaga tactgtctta aatgaaaagt
     2401 aaaaagagag gtatgtgtat aactcagtgg tagagtgctt gcctgattta caggaagccc
     2461 ctgtttaatc ctaaatccca cttaaaatta tacttatcat tggaatttat ctccaatttt
     2521 aaccactgct ccttatttaa attagtcttt tagcagataa ttgagagcat tatttattta
     2581 aagaatttat aattttacag aacctattaa tgatgtacta ccaggatgct cattttattc
     2641 ttctatgtat gctaaataca gtccgttggt ttcctggata gtgtgcattc cagctgcata
     2701 gtcttaggct tgatgataat aaaaacaaaa gctggaatac attaaagcat cagatttatc
     2761 ctggcactgt gcctctacca ctaaatgcca aaaactgctt ccgtagtacc attttgatat
     2821 tatgtctgtt atacataata catgactatt gttttctatg aaatatcaaa accttactgg
     2881 gtctttacac ctctgtgaag tagagatttt ggcaatgaac tgttgaactt ggccaatcta
     2941 ggccatcaac ctagaaaact tagtcctttt catgtaaatt tttgcgcaag cacaatctac
     3001 tttaaatgcc ttgcctgatc aaattaaata aataattgcc agatctctgc ttttatcccg
     3061 catgggataa caactttgta aatgcatgag cttggaaaca acccatcaaa tattggtagc
     3121 tggatagcta cctatttgtt gttgaatcca ggtatccaag ctgagagggg aagaaaatag
     3181 ccaccaactc tgcaacactc cttggctgtt gtcattgtct ttattttagc ctcgatttca
     3241 aatgtgttac ttctgaagat acaatgaaag aatgcaatct tcccaccagc tctgcgactg
     3301 cttgttcggt gcaaagtgta ctcttgggaa ttattaacat tacatacagt tcaggggagc
     3361 ttagttaact ctagtggaag tgatataaag caatcttaaa ttgcaaaagc aaggatcctg
     3421 tagaaattta gtagtacagc ccagttgaaa gtaggaaatt actgacctgt tgggttacag
     3481 ggtccctgaa tcactgatct tcaacagggc attgtagtgt tagcacaagt tgcacagggt
     3541 acttttcaaa tggttttgga tagatttata gtatgtaaga ttaagctgtt gatttcaata
     3601 gagctgagag tgtttagtaa aaataggcat ttatttaata cttccctgtt cctttggcaa
     3661 gctctatcag tagcttaaca acagaaaagt tcagatgatg tttttccaaa gaaaaacaaa
     3721 ttgttgactc tcttccatgc atatttaagg atttgaatct gatttgattt ggaaagtcac
     3781 gaaacttgaa ctatttctgc atttcttttt tccctttggc tgcctttttt tggttgttgt
     3841 tgttcttatg gggagggatc aggaatgagt ttaacccctc ctaaaattat agttggttca
     3901 gtgcaaattc ctaggtgact tcttttttcc atatgctggg atatgggggc tgggacagat
     3961 tttcaacagc gttatcattg cagatgtttc acagcatgtt tggcattttg tacattcaat
     4021 acaggaaaga ctaacatatg cactttatct caaaatctcc cagtgcatat gcactcactt
     4081 gggctagcac ttcatctcca ccaactagac acaacctaag gagtgctggt ctactgagca
     4141 tttgaaaaca ctgacatatt gtttcccgca tgaagtaaat gacacaggga actgcatgaa
     4201 gagattagaa ttttaaagga caaaacttgc attggacaat caaggccctc tgagttccac
     4261 aacctcatca atatttacat tgtggtactg ggatcaaata ccaggacatc attcattcta
     4321 ggcaaattct gggccatacc ttcagccttt caccaatatt ttaactgaag cattacatta
     4381 aaccgcacac caatcaatcc ctccccccac acacacatag tacttttagc tggacttaat
     4441 tttgatcagt ttattagttg tttagaaata gactcataaa aggaagtact tatgtttcta
     4501 ttaaatatat actactaaat acatgttata tgactagtaa tgatctttta cttctgtgtt
     4561 ttgttaggat gtgcactttt agggatacag tgcctgataa tattttttga gagcctttaa
     4621 tatgatatgg ggaaaaaaca cattgaaatc acttgtagaa ctactttgga atttatctcc
     4681 atttaaccac aaaaaagaag cttccttgat gaaggataag agatgaagat ttgcttgttt
     4741 tgcagaattc tacagagtga aggttaaccc tatctccatt catggggctt taattgcctt
     4801 gttgctcaat ggtctttctg cctgaggatc ctccagtcct acagatgaaa gcacagtagg
     4861 aaatgaccat gggcttattg gggcttttta gcatctgtag taagtagcat acagctttgg
     4921 ccagctttct attcatagac ctaaagcaga gcccaaatga taatagtaag aatggatgta
     4981 taatgtgaca atcaagatat ttgctctagt tggaaagatc taagcagttt ataagcatca
     5041 gacaagggtt tgggactaat taagaaatga gttggcttag atagaagctg tgctatgtga
     5101 ttattagaac taggcaggac cagcgttcct catttatagc tagcatgaga aaatcacatc
     5161 cccaagaatt gtggactctt ggcccaggaa tccacaataa tagatagcta gaagtagagt
     5221 tgggatgtag cctgatttta tagattccaa ggtagtcctc tgtcaatcct aaaaatagat
     5281 tagaaagcct ttcctattta tcatgttgca ttttattgac ttaattggtc cttagatatg
     5341 aaagcatctt tgaaggagtt ttagatctag acatttctct cagatttaag taaaaaaata
     5401 aaatttgagg ggaaataatg ttattaaact attctaatgc ttcacttttg atgatgtagt
     5461 acgttccttt aaatcttggc agaactttcc aaagctactg ttttcaatag attccagtcc
     5521 catattccca tgggcacttg ctttctcaag tagactactg taataaaaat gaactcaata
     5581 tgtaggagct tatagttttc tccagtatat tggtggttgc tcacaaatgg ttcattttaa
     5641 cacattttag ggataagtaa tcaaaaacat gaacttccct tttgtcttcc caccaatgtc
     5701 tgaactattg taaaatagta tgtttcttta gctatgtttt gattgtatag tatttctaaa
     5761 tatttctctg tgttctggat ggtctcataa ctgtggccat aatagatatt agaagatcac
     5821 ttagacaata tctagaatta atgtgattct tgcaatcaag acagacttgc aaatgtcttt
     5881 ttctaagcag tagttagaaa gagctcaatt atagtattga caccttaaag ctaaaacatt
     5941 tgttcaacac aaacttccat cacaactctg actagatatc atcaagagaa tgtggattta
     6001 caaacataaa agcaagaatt taccatctct cacaagcaga ttgccccatg tgattgacaa
     6061 gaaggctcat tgggttgtgg tttgaacatt gagggtgtga agaaaatgaa gcagtggcta
     6121 aagaaatctt ctcctctcac taaatataac actagaggct ttcctttctc tttccagatg
     6181 attattctat ttcaaaagtt cccttaaaat tcagacttca acacatcaat tgaatttctt
     6241 ctactctagt tatgggtgtt acagtttttt gtgtcatgac tcagtgtgta tggttcaagt
     6301 tcctagtcag gagcagagat ctggatgtgt gtagtcccta agcctgcaca ccttcctcct
     6361 ctttcagcat ggcttgtgga gacatcccac caacatagac aggttggtca ctgatgatca
     6421 ttttaataaa cactgtgggc cattttgctt tgcttgttgg tgaaaagaaa tgtatctaat
     6481 tatttgaacc tctgaaggat tgtggacaag gaggaccaga ctttagaaac tatccatgtg
     6541 gattttgaga gctgctgccc agcagaagtc ttataaatat gccttgaagc agtcattttg
     6601 tgattaggag ctgggaagcc caggtatagt tagttttagg cttgtaggat tacttcctag
     6661 tttctctaaa cacacatggt cgtaaaggat gcattgaaac actgcaggtt gcagttgaca
     6721 gtacctgctc tgtctgcaaa agcctcactt tgctggcaac tattggagaa tgcttagttt
     6781 gtatgtcttg ggagttttcc ttcttgctcc tagctaattt catggctatg gtaagttaga
     6841 aatactatgt ttatggctca ggaccagagg acaacaggct ttaagagggc ttaaattggg
     6901 attcgaggac tgcagtaagg aacccctcag ataccaggtt catagcagtc cgggatgata
     6961 agactagatc ctaaagttct ttcagggagc tctgccatga gactgaacac agtgtatcca
     7021 tcataggcca ctttgaccaa ctaagttgta gtttttgttt caagtcaact tatatgagaa
     7081 cttccactac accgatcttg ggaagtgggg ataccctctt ctttagaact agagctgcca
     7141 ttcttttcat cttcagcaca agtaaggtat taagtgagcc agagacaaaa agagccattt
     7201 tagtcttcat aattatctgc taagagagat aatgagctga ctgtctattt taaactcgaa
     7261 ggtaaaaaat gtatattata ttttttcact acaggtacat gtaacagtaa aaagtgtaac
     7321 agcaaagtat atatttgatg ctttctgtct tttcatgata ttgtgctaac aagttgtgct
     7381 agtattgaac tcaacctgag tttcactcat ttgctaagca ttgggaacat tctgtgtatt
     7441 taccttaaac ataaataaat tcctgagagt gtcctatatt tggattgtga tttgtagact
     7501 catgctaact ttattgcctc tttttcacac ttgttgaaaa atctgtgaag aacatagtaa
     7561 gttaaggatt tccaacttgg aaaaatgtac acgatgtgaa actggggtgc tatgttaaaa
     7621 ataaacgtat gataactcat gggt
//
