LOCUS       XM_039097000            2811 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus receptor accessory protein 5 (Reep5),
            transcript variant X1, mRNA.
ACCESSION   XM_039097000
VERSION     XM_039097000.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039097000.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2811
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2811
                     /gene="Reep5"
                     /gene_synonym="Dp1"
                     /note="receptor accessory protein 5; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 95
                     ESTs, 18 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     110 samples with support for all annotated introns"
                     /db_xref="GeneID:364838"
                     /db_xref="RGD:1306047"
     CDS             90..572
                     /gene="Reep5"
                     /gene_synonym="Dp1"
                     /codon_start=1
                     /product="receptor expression-enhancing protein 5 isoform
                     X1"
                     /protein_id="XP_038952928.1"
                     /db_xref="GeneID:364838"
                     /db_xref="RGD:1306047"
                     /translation="MVLGSFFVHTGVIGLVALYLVFGYGASLLCNLIGFGYPAYISMK
                     AIESPNKDDDTQWLTYWVVYGVFSIAEFFSDLFLSWFPFYYMLKCGFLLWCMAPSPSN
                     GAELLYRRVIRPIFLKHESQVDSVVKDVKDKAKETADAISKEVKKATVNLLGDEKKST
                     "
ORIGIN      
        1 gaagcaggaa gtgtggggac agctcagtga taaggagccg caccagtcag cttgctgagc
       61 gccagagaac agcctgactt caacaacaaa tggtgttggg ttcgttcttt gtccacactg
      121 gtgtcatcgg actggtggct ttgtatctgg tgttcggtta tggagcctct ctcctctgca
      181 acctgatagg tttcggatac ccagcctaca tctcaatgaa agccatcgag agccccaaca
      241 aagatgatga cacccagtgg ctgacgtact gggtggtgta tggtgtgttc agcatcgccg
      301 agttcttctc cgaccttttc ctgtcctggt tccccttcta ctacatgctg aagtgcggct
      361 tcctgttgtg gtgcatggct cccagcccgt ccaacggggc tgaactgctg taccggcgtg
      421 tcatccgtcc catcttcctg aagcacgagt cccaggtaga cagtgtggtg aaggacgtga
      481 aggacaaagc caaagagact gcagacgcca tcagcaaaga agtcaagaag gctacggtga
      541 acttgctggg cgacgagaag aagagcacct gagtcctggc tgggcggccc ctcccccact
      601 caccccctta gagctccgtg ttatgctagg gacagtggca caggtgttgg ataatgttgc
      661 cttggaaact ttctgatgta ttaaaaatgg aatgtgttgt aaggtgtttc gcttttattg
      721 tcatatatgt agggaacgtt ttcatttaaa tctaacagag tgggcagtac ctaaaatttt
      781 taaatatgag tctgaagaca cgtcactata ttccaggaaa ttcaaaccga gattggaaat
      841 ctctgtccgt aggccctgtg ctctgcgggg ctcacctgca tgcgtcttcc tgtgcttaca
      901 gtttggaaac ctttgtgttg tgcttcactc ggtgtatgat tttatatagt tctgtgtttt
      961 aatgtatctg tgtatataca tatatatgga aaatgttata gtttggctag aacatgcgta
     1021 gtgcttgtga gaagaggcca aggaaggttg cagacaccac ctgtgacctg tgaagcaaga
     1081 tccccccccc cccaaggctg gaatgctgtc gtgatgagtg cacttccaaa taccatttca
     1141 gaaagtgata cagatgggat tggggattta gctcagtggt agagcgcttg cctaggaagc
     1201 gcaaggccct gggttcggtc cccagctctg aaaaaaagag ccaaaaaaaa aaaaaagtga
     1261 tacagatgag taagacatcc catcccccaa gacagcccat cccccaagac agcccatccc
     1321 ccaagacttc ccaccccccc aagacagccc atcccccaag acagcccacc tcccaagact
     1381 tcccgcctcc cattgcatac ctcagttttt aaaaacatga tcccatgtag cccaggagaa
     1441 ctctgaagtc ctgatcctcc tgctgcctcc acctcccagc ttctgctcac tgcaggctgg
     1501 tgccccatgg tggcttacgt gtgccgtctt gttcgtgtaa cagcacattg tatactgata
     1561 gcatccagct ctaagagcag ttctggacaa gtgaggggca gcggcggctg ggatgaactt
     1621 ttcactcttt gtttttatgg ccaacctcaa gaggtctccc tactttataa tttgtaatta
     1681 ttagcattcc cttacagatg cttcagtcta tgtttcgttt aagtgaccgc ctgtcaaagt
     1741 ggcttgctgg gtcagaggtt tggatctaag agtctgtgct ttgcacctca ggccagcttt
     1801 tcagcctttg agttggtctg aaggagctgt ctgccaaagc caacagcagg agttaccttc
     1861 aggacaatgg gcaatgattc tcctacagat gactcagatc acaataatat acaatactaa
     1921 caatacaaaa taagagggtc acagggttcg ttttcctggg aatactagta atcattaggc
     1981 atcttctgac ttaaggtggg gggatctttt tagaaaataa aaacagttgt ttatagaaaa
     2041 ccaattgtta ggtcttaaaa atatttaggt ccttataagt aaaagcacgt ttttcttgtt
     2101 ggcagagtga aaattaacat cgacgatgta atctataaga acagtgttaa tatacaacat
     2161 actctatgtg aggggatggg caggcaggga ctcacagtta cttagaggtt cttggtggaa
     2221 acactgctgc agtgaagtaa accccaaaag caattttgcc ctatcaaccc cacagctttc
     2281 accagagcag gcgccgggaa gtcattactt ctagcagctg ttagtaggag aaatcattga
     2341 cttctgcctg cccgtccttc ccaaataaaa cagtgtcatg actacgagtg ttgacagtga
     2401 gctggctgga aacaaagtgt ttatttgtat ctgagtggta tttcaaagac atataaagtt
     2461 ccagaattct tgctacactt taaagcttgc tgttgtaggg caattctttc ctgtcagtca
     2521 tttggactgc attgctgctg ttgtggggaa gaatcctcca tccacacctc agaaaacagt
     2581 cacggcctaa ataaaatatc gcctggcctc agatgtgaat aggagtgccc gggccttcct
     2641 tacgtgttcc cagactcccc tggctgccat acctggagag aacactgaac tctgtgtgga
     2701 ctgttccttc ctgtgcgtgt atctctgaca aaagttactg actggacaaa gtgagaatga
     2761 gaattacaac atatactcaa ataaagatta tgtttatgtg gtctgtcaag a
//
