LOCUS       XM_039105224            2574 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus RALBP1 associated Eps domain
            containing 1 (Reps1), transcript variant X14, mRNA.
ACCESSION   XM_039105224
VERSION     XM_039105224.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2574
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2574
                     /gene="Reps1"
                     /note="RALBP1 associated Eps domain containing 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 ESTs, 3 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     37 samples with support for all annotated introns"
                     /db_xref="GeneID:292944"
                     /db_xref="RGD:1307131"
     CDS             148..2382
                     /gene="Reps1"
                     /codon_start=1
                     /product="ralBP1-associated Eps domain-containing protein
                     1 isoform X14"
                     /protein_id="XP_038961152.1"
                     /db_xref="GeneID:292944"
                     /db_xref="RGD:1307131"
                     /translation="MELCGATRLGYFGRSQFYIALKLVAVAQSGFPLRVESINTVKDL
                     PLPRFVASKNEQESRHAASYSSDAENQSAYAGVIPPPPGRGQVKKAPGSHDAAQPRPS
                     ADQQEPASPVVSPQQSPPTSPHTWRKHNRHPSGGNSERPLAGPGPFWSPFGDAQSGSS
                     AGDAVWSGHSPPPPQENWVSFADTPPTSALLTMHPASVQDQTTVRTVASATTANEIRR
                     QSSSYDDPWKITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWE
                     LSDFDKDGALTLDEFCAAFHLVVARKNGYDLPEKLPESLMPKLIDLEDSADVGDQPGE
                     VGYPGSPAEAPPSKSPSMPSLNQTWPELNQSSEQWETFSERSSSSQTLTQFDSNIAPA
                     DPDTAIVHPVPIRMTPSKIHMQEMELKRSSGDHTNPTSPLLVKPSDLSEENKINSSVK
                     FPSGNTVADGYSSSDSFPSDPEQIGSNGARQRSHSGASPDNTAPPPPPPRPQPSHSRS
                     SSLDMNRTFAVATGQQQAGVVTHPPAVPPRPQPSQAPGPSVHRPVDADGLITHTSTSP
                     QQIPEQPNFADFSQFEVFAASNVSEEQDSEAEKHPEVLPAEKASDPSSSLRVAQADSK
                     IEEKTAAGVPANVSKGTTPLAPPPKPVRRRLKSEDELRPDVDEHTQKTGVLAAVLASQ
                     PSIPRSVGKDKKAIQASIRRNKETNTVLARLNSELQQQLKDVLEERISLEVQLEQLRP
                     FSHL"
ORIGIN      
        1 actctcttga ctctgcacat ccactcgtct cgtctcttac cgacaaagaa caaatgactc
       61 ctgttgctgc ttgctcacca tggaccctgt tttcccgaag tactagtcgt ctaccttctg
      121 catttgcctt cttttcttta aaagatcatg gagctttgcg gtgcaacaag acttggttat
      181 tttggaagga gtcagttcta cattgctttg aagcttgtag ccgttgccca gtctgggttc
      241 ccactcagag tggagagtat aaacactgta aaggatctcc ctcttccacg atttgttgct
      301 tcaaagaatg agcaagaatc ccgccacgca gcctcctact cttcagacgc tgaaaaccag
      361 agcgcttacg cgggtgtgat cccccctcct cctggtaggg gccaggttaa gaaggcaccc
      421 ggaagccacg atgcggctca gcctcgtccg tctgcagatc agcaggaacc tgcatctcca
      481 gtagtttcac cccagcagtc cccaccgact tctccacaca catggaggaa gcacaatcgc
      541 caccccagtg gggggaatag tgagaggcct cttgcaggac cagggccgtt ctggtcgcct
      601 tttggtgatg cgcaatcagg ctcttctgct ggtgatgcgg tgtggtctgg gcattccccc
      661 cctccacctc aagaaaactg ggtcagtttt gcagatactc caccaaccag tgctctttta
      721 accatgcatc ctgcttctgt ccaggaccag acaacagtac gaactgtagc ctcagccaca
      781 actgccaatg aaatccgtag gcaatccagt agttacgatg atccctggaa aataacagat
      841 gaacaaagac agtattatgt aaatcagttt aaaaccattc agcctgatct gaacggattt
      901 attccagggt ctgcagctaa agagtttttt acaaaatcga aacttcctat tcttgaactt
      961 tctcatattt gggagctctc agacttcgac aaagatggcg cgttgacact ggatgagttc
     1021 tgtgctgctt ttcatctggt agttgctaga aaaaatggct atgacctacc agagaaactc
     1081 cccgaaagcc tgatgcccaa gctgattgac ttggaagact cagcagatgt gggggaccag
     1141 ccaggtgagg taggctatcc aggctctcct gcagaagcac ctccgagcaa gtcaccgtcg
     1201 atgccgtcac tgaaccagac ttggccagag ctgaatcaga gcagtgagca gtgggagaca
     1261 tttagtgaac gctcttcaag ctcacaaact ctgacccaat ttgattctaa cattgcacca
     1321 gctgatcctg ataccgccat tgtgcatcca gttcccattc gtatgactcc aagcaaaatc
     1381 cacatgcagg agatggagct gaaaagaagc agcggtgatc atactaaccc caccagccca
     1441 ttacttgtga agccatctga tctttcagaa gaaaataaaa tcaattcatc agtaaaattt
     1501 ccttctggaa ataccgtagc agatgggtac agtagctcgg actctttccc ttccgacccg
     1561 gagcagattg ggagcaatgg agctcgtcaa aggtctcatt caggagcgtc cccggataac
     1621 actgcaccac cacctccccc tcccaggcca cagccttctc attctagatc atcatcctta
     1681 gatatgaatc ggaccttcgc agttgccaca ggccaacaac aggctggagt tgttacccac
     1741 cctcctgcag tgcctccaag acctcagccc tcacaggcac cgggtccctc tgtccaccgc
     1801 ccagtggatg ccgatggtct aataactcac actagtacct cacctcagca gataccagaa
     1861 caaccaaatt ttgcagattt cagccaattt gaagtattcg ctgcatcaaa tgtctctgaa
     1921 gaacaagaca gtgaagccga aaaacaccct gaggtcttgc cggctgaaaa agcttctgac
     1981 ccctcaagct ctcttcgagt tgcccaagca gacagtaaaa tcgaagaaaa gacagccgct
     2041 ggtgttcctg ccaatgtgag caaaggcaca acacctctgg ctccaccacc aaaacctgtt
     2101 cggagaagat taaagtcaga agatgagttg cggccagatg tggatgagca cacacaaaag
     2161 acaggtgtct tagctgctgt tctagcgtct cagccgtcta tccccagatc tgtggggaaa
     2221 gataagaagg cgatccaggc atcaattaga cgcaataagg agaccaacac cgttctggcc
     2281 agactgaaca gtgaattgca acagcaatta aaggatgtcc ttgaggagag aatttccctg
     2341 gaagttcaac tggaacagct ccgaccgttc tctcacctct aagtgatggc cgttaactgt
     2401 gaactcgccc attctgaagc agtcctgggt tcaaagcctc tttggaaacc caaacattca
     2461 gctcactgct taatcgaaca ttaaatttta tgatttgttt taccctatat gttcaccatt
     2521 gtatttaagt atcttttatt ttttaatttc aataaaaggg tcaggaggac tttc
//
