LOCUS       NM_001014149            1764 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Rattus norvegicus RELT-like 2 (Rell2), mRNA.
ACCESSION   NM_001014149 XM_341601
VERSION     NM_001014149.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1764)
  AUTHORS   Moua,P., Checketts,M., Xu,L.G., Shu,H.B., Reyland,M.E. and
            Cusick,J.K.
  TITLE     RELT family members activate p38 and induce apoptosis by a
            mechanism distinct from TNFR1
  JOURNAL   Biochem Biophys Res Commun 491 (1), 25-32 (2017)
   PUBMED   28688764
REFERENCE   2  (bases 1 to 1764)
  AUTHORS   Manabe,R., Tsutsui,K., Yamada,T., Kimura,M., Nakano,I., Shimono,C.,
            Sanzen,N., Furutani,Y., Fukuda,T., Oguri,Y., Shimamoto,K.,
            Kiyozumi,D., Sato,Y., Sado,Y., Senoo,H., Yamashina,S., Fukuda,S.,
            Kawai,J., Sugiura,N., Kimata,K., Hayashizaki,Y. and Sekiguchi,K.
  TITLE     Transcriptome-based systematic identification of extracellular
            matrix proteins
  JOURNAL   Proc Natl Acad Sci U S A 105 (35), 12849-12854 (2008)
   PUBMED   18757743
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC089946.1.
            
            On Apr 20, 2005 this sequence version replaced XM_341601.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC089946.1, SRR8487226.169237.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132264, SAMD00132266
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18p11"
     gene            1..1764
                     /gene="Rell2"
                     /gene_synonym="RGD1305276"
                     /note="RELT-like 2"
                     /db_xref="GeneID:361313"
                     /db_xref="RGD:1305276"
     exon            1..338
                     /gene="Rell2"
                     /gene_synonym="RGD1305276"
                     /inference="alignment:Splign:2.1.0"
     exon            339..578
                     /gene="Rell2"
                     /gene_synonym="RGD1305276"
                     /inference="alignment:Splign:2.1.0"
     CDS             395..1303
                     /gene="Rell2"
                     /gene_synonym="RGD1305276"
                     /codon_start=1
                     /product="RELT-like protein 2"
                     /protein_id="NP_001014171.1"
                     /db_xref="GeneID:361313"
                     /db_xref="RGD:1305276"
                     /translation="MSEPQPGLEPPQHGLYMLFLLVLVFFLMGLVGFMICHVLKKKGY
                     RCRTSRGSEPDDAQLQPPEDDDVNEDTVERIVRCIIQNEANAEALKEMLGDSEGEGTV
                     QLSSVDATSSLQDGAPSHHHTVHLGSAAPCIHCSRSKRPPLVRQGRSKEGKGRPRPGE
                     TTVFSVGRFRVTHIEKRYGLHEHRDGSPTDRSWGSGGGQEPGVSQVAGGQPRTGTAAI
                     ERLLPEPPPSQAAATHPVQNGRLKDASLVPCTLEGTPGTSAELNVGTRGTGPSPGLPS
                     QEANGQPTKLDTSGQQDSLPPEAGGM"
     exon            579..644
                     /gene="Rell2"
                     /gene_synonym="RGD1305276"
                     /inference="alignment:Splign:2.1.0"
     exon            645..711
                     /gene="Rell2"
                     /gene_synonym="RGD1305276"
                     /inference="alignment:Splign:2.1.0"
     exon            712..897
                     /gene="Rell2"
                     /gene_synonym="RGD1305276"
                     /inference="alignment:Splign:2.1.0"
     exon            898..1270
                     /gene="Rell2"
                     /gene_synonym="RGD1305276"
                     /inference="alignment:Splign:2.1.0"
     exon            1271..1330
                     /gene="Rell2"
                     /gene_synonym="RGD1305276"
                     /inference="alignment:Splign:2.1.0"
     exon            1331..1736
                     /gene="Rell2"
                     /gene_synonym="RGD1305276"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcccaggcc cgcaacgcga gtaggcattt gggaacccag gacggtttcg gaggtgcccc
       61 catccccgcc cccatcccct ccatttccct ggccggagtg gtccggagcc tgtcgcggtt
      121 cccaactggc ccacatcatt ccctcccccc gtctgccgcg gcaccggtat ccgcagccac
      181 cagcccggaa ccggtgaggc ggcaaagggg ggagggggaa gaagcaaggg atgagctccg
      241 ggagggcgtc gggggccctg agccggacga ggacgcccct ggagccggga cccgagccgg
      301 agccggagcc ggagacagaa ccaaaccacc ggtaccggct gcagcccact aaacccagga
      361 ggcgccctgg cccgcgctcg ccccccaggg cctcatgtcg gaaccacagc ctggcctgga
      421 gccgccccaa catgggctgt acatgctctt cctgcttgtg ctggtcttct tcctcatggg
      481 ccttgtaggc ttcatgatct gccacgtgct caagaagaaa ggctaccgct gtcgcacatc
      541 taggggctca gagcctgatg atgcccagct ccagccccct gaagacgatg acgtgaatga
      601 ggacacagta gagcggattg ttcgctgcat catccaaaat gaagccaatg ctgaggcctt
      661 gaaggagatg ctaggggaca gtgaaggaga agggacggta cagctctcca gtgtggatgc
      721 cacctccagc ctgcaggatg gagccccttc tcatcatcac acagtacacc ttggctctgc
      781 agctccttgc atccactgca gccgcagcaa gaggccccca cttgtccgcc agggtcgctc
      841 taaggaagga aaaggccgcc caagacctgg agagaccact gtattctcag tgggcagatt
      901 ccgagtgaca cacattgaga agcgctatgg ccttcatgaa caccgtgatg gttcccctac
      961 agacagaagc tggggctctg gtggaggaca ggaaccaggg gttagtcagg tggctggagg
     1021 gcagcctagg acagggacag ctgccattga gaggctgctc cctgagccac caccctccca
     1081 ggccgcagcc acccacccag tgcagaatgg aagactcaag gatgccagcc tagtcccttg
     1141 tacacttgag gggacccctg gtacctctgc agaactgaac gtgggcacta gagggacagg
     1201 cccaagccca gggctgccta gtcaagaagc aaatggacag ccaaccaaac tggacacctc
     1261 aggtcagcag gactctctac caccagaagc agggggtatg tgaggcgagt ctccctgagc
     1321 tcgagatcag cctcagtctt cactgtgctg atggattacc agcaggcatt gccaggggac
     1381 agccagccag gaagactctc ccctccgctg gccagctctg ccgctcagct gagggaccag
     1441 ctctacttca tctggagatg gtcctgactg agggacctca ggaggagccc ctcgcacttc
     1501 ctggcccctc atcttttccc tttccccacc tgccaacagg ttgcctggcc tgccttcccc
     1561 aaaacctcgc tccacatgct agagcgtggc agctgggacc aggccctacc ctcggtgggc
     1621 ccctaaagca atagcacctt aggctccctg ccgtcttggc acaagaggcc caagccctgt
     1681 cttggacttc atacccttta ttcactgtca ataaatccgc tcagaccatt acagttaaaa
     1741 aaaaaaaaaa aaaaaaaaaa aaaa
//
